RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 ESCO1Q5FWF5 840 aa4.65□□□□□ -1.66
RTN4-209ENST00000405240 RUFY2Q8WXA3 655 aa4.65□□□□□ -1.66
RTN4-209ENST00000405240 EAF2Q96CJ1 260 aaPredicted RBP4.65□□□□□ -1.66
RTN4-209ENST00000405240 ORAI2Q96SN7 254 aa4.65□□□□□ -1.66
RTN4-209ENST00000405240 MTMR6Q9Y217 621 aa4.65□□□□□ -1.66
RTN4-209ENST00000405240 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.65□□□□□ -1.66
RTN4-209ENST00000405240 PLCH1Q4KWH8 1693 aa4.65□□□□□ -1.66
RTN4-209ENST00000405240 MYH3P11055 1940 aa4.65□□□□□ -1.66
RTN4-209ENST00000405240 SYCE3A1L190 88 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 STX6O43752 255 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 TPM2P07951 284 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 PHKG2P15735 406 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 EIF2S2P20042 333 aaKnown RBP4.65□□□□□ -1.67
RTN4-209ENST00000405240 TEFQ10587 303 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 METTL22Q9BUU2 404 aaPredicted RBP4.65□□□□□ -1.67
RTN4-209ENST00000405240 UPF3BQ9BZI7 483 aaKnown RBP4.65□□□□□ -1.67
RTN4-209ENST00000405240 BICC1Q9H694 974 aaKnown RBP4.65□□□□□ -1.67
RTN4-209ENST00000405240 ZKSCAN5Q9Y2L8 839 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 ITGB4P16144 1822 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 ELP1O95163 1332 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 NPHP3Q7Z494 1330 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 UBE2HP62256 183 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 GCKRQ14397 625 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 ZNF790Q6PG37 636 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 CLASRPQ8N2M8 674 aaKnown RBP4.65□□□□□ -1.67
RTN4-209ENST00000405240 FAM184AQ8NB25 1140 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 TSPY26PQ9H489 355 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 AKAP11Q9UKA4 1901 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 DOCK2Q92608 1830 aa4.65□□□□□ -1.67
RTN4-209ENST00000405240 TNS3Q68CZ2 1445 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 RREB1Q92766 1687 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 MAP4K4O95819 1239 aaPredicted RBP4.64□□□□□ -1.67
RTN4-209ENST00000405240 CWF19L2Q2TBE0 894 aaKnown RBP4.64□□□□□ -1.67
RTN4-209ENST00000405240 C1orf141Q5JVX7 400 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 CCDC183Q5T5S1 534 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 CREB3L3Q68CJ9 461 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 RBM43Q6ZSC3 357 aaKnown RBP4.64□□□□□ -1.67
RTN4-209ENST00000405240 SYAP1Q96A49 352 aaPredicted RBP4.64□□□□□ -1.67
RTN4-209ENST00000405240 TRIM44Q96DX7 344 aaPredicted RBP4.64□□□□□ -1.67
RTN4-209ENST00000405240 PALLDQ8WX93 1383 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 SLC27A2O14975 620 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 ANXA1P04083 346 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 ATP5JP18859 108 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 ME3Q16798 604 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 LARP1Q6PKG0 1096 aaKnown RBP4.64□□□□□ -1.67
RTN4-209ENST00000405240 CWC27Q6UX04 472 aaKnown RBP4.64□□□□□ -1.67
RTN4-209ENST00000405240 KRT28Q7Z3Y7 464 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 LRP6O75581 1613 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 LRP5O75197 1615 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 ZBTB22O15209 634 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 PHF14O94880 888 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 NMIQ13287 307 aaPredicted RBP4.64□□□□□ -1.67
RTN4-209ENST00000405240 TOB2Q14106 344 aaPredicted RBP4.64□□□□□ -1.67
RTN4-209ENST00000405240 EPHA10Q5JZY3 1008 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 GPATCH3Q96I76 525 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 PDRG1Q9NUG6 133 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 CCDC39Q9UFE4 941 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 TPCN1Q9ULQ1 816 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 PA2G4Q9UQ80 394 aaKnown RBP4.64□□□□□ -1.67
RTN4-209ENST00000405240 SPG7Q9UQ90 795 aa4.64□□□□□ -1.67
RTN4-209ENST00000405240 STRCQ7RTU9 1775 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 DDX58O95786 925 aaKnown RBP4.63□□□□□ -1.67
RTN4-209ENST00000405240 CASTP20810 708 aaKnown RBP4.63□□□□□ -1.67
RTN4-209ENST00000405240 PTPN12Q05209 780 aaKnown RBP4.63□□□□□ -1.67
RTN4-209ENST00000405240 COL9A3Q14050 684 aaPredicted RBP4.63□□□□□ -1.67
RTN4-209ENST00000405240 FBXL16Q8N461 479 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 TLR7Q9NYK1 1049 aaKnown RBP4.63□□□□□ -1.67
RTN4-209ENST00000405240 HMG20BQ9P0W2 317 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 CNPY2Q9Y2B0 182 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 RBM8AQ9Y5S9 174 aaKnown RBP4.63□□□□□ -1.67
RTN4-209ENST00000405240 ZNF609O15014 1411 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 LAMB2P55268 1798 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 A0A0D9SFI3 127 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 TAF5LO75529 589 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 RPS6KB1P23443 525 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.63□□□□□ -1.67
RTN4-209ENST00000405240 ARXQ96QS3 562 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 AGXT2Q9BYV1 514 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 C19orf44Q9H6X5 657 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 GPR108Q9NPR9 543 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 C9orf78Q9NZ63 289 aaPredicted RBP4.63□□□□□ -1.67
RTN4-209ENST00000405240 CYP46A1Q9Y6A2 500 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 CASZ1Q86V15 1759 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 A0A1B0GUL6 1792 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 RRP9O43818 475 aaKnown RBP4.63□□□□□ -1.67
RTN4-209ENST00000405240 GJB2P29033 226 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 FOXO4P98177 505 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 NKX1-1Q15270 411 aaPredicted RBP4.63□□□□□ -1.67
RTN4-209ENST00000405240 PRPF40BQ6NWY9 871 aaKnown RBP4.63□□□□□ -1.67
RTN4-209ENST00000405240 KIAA1211Q6ZU35 1233 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 AACSQ86V21 672 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 SH3TC1Q8TE82 1336 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 FAM227BQ96M60 508 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 DIAPH3Q9NSV4 1193 aa4.63□□□□□ -1.67
RTN4-209ENST00000405240 H7C1W4 665 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 IFIT2P09913 472 aaKnown RBP4.62□□□□□ -1.67
RTN4-209ENST00000405240 UBE2Q2Q8WVN8 375 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 DCAF5Q96JK2 942 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 HAUS7Q99871 368 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 SPTLC3Q9NUV7 552 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms