RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 NHSL1Q5SYE7 1610 aa13□□□□□ -0.33
LINC00649-202ENST00000400353 MAP4K4O95819 1239 aaPredicted RBP13□□□□□ -0.33
LINC00649-202ENST00000400353 COPRSQ9NQ92 184 aa13□□□□□ -0.33
LINC00649-202ENST00000400353 PALD1Q9ULE6 856 aa13□□□□□ -0.33
LINC00649-202ENST00000400353 SASH1O94885 1247 aa12.99□□□□□ -0.33
LINC00649-202ENST00000400353 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
LINC00649-202ENST00000400353 AFDNP55196 1824 aaKnown RBP12.99□□□□□ -0.33
LINC00649-202ENST00000400353 MRE11P49959 708 aa12.98□□□□□ -0.33
LINC00649-202ENST00000400353 KCPQ6ZWJ8 1503 aa12.98□□□□□ -0.33
LINC00649-202ENST00000400353 TNS2Q63HR2 1409 aa12.97□□□□□ -0.33
LINC00649-202ENST00000400353 KLHL40Q2TBA0 621 aa12.97□□□□□ -0.33
LINC00649-202ENST00000400353 RFX7Q2KHR2 1363 aa12.97□□□□□ -0.33
LINC00649-202ENST00000400353 CWC27Q6UX04 472 aaKnown RBP12.97□□□□□ -0.33
LINC00649-202ENST00000400353 ZGPATQ8N5A5 531 aaKnown RBP12.97□□□□□ -0.33
LINC00649-202ENST00000400353 KCNB2Q92953 911 aa12.97□□□□□ -0.33
LINC00649-202ENST00000400353 EAF2Q96CJ1 260 aaPredicted RBP12.97□□□□□ -0.33
LINC00649-202ENST00000400353 GZF1Q9H116 711 aaPredicted RBP12.97□□□□□ -0.33
LINC00649-202ENST00000400353 SNRKQ9NRH2 765 aa12.97□□□□□ -0.33
LINC00649-202ENST00000400353 BCCIPQ9P287 314 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC00649-202ENST00000400353 SNX14Q9Y5W7 946 aa12.97□□□□□ -0.33
LINC00649-202ENST00000400353 RFX5P48382 616 aaPredicted RBP12.96□□□□□ -0.33
LINC00649-202ENST00000400353 EVA1CP58658 441 aa12.96□□□□□ -0.33
LINC00649-202ENST00000400353 TM6SF1Q9BZW5 370 aa12.96□□□□□ -0.33
LINC00649-202ENST00000400353 IL25Q9H293 177 aa12.96□□□□□ -0.33
LINC00649-202ENST00000400353 SHANK3Q9BYB0 1731 aa12.96□□□□□ -0.34
LINC00649-202ENST00000400353 A0A087WZG4 1122 aa12.95□□□□□ -0.34
LINC00649-202ENST00000400353 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
LINC00649-202ENST00000400353 NUP188Q5SRE5 1749 aa12.95□□□□□ -0.34
LINC00649-202ENST00000400353 H7C1W4 665 aa12.95□□□□□ -0.34
LINC00649-202ENST00000400353 CASP7P55210 303 aa12.95□□□□□ -0.34
LINC00649-202ENST00000400353 EPHA10Q5JZY3 1008 aa12.95□□□□□ -0.34
LINC00649-202ENST00000400353 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
LINC00649-202ENST00000400353 NAP1L2Q9ULW6 460 aaPredicted RBP12.95□□□□□ -0.34
LINC00649-202ENST00000400353 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
LINC00649-202ENST00000400353 UBE3BQ7Z3V4 1068 aa12.94□□□□□ -0.34
LINC00649-202ENST00000400353 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
LINC00649-202ENST00000400353 CCDC8Q9H0W5 538 aaPredicted RBP12.94□□□□□ -0.34
LINC00649-202ENST00000400353 CWC25Q9NXE8 425 aaPredicted RBP12.94□□□□□ -0.34
LINC00649-202ENST00000400353 AHDC1Q5TGY3 1603 aaPredicted RBP12.94□□□□□ -0.34
LINC00649-202ENST00000400353 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 BRD1O95696 1058 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 ATP5JP18859 108 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 NBPF14Q5TI25 921 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
LINC00649-202ENST00000400353 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 TTC14Q96N46 770 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 SIL1Q9H173 461 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 DDX49Q9Y6V7 483 aaKnown RBP12.93□□□□□ -0.34
LINC00649-202ENST00000400353 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 ZKSCAN1P17029 563 aaPredicted RBP12.93□□□□□ -0.34
LINC00649-202ENST00000400353 TNNI3KQ59H18 835 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 ZSCAN31Q96LW9 406 aaPredicted RBP12.93□□□□□ -0.34
LINC00649-202ENST00000400353 UPF3BQ9BZI7 483 aaKnown RBP12.93□□□□□ -0.34
LINC00649-202ENST00000400353 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 FPGT-TNNI3KV9GXZ4 949 aa12.93□□□□□ -0.34
LINC00649-202ENST00000400353 FSD1Q9BTV5 496 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 GPR108Q9NPR9 543 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 LMBRD1Q9NUN5 540 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 ATP5J2-PTCD1G3V325 749 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
LINC00649-202ENST00000400353 XRCC6P12956 609 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC00649-202ENST00000400353 PSMA5P28066 241 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 PIP4K2AP48426 406 aaPredicted RBP12.92□□□□□ -0.34
LINC00649-202ENST00000400353 VPS53Q5VIR6 699 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 RNF20Q5VTR2 975 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
LINC00649-202ENST00000400353 GRPEL1Q9HAV7 217 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 STRN4Q9NRL3 753 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 TMOD3Q9NYL9 352 aa12.92□□□□□ -0.34
LINC00649-202ENST00000400353 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.92□□□□□ -0.34
LINC00649-202ENST00000400353 WDR33Q9C0J8 1336 aaKnown RBP12.91□□□□□ -0.34
LINC00649-202ENST00000400353 COL14A1Q05707 1796 aaKnown RBP12.91□□□□□ -0.34
LINC00649-202ENST00000400353 NMIQ13287 307 aaPredicted RBP12.91□□□□□ -0.34
LINC00649-202ENST00000400353 NECTIN1Q15223 517 aa12.91□□□□□ -0.34
LINC00649-202ENST00000400353 SH2B1Q9NRF2 756 aaPredicted RBP12.91□□□□□ -0.34
LINC00649-202ENST00000400353 TLR7Q9NYK1 1049 aaKnown RBP12.91□□□□□ -0.34
LINC00649-202ENST00000400353 CYP46A1Q9Y6A2 500 aa12.91□□□□□ -0.34
LINC00649-202ENST00000400353 JCADQ9P266 1359 aa12.91□□□□□ -0.34
LINC00649-202ENST00000400353 FOXO4P98177 505 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 TFCP2Q12800 502 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 PKP1Q13835 747 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 RASEFQ8IZ41 740 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 MAP4K1Q92918 833 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 HMG20BQ9P0W2 317 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 PHLPP1O60346 1717 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 TJP1Q07157 1748 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 MED23Q9ULK4 1368 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 TOGARAM1Q9Y4F4 1720 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 MBD3O95983 291 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 A1BGP04217 495 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 AK2P54819 239 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 PTH1RQ03431 593 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 PRPF40BQ6NWY9 871 aaKnown RBP12.9□□□□□ -0.34
LINC00649-202ENST00000400353 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms