RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 ST3GAL1Q11201 340 aa18.8■□□□□ 0.6
TOM1-203ENST00000404284 SCN11AQ9UI33 1791 aa18.8■□□□□ 0.6
TOM1-203ENST00000404284 MRC1P22897 1456 aa18.8■□□□□ 0.6
TOM1-203ENST00000404284 AIMP1Q12904 312 aaKnown RBP18.8■□□□□ 0.6
TOM1-203ENST00000404284 CCDC83Q8IWF9 413 aa18.8■□□□□ 0.6
TOM1-203ENST00000404284 FAM227BQ96M60 508 aa18.8■□□□□ 0.6
TOM1-203ENST00000404284 TLR7Q9NYK1 1049 aaKnown RBP18.8■□□□□ 0.6
TOM1-203ENST00000404284 ZKSCAN5Q9Y2L8 839 aa18.8■□□□□ 0.6
TOM1-203ENST00000404284 KDM6AO15550 1401 aaPredicted RBP18.8■□□□□ 0.6
TOM1-203ENST00000404284 SNRKQ9NRH2 765 aa18.79■□□□□ 0.6
TOM1-203ENST00000404284 CYP46A1Q9Y6A2 500 aa18.79■□□□□ 0.6
TOM1-203ENST00000404284 RBM8AQ9Y5S9 174 aaKnown RBP18.79■□□□□ 0.6
TOM1-203ENST00000404284 GJB2P29033 226 aa18.78■□□□□ 0.6
TOM1-203ENST00000404284 G3BP1Q13283 466 aaKnown RBP eCLIP18.78■□□□□ 0.61e-6■■■□□ 16.4
TOM1-203ENST00000404284 NMIQ13287 307 aaPredicted RBP18.78■□□□□ 0.6
TOM1-203ENST00000404284 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.78■□□□□ 0.6
TOM1-203ENST00000404284 CCDC8Q9H0W5 538 aaPredicted RBP18.78■□□□□ 0.6
TOM1-203ENST00000404284 SH2B1Q9NRF2 756 aaPredicted RBP18.78■□□□□ 0.6
TOM1-203ENST00000404284 MST1RQ04912 1400 aa18.78■□□□□ 0.6
TOM1-203ENST00000404284 CCDC183Q5T5S1 534 aa18.78■□□□□ 0.6
TOM1-203ENST00000404284 ZNF790Q6PG37 636 aa18.78■□□□□ 0.6
TOM1-203ENST00000404284 MAP4K1Q92918 833 aa18.78■□□□□ 0.6
TOM1-203ENST00000404284 ZSCAN31Q96LW9 406 aaPredicted RBP18.78■□□□□ 0.6
TOM1-203ENST00000404284 KIF1AQ12756 1690 aa18.77■□□□□ 0.6
TOM1-203ENST00000404284 UBE2HP62256 183 aa18.77■□□□□ 0.6
TOM1-203ENST00000404284 SLC39A6Q13433 755 aa18.77■□□□□ 0.6
TOM1-203ENST00000404284 CREB3L3Q68CJ9 461 aa18.77■□□□□ 0.6
TOM1-203ENST00000404284 KRT28Q7Z3Y7 464 aa18.77■□□□□ 0.6
TOM1-203ENST00000404284 BCL11BQ9C0K0 894 aaPredicted RBP18.77■□□□□ 0.6
TOM1-203ENST00000404284 CCDC39Q9UFE4 941 aa18.77■□□□□ 0.6
TOM1-203ENST00000404284 MTMR6Q9Y217 621 aa18.77■□□□□ 0.6
TOM1-203ENST00000404284 ALS2Q96Q42 1657 aa18.77■□□□□ 0.6
TOM1-203ENST00000404284 HIP1O00291 1037 aa18.77■□□□□ 0.6
TOM1-203ENST00000404284 BBXQ8WY36 941 aaPredicted RBP18.77■□□□□ 0.6
TOM1-203ENST00000404284 NEURL1BA8MQ27 555 aa18.76■□□□□ 0.59
TOM1-203ENST00000404284 ME3Q16798 604 aa18.76■□□□□ 0.59
TOM1-203ENST00000404284 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
TOM1-203ENST00000404284 A0A0D9SFI3 127 aa18.76■□□□□ 0.59
TOM1-203ENST00000404284 DTNBO60941 627 aa18.76■□□□□ 0.59
TOM1-203ENST00000404284 ZKSCAN1P17029 563 aaPredicted RBP18.76■□□□□ 0.59
TOM1-203ENST00000404284 MCM5P33992 734 aa18.76■□□□□ 0.59
TOM1-203ENST00000404284 COL9A3Q14050 684 aaPredicted RBP18.76■□□□□ 0.59
TOM1-203ENST00000404284 LARP1Q6PKG0 1096 aaKnown RBP18.76■□□□□ 0.59
TOM1-203ENST00000404284 RIC3Q7Z5B4 369 aa18.76■□□□□ 0.59
TOM1-203ENST00000404284 DDX54Q8TDD1 881 aaKnown RBP18.76■□□□□ 0.59
TOM1-203ENST00000404284 SIL1Q9H173 461 aa18.76■□□□□ 0.59
TOM1-203ENST00000404284 SLC52A2Q9HAB3 445 aa18.76■□□□□ 0.59
TOM1-203ENST00000404284 ATP6V1DQ9Y5K8 247 aa18.76■□□□□ 0.59
TOM1-203ENST00000404284 C1orf167Q5SNV9 1468 aa18.75■□□□□ 0.59
TOM1-203ENST00000404284 MED23Q9ULK4 1368 aa18.75■□□□□ 0.59
TOM1-203ENST00000404284 KLHDC4Q8TBB5 520 aa18.75■□□□□ 0.59
TOM1-203ENST00000404284 FIBPO43427 364 aa18.75■□□□□ 0.59
TOM1-203ENST00000404284 SLC27A2O14975 620 aa18.74■□□□□ 0.59
TOM1-203ENST00000404284 GCKRQ14397 625 aa18.74■□□□□ 0.59
TOM1-203ENST00000404284 EPHA10Q5JZY3 1008 aa18.74■□□□□ 0.59
TOM1-203ENST00000404284 FAM184AQ8NB25 1140 aa18.74■□□□□ 0.59
TOM1-203ENST00000404284 BOLA2Q9H3K6 86 aa18.74■□□□□ 0.59
TOM1-203ENST00000404284 TPCN1Q9ULQ1 816 aa18.74■□□□□ 0.59
TOM1-203ENST00000404284 ADAMTSL3P82987 1691 aa18.74■□□□□ 0.59
TOM1-203ENST00000404284 JCADQ9P266 1359 aa18.74■□□□□ 0.59
TOM1-203ENST00000404284 XAGE3Q8WTP9 111 aa18.74■□□□□ 0.59
TOM1-203ENST00000404284 MYL6BP14649 208 aa18.73■□□□□ 0.59
TOM1-203ENST00000404284 MEGF6O75095 1541 aa18.73■□□□□ 0.59
TOM1-203ENST00000404284 TERF1P54274 439 aa18.73■□□□□ 0.59
TOM1-203ENST00000404284 ZC3H6P61129 1189 aaKnown RBP18.73■□□□□ 0.59
TOM1-203ENST00000404284 DNM1Q05193 864 aaKnown RBP18.73■□□□□ 0.59
TOM1-203ENST00000404284 LRP10Q7Z4F1 713 aa18.73■□□□□ 0.59
TOM1-203ENST00000404284 NECAB1Q8N987 351 aa18.73■□□□□ 0.59
TOM1-203ENST00000404284 FSD1Q9BTV5 496 aa18.73■□□□□ 0.59
TOM1-203ENST00000404284 METTL22Q9BUU2 404 aaPredicted RBP18.73■□□□□ 0.59
TOM1-203ENST00000404284 UQCRHLA0A096LP55 91 aa18.72■□□□□ 0.59
TOM1-203ENST00000404284 UQCRHP07919 91 aa18.72■□□□□ 0.59
TOM1-203ENST00000404284 PHKG2P15735 406 aa18.72■□□□□ 0.59
TOM1-203ENST00000404284 KCNJ4P48050 445 aa18.72■□□□□ 0.59
TOM1-203ENST00000404284 NEXNQ0ZGT2 675 aa18.72■□□□□ 0.59
TOM1-203ENST00000404284 UVSSAQ2YD98 709 aa18.72■□□□□ 0.59
TOM1-203ENST00000404284 RAPGEF4Q8WZA2 1011 aa18.72■□□□□ 0.59
TOM1-203ENST00000404284 COPS6Q7L5N1 327 aa18.72■□□□□ 0.59
TOM1-203ENST00000404284 MYD88Q99836 296 aa18.72■□□□□ 0.59
TOM1-203ENST00000404284 LETM1O95202 739 aaPredicted RBP18.71■□□□□ 0.59
TOM1-203ENST00000404284 NFATC2IPQ8NCF5 419 aa18.71■□□□□ 0.59
TOM1-203ENST00000404284 ZNF496Q96IT1 587 aaPredicted RBP18.71■□□□□ 0.59
TOM1-203ENST00000404284 TAF6LQ9Y6J9 622 aa18.71■□□□□ 0.59
TOM1-203ENST00000404284 ZNF589Q86UQ0 364 aaPredicted RBP18.71■□□□□ 0.59
TOM1-203ENST00000404284 ABCC6O95255 1503 aa18.71■□□□□ 0.59
TOM1-203ENST00000404284 PSMA5P28066 241 aa18.7■□□□□ 0.58
TOM1-203ENST00000404284 COL18A1P39060 1754 aa18.7■□□□□ 0.58
TOM1-203ENST00000404284 TPRNQ4KMQ1 711 aa18.7■□□□□ 0.58
TOM1-203ENST00000404284 FUCA2Q9BTY2 467 aa18.7■□□□□ 0.58
TOM1-203ENST00000404284 NLRP2Q9NX02 1062 aa18.7■□□□□ 0.58
TOM1-203ENST00000404284 VPS37CA5D8V6 355 aaPredicted RBP18.7■□□□□ 0.58
TOM1-203ENST00000404284 HCLS1P14317 486 aaPredicted RBP18.7■□□□□ 0.58
TOM1-203ENST00000404284 RFX5P48382 616 aaPredicted RBP18.7■□□□□ 0.58
TOM1-203ENST00000404284 CSPP1Q1MSJ5 1256 aa18.7■□□□□ 0.58
TOM1-203ENST00000404284 COPRSQ9NQ92 184 aa18.7■□□□□ 0.58
TOM1-203ENST00000404284 AFDNP55196 1824 aaKnown RBP18.69■□□□□ 0.58
TOM1-203ENST00000404284 TATP17735 454 aaPredicted RBP18.69■□□□□ 0.58
TOM1-203ENST00000404284 RNF20Q5VTR2 975 aa18.69■□□□□ 0.58
TOM1-203ENST00000404284 BLOC1S2Q6QNY1 142 aa18.69■□□□□ 0.58
TOM1-203ENST00000404284 EDC3Q96F86 508 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms