RNA–Protein interactions for RNA: ENST00000405742.7

TCN2-202, Transcript of transcobalamin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCN2, Length 1,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-202ENST00000405742 SNX14Q9Y5W7 946 aa17.18■□□□□ 0.34
TCN2-202ENST00000405742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.18■□□□□ 0.34
TCN2-202ENST00000405742 TJP1Q07157 1748 aa17.18■□□□□ 0.34
TCN2-202ENST00000405742 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
TCN2-202ENST00000405742 TLR7Q9NYK1 1049 aaKnown RBP17.17■□□□□ 0.34
TCN2-202ENST00000405742 BRPF3Q9ULD4 1205 aa17.17■□□□□ 0.34
TCN2-202ENST00000405742 H7C1W4 665 aa17.16■□□□□ 0.34
TCN2-202ENST00000405742 PKP1Q13835 747 aa17.16■□□□□ 0.34
TCN2-202ENST00000405742 JARID2Q92833 1246 aaPredicted RBP17.16■□□□□ 0.34
TCN2-202ENST00000405742 CWC25Q9NXE8 425 aaPredicted RBP17.16■□□□□ 0.34
TCN2-202ENST00000405742 COL14A1Q05707 1796 aaKnown RBP17.16■□□□□ 0.34
TCN2-202ENST00000405742 A1BGP04217 495 aa17.15■□□□□ 0.34
TCN2-202ENST00000405742 TTLL7Q6ZT98 887 aa17.15■□□□□ 0.34
TCN2-202ENST00000405742 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
TCN2-202ENST00000405742 TNNI3KQ59H18 835 aa17.15■□□□□ 0.34
TCN2-202ENST00000405742 BOLA2Q9H3K6 86 aa17.15■□□□□ 0.34
TCN2-202ENST00000405742 FPGT-TNNI3KV9GXZ4 949 aa17.15■□□□□ 0.34
TCN2-202ENST00000405742 MCTP1Q6DN14 999 aa17.14■□□□□ 0.33
TCN2-202ENST00000405742 NOL8Q76FK4 1167 aaKnown RBP17.14■□□□□ 0.33
TCN2-202ENST00000405742 CCDC191Q8NCU4 936 aa17.14■□□□□ 0.33
TCN2-202ENST00000405742 FSD1Q9BTV5 496 aa17.14■□□□□ 0.33
TCN2-202ENST00000405742 SNRKQ9NRH2 765 aa17.14■□□□□ 0.33
TCN2-202ENST00000405742 ZDHHC9Q9Y397 364 aa17.14■□□□□ 0.33
TCN2-202ENST00000405742 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
TCN2-202ENST00000405742 TFCP2Q12800 502 aa17.13■□□□□ 0.33
TCN2-202ENST00000405742 KLHL40Q2TBA0 621 aa17.13■□□□□ 0.33
TCN2-202ENST00000405742 LMBR1LQ6UX01 489 aa17.13■□□□□ 0.33
TCN2-202ENST00000405742 RASEFQ8IZ41 740 aa17.13■□□□□ 0.33
TCN2-202ENST00000405742 TTC14Q96N46 770 aa17.13■□□□□ 0.33
TCN2-202ENST00000405742 ATP5JP18859 108 aa17.13■□□□□ 0.33
TCN2-202ENST00000405742 FOXO4P98177 505 aa17.13■□□□□ 0.33
TCN2-202ENST00000405742 PTH1RQ03431 593 aa17.13■□□□□ 0.33
TCN2-202ENST00000405742 NMIQ13287 307 aaPredicted RBP17.13■□□□□ 0.33
TCN2-202ENST00000405742 KCNB2Q92953 911 aa17.13■□□□□ 0.33
TCN2-202ENST00000405742 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
TCN2-202ENST00000405742 PLCH1Q4KWH8 1693 aa17.12■□□□□ 0.33
TCN2-202ENST00000405742 ZBTB3Q9H5J0 574 aa17.12■□□□□ 0.33
TCN2-202ENST00000405742 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
TCN2-202ENST00000405742 DBNLQ9UJU6 430 aaKnown RBP17.12■□□□□ 0.33
TCN2-202ENST00000405742 DDX49Q9Y6V7 483 aaKnown RBP17.12■□□□□ 0.33
TCN2-202ENST00000405742 ITGB4P16144 1822 aa17.12■□□□□ 0.33
TCN2-202ENST00000405742 RFX7Q2KHR2 1363 aa17.12■□□□□ 0.33
TCN2-202ENST00000405742 MRE11P49959 708 aa17.11■□□□□ 0.33
TCN2-202ENST00000405742 VSIG10Q8N0Z9 540 aa17.11■□□□□ 0.33
TCN2-202ENST00000405742 TM6SF1Q9BZW5 370 aa17.11■□□□□ 0.33
TCN2-202ENST00000405742 BRD1O95696 1058 aa17.11■□□□□ 0.33
TCN2-202ENST00000405742 ZKSCAN1P17029 563 aaPredicted RBP17.11■□□□□ 0.33
TCN2-202ENST00000405742 PRPF40BQ6NWY9 871 aaKnown RBP17.11■□□□□ 0.33
TCN2-202ENST00000405742 FAM227BQ96M60 508 aa17.11■□□□□ 0.33
TCN2-202ENST00000405742 COL22A1Q8NFW1 1626 aaPredicted RBP17.11■□□□□ 0.33
TCN2-202ENST00000405742 DISP2A7MBM2 1401 aa17.1■□□□□ 0.33
TCN2-202ENST00000405742 LRP6O75581 1613 aa17.1■□□□□ 0.33
TCN2-202ENST00000405742 CASTP20810 708 aaKnown RBP17.1■□□□□ 0.33
TCN2-202ENST00000405742 AK2P54819 239 aa17.1■□□□□ 0.33
TCN2-202ENST00000405742 NECTIN1Q15223 517 aa17.1■□□□□ 0.33
TCN2-202ENST00000405742 MAP4K1Q92918 833 aa17.1■□□□□ 0.33
TCN2-202ENST00000405742 LIMCH1Q9UPQ0 1083 aa17.1■□□□□ 0.33
TCN2-202ENST00000405742 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
TCN2-202ENST00000405742 MED23Q9ULK4 1368 aa17.1■□□□□ 0.33
TCN2-202ENST00000405742 ROBO1Q9Y6N7 1651 aa17.1■□□□□ 0.33
TCN2-202ENST00000405742 XRCC6P12956 609 aaKnown RBP eCLIP17.09■□□□□ 0.33
TCN2-202ENST00000405742 KCNJ4P48050 445 aa17.09■□□□□ 0.33
TCN2-202ENST00000405742 LMBRD1Q9NUN5 540 aa17.09■□□□□ 0.33
TCN2-202ENST00000405742 RBM8AQ9Y5S9 174 aaKnown RBP17.09■□□□□ 0.33
TCN2-202ENST00000405742 A0A0D9SFI3 127 aa17.09■□□□□ 0.33
TCN2-202ENST00000405742 VPS53Q5VIR6 699 aa17.09■□□□□ 0.33
TCN2-202ENST00000405742 GPR108Q9NPR9 543 aa17.09■□□□□ 0.33
TCN2-202ENST00000405742 AHDC1Q5TGY3 1603 aaPredicted RBP17.09■□□□□ 0.33
TCN2-202ENST00000405742 WNK3Q9BYP7 1800 aa17.08■□□□□ 0.33
TCN2-202ENST00000405742 PIGBQ92521 554 aa17.08■□□□□ 0.33
TCN2-202ENST00000405742 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.33
TCN2-202ENST00000405742 ARXQ96QS3 562 aa17.08■□□□□ 0.33
TCN2-202ENST00000405742 ISCA1Q9BUE6 129 aa17.08■□□□□ 0.33
TCN2-202ENST00000405742 ZSWIM6Q9HCJ5 1215 aa17.08■□□□□ 0.33
TCN2-202ENST00000405742 ATG3Q9NT62 314 aa17.08■□□□□ 0.33
TCN2-202ENST00000405742 JCADQ9P266 1359 aa17.08■□□□□ 0.32
TCN2-202ENST00000405742 IL15P40933 162 aaPredicted RBP17.08■□□□□ 0.32
TCN2-202ENST00000405742 RNF20Q5VTR2 975 aa17.08■□□□□ 0.32
TCN2-202ENST00000405742 CREB3L3Q68CJ9 461 aa17.08■□□□□ 0.32
TCN2-202ENST00000405742 DBNDD2Q9BQY9 259 aa17.08■□□□□ 0.32
TCN2-202ENST00000405742 GRPEL1Q9HAV7 217 aa17.08■□□□□ 0.32
TCN2-202ENST00000405742 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.08■□□□□ 0.32
TCN2-202ENST00000405742 CYP46A1Q9Y6A2 500 aa17.08■□□□□ 0.32
TCN2-202ENST00000405742 COL16A1Q07092 1604 aaPredicted RBP17.07■□□□□ 0.32
TCN2-202ENST00000405742 STARD3NLO95772 234 aa17.07■□□□□ 0.32
TCN2-202ENST00000405742 TCIRG1Q13488 830 aa17.07■□□□□ 0.32
TCN2-202ENST00000405742 KIF6Q6ZMV9 814 aa17.07■□□□□ 0.32
TCN2-202ENST00000405742 RUFY3Q7L099 469 aa17.07■□□□□ 0.32
TCN2-202ENST00000405742 PDRG1Q9NUG6 133 aa17.07■□□□□ 0.32
TCN2-202ENST00000405742 WDR33Q9C0J8 1336 aaKnown RBP17.07■□□□□ 0.32
TCN2-202ENST00000405742 PSMA5P28066 241 aa17.06■□□□□ 0.32
TCN2-202ENST00000405742 ATG9AQ7Z3C6 839 aa17.06■□□□□ 0.32
TCN2-202ENST00000405742 DNAJC10Q8IXB1 793 aa17.06■□□□□ 0.32
TCN2-202ENST00000405742 ZSCAN31Q96LW9 406 aaPredicted RBP17.06■□□□□ 0.32
TCN2-202ENST00000405742 HAUS7Q99871 368 aa17.06■□□□□ 0.32
TCN2-202ENST00000405742 ASAP1Q9ULH1 1129 aa17.06■□□□□ 0.32
TCN2-202ENST00000405742 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
TCN2-202ENST00000405742 PRPF40AO75400 957 aaKnown RBP17.06■□□□□ 0.32
TCN2-202ENST00000405742 CIAO1O76071 339 aa17.06■□□□□ 0.32
TCN2-202ENST00000405742 TRIM28Q13263 835 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms