RNA–Protein interactions for RNA: ENST00000402876.3

PARVB-202, Transcript of parvin beta, humanhuman

TSL 1 (best)

Gene PARVB, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-202ENST00000402876 SMC5Q8IY18 1101 aa24.24■■□□□ 1.47
PARVB-202ENST00000402876 PCCAP05165 728 aaPredicted RBP24.23■■□□□ 1.47
PARVB-202ENST00000402876 SSFA2P28290 1259 aa24.23■■□□□ 1.47
PARVB-202ENST00000402876 CASP7P55210 303 aa24.23■■□□□ 1.47
PARVB-202ENST00000402876 PARP10Q53GL7 1025 aa24.23■■□□□ 1.47
PARVB-202ENST00000402876 MYH3P11055 1940 aa24.23■■□□□ 1.47
PARVB-202ENST00000402876 EP400Q96L91 3159 aa24.23■■□□□ 1.47
PARVB-202ENST00000402876 RFC4P35249 363 aa24.22■■□□□ 1.47
PARVB-202ENST00000402876 MTX1Q13505 466 aa24.22■■□□□ 1.47
PARVB-202ENST00000402876 ARHGEF1Q92888 912 aaKnown RBP24.22■■□□□ 1.47
PARVB-202ENST00000402876 PHF14O94880 888 aa24.21■■□□□ 1.47
PARVB-202ENST00000402876 BAG6P46379 1132 aa24.21■■□□□ 1.47
PARVB-202ENST00000402876 ZBTB38Q8NAP3 1195 aaPredicted RBP24.21■■□□□ 1.47
PARVB-202ENST00000402876 LAMB2P55268 1798 aa24.21■■□□□ 1.47
PARVB-202ENST00000402876 COL24A1Q17RW2 1714 aa24.21■■□□□ 1.47
PARVB-202ENST00000402876 UBN2Q6ZU65 1347 aa24.2■■□□□ 1.46
PARVB-202ENST00000402876 USP42Q9H9J4 1324 aaKnown RBP24.2■■□□□ 1.46
PARVB-202ENST00000402876 PPP1R42Q7Z4L9 355 aa24.2■■□□□ 1.46
PARVB-202ENST00000402876 SSH3Q8TE77 659 aa24.2■■□□□ 1.46
PARVB-202ENST00000402876 BICC1Q9H694 974 aaKnown RBP24.2■■□□□ 1.46
PARVB-202ENST00000402876 DCTPP1Q9H773 170 aa24.2■■□□□ 1.46
PARVB-202ENST00000402876 CDHR2Q9BYE9 1310 aa24.19■■□□□ 1.46
PARVB-202ENST00000402876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.19■■□□□ 1.46
PARVB-202ENST00000402876 PNMA6EA0A0J9YXQ4 647 aa24.19■■□□□ 1.46
PARVB-202ENST00000402876 SRGAP3O43295 1099 aa24.19■■□□□ 1.46
PARVB-202ENST00000402876 POLA2Q14181 598 aa24.19■■□□□ 1.46
PARVB-202ENST00000402876 USPL1Q5W0Q7 1092 aa24.19■■□□□ 1.46
PARVB-202ENST00000402876 SMIM5Q71RC9 77 aa24.19■■□□□ 1.46
PARVB-202ENST00000402876 AMIGO3Q86WK7 504 aa24.19■■□□□ 1.46
PARVB-202ENST00000402876 JARID2Q92833 1246 aaPredicted RBP24.19■■□□□ 1.46
PARVB-202ENST00000402876 KAZALD1Q96I82 304 aa24.19■■□□□ 1.46
PARVB-202ENST00000402876 CAMKK2Q96RR4 588 aa24.19■■□□□ 1.46
PARVB-202ENST00000402876 NIP7Q9Y221 180 aaKnown RBP eCLIP24.19■■□□□ 1.46
PARVB-202ENST00000402876 QSER1Q2KHR3 1735 aa24.18■■□□□ 1.46
PARVB-202ENST00000402876 SRP68Q9UHB9 627 aaKnown RBP24.18■■□□□ 1.46
PARVB-202ENST00000402876 TRMT112Q9UI30 125 aaKnown RBP24.18■■□□□ 1.46
PARVB-202ENST00000402876 CCDC125Q86Z20 511 aa24.17■■□□□ 1.46
PARVB-202ENST00000402876 AKT1S1Q96B36 256 aa24.17■■□□□ 1.46
PARVB-202ENST00000402876 EN1Q05925 392 aaPredicted RBP24.16■■□□□ 1.46
PARVB-202ENST00000402876 EZH2Q15910 746 aaKnown RBP24.16■■□□□ 1.46
PARVB-202ENST00000402876 RABL6Q3YEC7 729 aaPredicted RBP24.16■■□□□ 1.46
PARVB-202ENST00000402876 RTL5Q5HYW3 569 aaPredicted RBP24.16■■□□□ 1.46
PARVB-202ENST00000402876 UTP14AQ9BVJ6 771 aaKnown RBP24.16■■□□□ 1.46
PARVB-202ENST00000402876 BCL2L12Q9HB09 334 aa24.16■■□□□ 1.46
PARVB-202ENST00000402876 TFCP2L1Q9NZI6 479 aa24.16■■□□□ 1.46
PARVB-202ENST00000402876 PDZRN3Q9UPQ7 1066 aa24.16■■□□□ 1.46
PARVB-202ENST00000402876 ZNF827Q17R98 1081 aa24.15■■□□□ 1.46
PARVB-202ENST00000402876 EPHA10Q5JZY3 1008 aa24.15■■□□□ 1.46
PARVB-202ENST00000402876 FLAD1Q8NFF5 587 aa24.15■■□□□ 1.46
PARVB-202ENST00000402876 FAM89AQ96GI7 184 aa24.15■■□□□ 1.46
PARVB-202ENST00000402876 PLA2G12BQ9BX93 195 aa24.15■■□□□ 1.46
PARVB-202ENST00000402876 ZBTB47Q9UFB7 747 aaPredicted RBP24.15■■□□□ 1.46
PARVB-202ENST00000402876 DDX60Q8IY21 1712 aaKnown RBP24.15■■□□□ 1.46
PARVB-202ENST00000402876 HSP90B1P14625 803 aaKnown RBP24.14■■□□□ 1.45
PARVB-202ENST00000402876 FOXO4P98177 505 aa24.14■■□□□ 1.45
PARVB-202ENST00000402876 NUCB1Q02818 461 aa24.14■■□□□ 1.45
PARVB-202ENST00000402876 SUSD4Q5VX71 490 aa24.14■■□□□ 1.45
PARVB-202ENST00000402876 SH3TC1Q8TE82 1336 aa24.13■■□□□ 1.45
PARVB-202ENST00000402876 TBC1D9BQ66K14 1250 aa24.13■■□□□ 1.45
PARVB-202ENST00000402876 NTSR2O95665 410 aa24.12■■□□□ 1.45
PARVB-202ENST00000402876 HSP90AB4PQ58FF6 505 aa24.12■■□□□ 1.45
PARVB-202ENST00000402876 ANKRD45Q5TZF3 282 aa24.12■■□□□ 1.45
PARVB-202ENST00000402876 SETDB2Q96T68 719 aa24.12■■□□□ 1.45
PARVB-202ENST00000402876 CASZ1Q86V15 1759 aa24.11■■□□□ 1.45
PARVB-202ENST00000402876 IRS4O14654 1257 aaPredicted RBP24.11■■□□□ 1.45
PARVB-202ENST00000402876 LMBR1LQ6UX01 489 aa24.11■■□□□ 1.45
PARVB-202ENST00000402876 CHD1LQ86WJ1 897 aa24.11■■□□□ 1.45
PARVB-202ENST00000402876 NYXQ9GZU5 481 aa24.11■■□□□ 1.45
PARVB-202ENST00000402876 FAM177BA6PVY3 158 aa24.1■■□□□ 1.45
PARVB-202ENST00000402876 RAB11FIP3O75154 756 aa24.1■■□□□ 1.45
PARVB-202ENST00000402876 BICDL1Q6ZP65 573 aa24.1■■□□□ 1.45
PARVB-202ENST00000402876 EXOC6BQ9Y2D4 811 aa24.1■■□□□ 1.45
PARVB-202ENST00000402876 PDE8AO60658 829 aa24.09■■□□□ 1.45
PARVB-202ENST00000402876 SURF6O75683 361 aaKnown RBP24.09■■□□□ 1.45
PARVB-202ENST00000402876 STK32BQ9NY57 414 aa24.09■■□□□ 1.45
PARVB-202ENST00000402876 NOP58Q9Y2X3 529 aaKnown RBP24.09■■□□□ 1.45
PARVB-202ENST00000402876 CHMP3Q9Y3E7 222 aa24.09■■□□□ 1.45
PARVB-202ENST00000402876 CARMIL3Q8ND23 1372 aa24.08■■□□□ 1.45
PARVB-202ENST00000402876 GYS1P13807 737 aa24.08■■□□□ 1.45
PARVB-202ENST00000402876 SYNE4Q8N205 404 aa24.08■■□□□ 1.45
PARVB-202ENST00000402876 CTSWP56202 376 aa24.07■■□□□ 1.44
PARVB-202ENST00000402876 DEFB132Q7Z7B7 95 aa24.07■■□□□ 1.44
PARVB-202ENST00000402876 LNPKQ9C0E8 428 aa24.07■■□□□ 1.44
PARVB-202ENST00000402876 CSF1RP07333 972 aa24.06■■□□□ 1.44
PARVB-202ENST00000402876 RGS3P49796 1198 aa24.06■■□□□ 1.44
PARVB-202ENST00000402876 OS9Q13438 667 aaPredicted RBP24.06■■□□□ 1.44
PARVB-202ENST00000402876 SLC15A2Q16348 729 aa24.06■■□□□ 1.44
PARVB-202ENST00000402876 NBPF5PQ86XG9 351 aaPredicted RBP24.06■■□□□ 1.44
PARVB-202ENST00000402876 ERC1Q8IUD2 1116 aa24.06■■□□□ 1.44
PARVB-202ENST00000402876 LRRCC1Q9C099 1032 aa24.06■■□□□ 1.44
PARVB-202ENST00000402876 APBB1O00213 710 aa24.05■■□□□ 1.44
PARVB-202ENST00000402876 MSH5O43196 834 aa24.05■■□□□ 1.44
PARVB-202ENST00000402876 GTF2E1P29083 439 aaPredicted RBP24.05■■□□□ 1.44
PARVB-202ENST00000402876 SKAP1Q86WV1 359 aa24.05■■□□□ 1.44
PARVB-202ENST00000402876 COL23A1Q86Y22 540 aaPredicted RBP24.05■■□□□ 1.44
PARVB-202ENST00000402876 COPRSQ9NQ92 184 aa24.05■■□□□ 1.44
PARVB-202ENST00000402876 PNPLA7Q6ZV29 1317 aa24.05■■□□□ 1.44
PARVB-202ENST00000402876 RFX5P48382 616 aaPredicted RBP24.04■■□□□ 1.44
PARVB-202ENST00000402876 G3BP1Q13283 466 aaKnown RBP eCLIP24.04■■□□□ 1.44
PARVB-202ENST00000402876 NFIXQ14938 502 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms