RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 DZIP3Q86Y13 1208 aaKnown RBP31.59■■■□□ 2.65
CPNE1-205ENST00000401607 RTL5Q5HYW3 569 aaPredicted RBP31.58■■■□□ 2.65
CPNE1-205ENST00000401607 ERC1Q8IUD2 1116 aa31.58■■■□□ 2.65
CPNE1-205ENST00000401607 ERVV-1B6SEH8 477 aa31.58■■■□□ 2.65
CPNE1-205ENST00000401607 TSHZ3Q63HK5 1081 aa31.58■■■□□ 2.65
CPNE1-205ENST00000401607 TBC1D9Q6ZT07 1266 aa31.58■■■□□ 2.65
CPNE1-205ENST00000401607 TBC1D2BQ9UPU7 963 aa31.58■■■□□ 2.65
CPNE1-205ENST00000401607 NUP98P52948 1817 aa31.58■■■□□ 2.65
CPNE1-205ENST00000401607 CDC45O75419 566 aa31.57■■■□□ 2.64
CPNE1-205ENST00000401607 SDSP20132 328 aa31.57■■■□□ 2.64
CPNE1-205ENST00000401607 HSP90AB3PQ58FF7 597 aa31.57■■■□□ 2.64
CPNE1-205ENST00000401607 KLHDC4Q8TBB5 520 aa31.57■■■□□ 2.64
CPNE1-205ENST00000401607 SBF2Q86WG5 1849 aa31.57■■■□□ 2.64
CPNE1-205ENST00000401607 NUTM1Q86Y26 1132 aa31.56■■■□□ 2.64
CPNE1-205ENST00000401607 UPF2Q9HAU5 1272 aaKnown RBP31.56■■■□□ 2.64
CPNE1-205ENST00000401607 COPRSQ9NQ92 184 aa31.56■■■□□ 2.64
CPNE1-205ENST00000401607 LMBR1LQ6UX01 489 aa31.56■■■□□ 2.64
CPNE1-205ENST00000401607 AOX1Q06278 1338 aa31.55■■■□□ 2.64
CPNE1-205ENST00000401607 SASH1O94885 1247 aa31.55■■■□□ 2.64
CPNE1-205ENST00000401607 MFAP1P55081 439 aaKnown RBP31.55■■■□□ 2.64
CPNE1-205ENST00000401607 G3BP1Q13283 466 aaKnown RBP eCLIP31.55■■■□□ 2.642e-8■□□□□ 11.1
CPNE1-205ENST00000401607 LINC00116Q8NCU8 138 aa31.54■■■□□ 2.64
CPNE1-205ENST00000401607 TBC1D32Q96NH3 1257 aa31.54■■■□□ 2.64
CPNE1-205ENST00000401607 PCCAP05165 728 aaPredicted RBP31.53■■■□□ 2.64
CPNE1-205ENST00000401607 PTPN12Q05209 780 aaKnown RBP31.53■■■□□ 2.64
CPNE1-205ENST00000401607 NLRP10Q86W26 655 aa31.53■■■□□ 2.64
CPNE1-205ENST00000401607 SIL1Q9H173 461 aa31.53■■■□□ 2.64
CPNE1-205ENST00000401607 GPTP24298 496 aa31.52■■■□□ 2.64
CPNE1-205ENST00000401607 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.52■■■□□ 2.64
CPNE1-205ENST00000401607 CLASRPQ8N2M8 674 aaKnown RBP31.51■■■□□ 2.64
CPNE1-205ENST00000401607 ZBTB38Q8NAP3 1195 aaPredicted RBP31.51■■■□□ 2.64
CPNE1-205ENST00000401607 USP42Q9H9J4 1324 aaKnown RBP31.5■■■□□ 2.63
CPNE1-205ENST00000401607 KCNQ4P56696 695 aa31.5■■■□□ 2.63
CPNE1-205ENST00000401607 ZNF34Q8IZ26 560 aa31.49■■■□□ 2.63
CPNE1-205ENST00000401607 FAM89AQ96GI7 184 aa31.49■■■□□ 2.63
CPNE1-205ENST00000401607 CAMTA2O94983 1202 aa31.48■■■□□ 2.63
CPNE1-205ENST00000401607 PI4K2BQ8TCG2 481 aa31.48■■■□□ 2.63
CPNE1-205ENST00000401607 PLA2G12BQ9BX93 195 aa31.48■■■□□ 2.63
CPNE1-205ENST00000401607 LY75O60449 1722 aa31.48■■■□□ 2.63
CPNE1-205ENST00000401607 UBN2Q6ZU65 1347 aa31.48■■■□□ 2.63
CPNE1-205ENST00000401607 CDHR2Q9BYE9 1310 aa31.47■■■□□ 2.63
CPNE1-205ENST00000401607 CNTNAP4Q9C0A0 1308 aa31.47■■■□□ 2.63
CPNE1-205ENST00000401607 DDRGK1Q96HY6 314 aa31.47■■■□□ 2.63
CPNE1-205ENST00000401607 CHMP3Q9Y3E7 222 aa31.47■■■□□ 2.63
CPNE1-205ENST00000401607 C22orf23Q9BZE7 217 aa31.45■■■□□ 2.63
CPNE1-205ENST00000401607 BCORQ6W2J9 1755 aa31.45■■■□□ 2.63
CPNE1-205ENST00000401607 BRWD3Q6RI45 1802 aa31.45■■■□□ 2.63
CPNE1-205ENST00000401607 AACSQ86V21 672 aa31.44■■■□□ 2.62
CPNE1-205ENST00000401607 SYNE4Q8N205 404 aa31.44■■■□□ 2.62
CPNE1-205ENST00000401607 EAF2Q96CJ1 260 aaPredicted RBP31.44■■■□□ 2.62
CPNE1-205ENST00000401607 TTC41PQ6P2S7 1318 aa31.44■■■□□ 2.62
CPNE1-205ENST00000401607 IFIT2P09913 472 aaKnown RBP31.43■■■□□ 2.62
CPNE1-205ENST00000401607 CCNL1Q9UK58 526 aaPredicted RBP31.41■■■□□ 2.62
CPNE1-205ENST00000401607 CSF1RP07333 972 aa31.4■■■□□ 2.62
CPNE1-205ENST00000401607 RC3H1Q5TC82 1133 aaKnown RBP31.4■■■□□ 2.62
CPNE1-205ENST00000401607 TRMT112Q9UI30 125 aaKnown RBP31.4■■■□□ 2.62
CPNE1-205ENST00000401607 BCL11BQ9C0K0 894 aaPredicted RBP31.4■■■□□ 2.62
CPNE1-205ENST00000401607 TFCP2Q12800 502 aa31.39■■■□□ 2.62
CPNE1-205ENST00000401607 ECHDC1Q9NTX5 307 aa31.39■■■□□ 2.62
CPNE1-205ENST00000401607 TAF1LQ8IZX4 1826 aa31.39■■■□□ 2.62
CPNE1-205ENST00000401607 TRIM6-TRIM34B2RNG4 842 aa31.38■■■□□ 2.61
CPNE1-205ENST00000401607 CASC1Q6TDU7 716 aa31.38■■■□□ 2.61
CPNE1-205ENST00000401607 ATG9AQ7Z3C6 839 aa31.38■■■□□ 2.61
CPNE1-205ENST00000401607 KRT27Q7Z3Y8 459 aa31.38■■■□□ 2.61
CPNE1-205ENST00000401607 RILPL2Q969X0 211 aa31.38■■■□□ 2.61
CPNE1-205ENST00000401607 CCDC8Q9H0W5 538 aaPredicted RBP31.38■■■□□ 2.61
CPNE1-205ENST00000401607 TLR7Q9NYK1 1049 aaKnown RBP31.38■■■□□ 2.61
CPNE1-205ENST00000401607 IRS4O14654 1257 aaPredicted RBP31.37■■■□□ 2.61
CPNE1-205ENST00000401607 GLRX3O76003 335 aaKnown RBP31.37■■■□□ 2.61
CPNE1-205ENST00000401607 RBM25P49756 843 aaKnown RBP31.37■■■□□ 2.61
CPNE1-205ENST00000401607 SUSD4Q5VX71 490 aa31.37■■■□□ 2.61
CPNE1-205ENST00000401607 ZNF594Q96JF6 807 aaPredicted RBP31.37■■■□□ 2.61
CPNE1-205ENST00000401607 GPATCH3Q96I76 525 aa31.36■■■□□ 2.61
CPNE1-205ENST00000401607 SCN7AQ01118 1682 aa31.36■■■□□ 2.61
CPNE1-205ENST00000401607 ERC2O15083 957 aa31.35■■■□□ 2.61
CPNE1-205ENST00000401607 EIF5BO60841 1220 aaKnown RBP31.35■■■□□ 2.61
CPNE1-205ENST00000401607 TNNI3KQ59H18 835 aa31.35■■■□□ 2.61
CPNE1-205ENST00000401607 ZNF772Q68DY9 489 aaPredicted RBP31.35■■■□□ 2.61
CPNE1-205ENST00000401607 FPGT-TNNI3KV9GXZ4 949 aa31.35■■■□□ 2.61
CPNE1-205ENST00000401607 MYH3P11055 1940 aa31.35■■■□□ 2.61
CPNE1-205ENST00000401607 CCDC57Q2TAC2 916 aa31.35■■■□□ 2.61
CPNE1-205ENST00000401607 FAM196AQ6ZSG2 479 aa31.35■■■□□ 2.61
CPNE1-205ENST00000401607 EYA2O00167 538 aa31.34■■■□□ 2.61
CPNE1-205ENST00000401607 RPS6KA4O75676 772 aa31.34■■■□□ 2.61
CPNE1-205ENST00000401607 CTSWP56202 376 aa31.34■■■□□ 2.61
CPNE1-205ENST00000401607 PARP10Q53GL7 1025 aa31.34■■■□□ 2.61
CPNE1-205ENST00000401607 TTLL11Q8NHH1 800 aa31.34■■■□□ 2.61
CPNE1-205ENST00000401607 CIAO1O76071 339 aa31.33■■■□□ 2.61
CPNE1-205ENST00000401607 MAP4K4O95819 1239 aaPredicted RBP31.33■■■□□ 2.61
CPNE1-205ENST00000401607 IL15P40933 162 aaPredicted RBP31.33■■■□□ 2.61
CPNE1-205ENST00000401607 LRRC24Q50LG9 513 aa31.33■■■□□ 2.61
CPNE1-205ENST00000401607 CCDC85AQ96PX6 553 aaPredicted RBP31.33■■■□□ 2.61
CPNE1-205ENST00000401607 ZNF652Q9Y2D9 606 aa31.33■■■□□ 2.61
CPNE1-205ENST00000401607 AK9Q5TCS8 1911 aa31.33■■■□□ 2.61
CPNE1-205ENST00000401607 RBM6P78332 1123 aaKnown RBP31.33■■■□□ 2.61
CPNE1-205ENST00000401607 CLEC4GQ6UXB4 293 aa31.33■■■□□ 2.61
CPNE1-205ENST00000401607 SMIM5Q71RC9 77 aa31.33■■■□□ 2.61
CPNE1-205ENST00000401607 NIP7Q9Y221 180 aaKnown RBP eCLIP31.33■■■□□ 2.61
CPNE1-205ENST00000401607 PDE8AO60658 829 aa31.32■■■□□ 2.6
CPNE1-205ENST00000401607 CHMLP26374 656 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms