RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 JAKMIP1Q96N16 626 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 NSFL1CQ9UNZ2 370 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 KDM5CP41229 1560 aa13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 UQCRHLA0A096LP55 91 aa13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 FAM83GA6ND36 823 aa13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 B4DLN1 442 aa13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 UQCRHP07919 91 aa13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 HMGB1P09429 215 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 MRPL12P52815 198 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 SMARCA5O60264 1052 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 KRT27Q7Z3Y8 459 aa13.76□□□□□ -0.21
RAPGEF3-204ENST00000405493 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF3-204ENST00000405493 TRIM21P19474 475 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-204ENST00000405493 ALDH1B1P30837 517 aa13.75□□□□□ -0.21
RAPGEF3-204ENST00000405493 ATP2B3Q16720 1220 aa13.75□□□□□ -0.21
RAPGEF3-204ENST00000405493 PPP4R3AQ6IN85 833 aa13.75□□□□□ -0.21
RAPGEF3-204ENST00000405493 MBD5Q9P267 1494 aa13.75□□□□□ -0.21
RAPGEF3-204ENST00000405493 WDR33Q9C0J8 1336 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-204ENST00000405493 PZPP20742 1482 aa13.75□□□□□ -0.21
RAPGEF3-204ENST00000405493 ARGLU1Q9NWB6 273 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF3-204ENST00000405493 ZFYP08048 801 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF3-204ENST00000405493 GRM8O00222 908 aa13.75□□□□□ -0.21
RAPGEF3-204ENST00000405493 BOLA2Q9H3K6 86 aa13.74□□□□□ -0.21
RAPGEF3-204ENST00000405493 CT47A1Q5JQC4 288 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-204ENST00000405493 LARP1BQ659C4 914 aaKnown RBP13.74□□□□□ -0.21
RAPGEF3-204ENST00000405493 ECHDC1Q9NTX5 307 aa13.74□□□□□ -0.21
RAPGEF3-204ENST00000405493 BRPF1P55201 1214 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-204ENST00000405493 SPC24Q8NBT2 197 aa13.74□□□□□ -0.21
RAPGEF3-204ENST00000405493 SH3TC1Q8TE82 1336 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 ZNF790Q6PG37 636 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 DDX21Q9NR30 783 aaKnown RBP eCLIP13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 THRAP3Q9Y2W1 955 aaKnown RBP13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 ZNF213O14771 459 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 FBLN1P23142 703 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 UNC5CLQ8IV45 518 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 NLGN1Q8N2Q7 840 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 CCDC12Q8WUD4 166 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 MAST3O60307 1309 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 ME1P48163 572 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 CCDC66A2RUB6 948 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 RANBP6O60518 1105 aaKnown RBP13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 OFD1O75665 1012 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 CARD10Q9BWT7 1032 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 MAGEC2Q9UBF1 373 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 A2ML1A8K2U0 1454 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 SETQ01105 290 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 DDX17Q92841 729 aaKnown RBP13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 EVI5LQ96CN4 794 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 TNMDQ9H2S6 317 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 SLC52A2Q9HAB3 445 aa13.73□□□□□ -0.21
RAPGEF3-204ENST00000405493 KIF5BP33176 963 aa13.72□□□□□ -0.21
RAPGEF3-204ENST00000405493 ODF2Q5BJF6 829 aa13.72□□□□□ -0.21
RAPGEF3-204ENST00000405493 DPY19L2Q6NUT2 758 aa13.72□□□□□ -0.21
RAPGEF3-204ENST00000405493 CAGE1Q8TC20 777 aa13.72□□□□□ -0.21
RAPGEF3-204ENST00000405493 CCDC8Q9H0W5 538 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF3-204ENST00000405493 TESK2Q96S53 571 aa13.72□□□□□ -0.21
RAPGEF3-204ENST00000405493 RUFY1Q96T51 708 aa13.72□□□□□ -0.21
RAPGEF3-204ENST00000405493 TBC1D2Q9BYX2 928 aa13.72□□□□□ -0.21
RAPGEF3-204ENST00000405493 FILIP1LQ4L180 1135 aa13.71□□□□□ -0.21
RAPGEF3-204ENST00000405493 CASTP20810 708 aaKnown RBP13.71□□□□□ -0.21
RAPGEF3-204ENST00000405493 LMBR1LQ6UX01 489 aa13.71□□□□□ -0.21
RAPGEF3-204ENST00000405493 KRT85P78386 507 aa13.71□□□□□ -0.21
RAPGEF3-204ENST00000405493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.21
RAPGEF3-204ENST00000405493 CATIPQ7Z7H3 387 aa13.71□□□□□ -0.21
RAPGEF3-204ENST00000405493 PLBD2Q8NHP8 589 aa13.71□□□□□ -0.21
RAPGEF3-204ENST00000405493 CCDC192P0DO97 292 aa13.71□□□□□ -0.22
RAPGEF3-204ENST00000405493 STIM1Q13586 685 aa13.71□□□□□ -0.22
RAPGEF3-204ENST00000405493 ADGBQ8N7X0 1667 aa13.71□□□□□ -0.22
RAPGEF3-204ENST00000405493 CEP131Q9UPN4 1083 aa13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 CERS3Q8IU89 383 aa13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 TTC37Q6PGP7 1564 aa13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 PREX2Q70Z35 1606 aa13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 PATL2C9JE40 543 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 GRM1Q13255 1194 aa13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 LARGE2Q8N3Y3 721 aa13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 RAB34Q9BZG1 259 aa13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 ARHGAP31Q2M1Z3 1444 aa13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 SMARCE1Q969G3 411 aa13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 VEZTQ9HBM0 779 aa13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 PLXNC1O60486 1568 aa13.7□□□□□ -0.22
RAPGEF3-204ENST00000405493 NAA16Q6N069 864 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 SPATA32Q96LK8 384 aa13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 SCLT1Q96NL6 688 aa13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 SERPINC1P01008 464 aa13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 ANXA1P04083 346 aa13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 PDCL3Q9H2J4 239 aa13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 GJA3Q9Y6H8 435 aa13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 NIM1KQ8IY84 436 aa13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 GGA1Q9UJY5 639 aa13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 NPC1L1Q9UHC9 1359 aa13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 TSPY2A6NKD2 308 aa13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 CCDC191Q8NCU4 936 aa13.69□□□□□ -0.22
RAPGEF3-204ENST00000405493 DPP8Q6V1X1 898 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF3-204ENST00000405493 SH2D4AQ9H788 454 aa13.68□□□□□ -0.22
RAPGEF3-204ENST00000405493 CNKSR1Q969H4 720 aa13.68□□□□□ -0.22
RAPGEF3-204ENST00000405493 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
RAPGEF3-204ENST00000405493 RBM6P78332 1123 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-204ENST00000405493 ZFYVE27Q5T4F4 411 aa13.68□□□□□ -0.22
RAPGEF3-204ENST00000405493 KAT14Q9H8E8 782 aa13.68□□□□□ -0.22
RAPGEF3-204ENST00000405493 GOLIM4O00461 696 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms