RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 PHACTR3Q96KR7 559 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 DACH1Q9UI36 760 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 TTC37Q6PGP7 1564 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 UHRF1BP1LA0JNW5 1464 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 BAG4O95429 457 aaKnown RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 SLC5A1P13866 664 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 TMEM67Q5HYA8 995 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 TTC22Q5TAA0 569 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 CCDC181Q5TID7 509 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 COPS6Q7L5N1 327 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 MTERF4Q7Z6M4 381 aaKnown RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 DHX37Q8IY37 1157 aaKnown RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 TSPYL6Q8N831 410 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 PANK2Q9BZ23 570 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 CEP131Q9UPN4 1083 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 IQSEC3Q9UPP2 1182 aaPredicted RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 PIK3R4Q99570 1358 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 ANKRD18BA2A2Z9 1011 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 EIF4A2Q14240 407 aaKnown RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 WWC2Q6AWC2 1192 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 CNNM3Q8NE01 707 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 POLKQ9UBT6 870 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 E9PCH4 1651 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 SAMD9LQ8IVG5 1584 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 MAGI3Q5TCQ9 1506 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 CCDC196A0A1B0GTZ2 297 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 EIF5P55010 431 aaKnown RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 CHMP4BP1P59074 171 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 SSRP1Q08945 709 aaKnown RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 C16orf45Q96MC5 204 aaPredicted RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 MAP7D2Q96T17 732 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 PA2G4Q9UQ80 394 aaKnown RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 PLEKHH1Q9ULM0 1364 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 EPB41L2O43491 1005 aaKnown RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 HMGB1P09429 215 aaKnown RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 HSP90AA4PQ58FG1 418 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 CATIPQ7Z7H3 387 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 CRACR2BQ8N4Y2 399 aaPredicted RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 CCDC112Q8NEF3 446 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 TESK2Q96S53 571 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 SH2B1Q9NRF2 756 aaPredicted RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 USP25Q9UHP3 1055 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 RIMS2Q9UQ26 1411 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 A0A1W2PP64 1363 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 SMTNL1A8MU46 457 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 C6orf229H3BNL8 230 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 CCP110O43303 1012 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 ENOX2Q16206 610 aaKnown RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 HSP90AB3PQ58FF7 597 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 FSIP1Q8NA03 581 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 XAGE3Q8WTP9 111 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 SCN2AQ99250 2005 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 ZNF287Q9HBT7 754 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 ECHDC1Q9NTX5 307 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 MYO6Q9UM54 1294 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 TET3O43151 1660 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 ARHGEF12Q9NZN5 1544 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 PARD3Q8TEW0 1356 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 TNRQ92752 1358 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 SNRPA1P09661 255 aaKnown RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 ZNF397Q8NF99 534 aaPredicted RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 NEK1Q96PY6 1258 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 PDCL3Q9H2J4 239 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 LUC7LQ9NQ29 371 aaKnown RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 BMP2KQ9NSY1 1161 aaPredicted RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 STX8Q9UNK0 236 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 SHROOM3Q8TF72 1996 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 H0YHG0 523 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 ADCY5O95622 1261 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 RFC4P35249 363 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 UBE2HP62256 183 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 PTPN14Q15678 1187 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 CADPS2Q86UW7 1296 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 IFNL2Q8IZJ0 200 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 WASF1Q92558 559 aa3.78□□□□□ -1.8
KNL1-202ENST00000399668 BICC1Q9H694 974 aaKnown RBP3.78□□□□□ -1.8
KNL1-202ENST00000399668 NLRP5P59047 1200 aa3.78□□□□□ -1.81
KNL1-202ENST00000399668 HDAC1Q13547 482 aaPredicted RBP3.78□□□□□ -1.81
KNL1-202ENST00000399668 CCDC96Q2M329 555 aa3.78□□□□□ -1.81
KNL1-202ENST00000399668 SCAND2PQ9GZW5 306 aaPredicted RBP3.78□□□□□ -1.81
KNL1-202ENST00000399668 TSPY2A6NKD2 308 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 HCLS1P14317 486 aaPredicted RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 TAF3Q5VWG9 929 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 ZCRB1Q8TBF4 217 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 ZBTB9Q96C00 473 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 TMX3Q96JJ7 454 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 UBA5Q9GZZ9 404 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 USP16Q9Y5T5 823 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 MSH6P52701 1360 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 TCOF1Q13428 1488 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.77□□□□□ -1.81
KNL1-202ENST00000399668 GOLGA6L10A6NI86 522 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 CBFA2T2O43439 604 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 PRKCSHP14314 528 aaPredicted RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 DNA2P51530 1060 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 PDE1AP54750 535 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 CWF19L2Q2TBE0 894 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 MFSD6Q6ZSS7 791 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 ZNF830Q96NB3 372 aaPredicted RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 SLC26A6Q9BXS9 759 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms