RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 NBPF15Q8N660 670 aa24.27■■□□□ 1.48
UFD1-202ENST00000399523 FAM177BA6PVY3 158 aa24.26■■□□□ 1.47
UFD1-202ENST00000399523 TRAF5O00463 557 aa24.26■■□□□ 1.47
UFD1-202ENST00000399523 GRM1Q13255 1194 aa24.26■■□□□ 1.47
UFD1-202ENST00000399523 GRIPAP1Q4V328 841 aa24.25■■□□□ 1.47
UFD1-202ENST00000399523 TSKSQ9UJT2 592 aa24.25■■□□□ 1.47
UFD1-202ENST00000399523 CASP8AP2Q9UKL3 1982 aa24.24■■□□□ 1.47
UFD1-202ENST00000399523 CA12O43570 354 aa24.24■■□□□ 1.47
UFD1-202ENST00000399523 AOC2O75106 756 aa24.24■■□□□ 1.47
UFD1-202ENST00000399523 GTF2E1P29083 439 aaPredicted RBP24.24■■□□□ 1.47
UFD1-202ENST00000399523 HLFQ16534 295 aa24.24■■□□□ 1.47
UFD1-202ENST00000399523 CC2D1BQ5T0F9 858 aaKnown RBP24.24■■□□□ 1.47
UFD1-202ENST00000399523 PHACTR3Q96KR7 559 aa24.24■■□□□ 1.47
UFD1-202ENST00000399523 MCOLN1Q9GZU1 580 aa24.23■■□□□ 1.47
UFD1-202ENST00000399523 TNRC18O15417 2968 aaPredicted RBP24.23■■□□□ 1.47
UFD1-202ENST00000399523 HOXA10P31260 410 aaPredicted RBP24.22■■□□□ 1.47
UFD1-202ENST00000399523 SAPCD2Q86UD0 394 aa24.22■■□□□ 1.47
UFD1-202ENST00000399523 LARGE2Q8N3Y3 721 aa24.22■■□□□ 1.47
UFD1-202ENST00000399523 ABCC12Q96J65 1359 aa24.21■■□□□ 1.47
UFD1-202ENST00000399523 HHIPL1Q96JK4 782 aa24.21■■□□□ 1.47
UFD1-202ENST00000399523 NYXQ9GZU5 481 aa24.21■■□□□ 1.47
UFD1-202ENST00000399523 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.46
UFD1-202ENST00000399523 KIF7Q2M1P5 1343 aa24.19■■□□□ 1.46
UFD1-202ENST00000399523 PRKAR2BP31323 418 aa24.18■■□□□ 1.46
UFD1-202ENST00000399523 BRPF1P55201 1214 aaPredicted RBP24.18■■□□□ 1.46
UFD1-202ENST00000399523 NUTM1Q86Y26 1132 aa24.18■■□□□ 1.46
UFD1-202ENST00000399523 RSPH6AQ9H0K4 717 aa24.18■■□□□ 1.46
UFD1-202ENST00000399523 ADARB2Q9NS39 739 aaKnown RBP24.18■■□□□ 1.46
UFD1-202ENST00000399523 GPRC5DQ9NZD1 345 aa24.18■■□□□ 1.46
UFD1-202ENST00000399523 RIC1Q4ADV7 1423 aa24.18■■□□□ 1.46
UFD1-202ENST00000399523 NIM1KQ8IY84 436 aa24.17■■□□□ 1.46
UFD1-202ENST00000399523 RPGRQ92834 1020 aaKnown RBP24.17■■□□□ 1.46
UFD1-202ENST00000399523 CRAMP1Q96RY5 1269 aa24.17■■□□□ 1.46
UFD1-202ENST00000399523 NPC1L1Q9UHC9 1359 aa24.16■■□□□ 1.46
UFD1-202ENST00000399523 ERVV-1B6SEH8 477 aa24.16■■□□□ 1.46
UFD1-202ENST00000399523 CELF2O95319 508 aaKnown RBP24.16■■□□□ 1.46
UFD1-202ENST00000399523 CFAP44Q96MT7 982 aa24.16■■□□□ 1.46
UFD1-202ENST00000399523 PGAP2Q9UHJ9 254 aa24.16■■□□□ 1.46
UFD1-202ENST00000399523 NUP98P52948 1817 aa24.16■■□□□ 1.46
UFD1-202ENST00000399523 MCM10Q7L590 875 aa24.15■■□□□ 1.46
UFD1-202ENST00000399523 VPS33BQ9H267 617 aa24.15■■□□□ 1.46
UFD1-202ENST00000399523 RTF1Q92541 710 aaKnown RBP24.14■■□□□ 1.45
UFD1-202ENST00000399523 IBTKQ9P2D0 1353 aaPredicted RBP24.14■■□□□ 1.45
UFD1-202ENST00000399523 PPEF1O14829 653 aaPredicted RBP24.13■■□□□ 1.45
UFD1-202ENST00000399523 DGKZQ13574 1117 aa24.13■■□□□ 1.45
UFD1-202ENST00000399523 SLC51AQ86UW1 340 aa24.13■■□□□ 1.45
UFD1-202ENST00000399523 RBM17Q96I25 401 aaKnown RBP24.13■■□□□ 1.45
UFD1-202ENST00000399523 PPIP5K2O43314 1243 aa24.12■■□□□ 1.45
UFD1-202ENST00000399523 GLIS2Q9BZE0 524 aaPredicted RBP24.12■■□□□ 1.45
UFD1-202ENST00000399523 MAP3K15Q6ZN16 1313 aa24.11■■□□□ 1.45
UFD1-202ENST00000399523 CXCL9Q07325 125 aa24.11■■□□□ 1.45
UFD1-202ENST00000399523 CIAPIN1Q6FI81 312 aa24.11■■□□□ 1.45
UFD1-202ENST00000399523 ZC3H15Q8WU90 426 aaKnown RBP24.11■■□□□ 1.45
UFD1-202ENST00000399523 HTATSF1O43719 755 aaKnown RBP24.1■■□□□ 1.45
UFD1-202ENST00000399523 AOC3Q16853 763 aa24.1■■□□□ 1.45
UFD1-202ENST00000399523 ZNRF3Q9ULT6 936 aa24.1■■□□□ 1.45
UFD1-202ENST00000399523 UBN2Q6ZU65 1347 aa24.1■■□□□ 1.45
UFD1-202ENST00000399523 LAMB4A4D0S4 1761 aa24.09■■□□□ 1.45
UFD1-202ENST00000399523 TCERG1O14776 1098 aaKnown RBP24.09■■□□□ 1.45
UFD1-202ENST00000399523 GMPSP49915 693 aaPredicted RBP24.09■■□□□ 1.45
UFD1-202ENST00000399523 SUSD4Q5VX71 490 aa24.09■■□□□ 1.45
UFD1-202ENST00000399523 NOGQ13253 232 aa24.08■■□□□ 1.45
UFD1-202ENST00000399523 DCTN1Q14203 1278 aa24.08■■□□□ 1.45
UFD1-202ENST00000399523 TAF7Q15545 349 aaPredicted RBP24.08■■□□□ 1.45
UFD1-202ENST00000399523 NGEFQ8N5V2 710 aa24.08■■□□□ 1.45
UFD1-202ENST00000399523 RTFDC1Q9BY42 306 aaPredicted RBP24.08■■□□□ 1.45
UFD1-202ENST00000399523 ATP6V0A2Q9Y487 856 aa24.08■■□□□ 1.45
UFD1-202ENST00000399523 CDHR2Q9BYE9 1310 aa24.08■■□□□ 1.44
UFD1-202ENST00000399523 HIRAP54198 1017 aaPredicted RBP24.07■■□□□ 1.44
UFD1-202ENST00000399523 TTLL7Q6ZT98 887 aa24.07■■□□□ 1.44
UFD1-202ENST00000399523 C3orf67Q6ZVT6 689 aa24.07■■□□□ 1.44
UFD1-202ENST00000399523 CDC37L1Q7L3B6 337 aa24.07■■□□□ 1.44
UFD1-202ENST00000399523 NTSR2O95665 410 aa24.06■■□□□ 1.44
UFD1-202ENST00000399523 GPTP24298 496 aa24.06■■□□□ 1.44
UFD1-202ENST00000399523 KIF6Q6ZMV9 814 aa24.06■■□□□ 1.44
UFD1-202ENST00000399523 ZNF34Q8IZ26 560 aa24.06■■□□□ 1.44
UFD1-202ENST00000399523 ZIC5Q96T25 663 aa24.06■■□□□ 1.44
UFD1-202ENST00000399523 PCGF6Q9BYE7 350 aa24.06■■□□□ 1.44
UFD1-202ENST00000399523 SUPT20HQ8NEM7 779 aa24.05■■□□□ 1.44
UFD1-202ENST00000399523 CFAP53Q96M91 514 aa24.05■■□□□ 1.44
UFD1-202ENST00000399523 TMX4Q9H1E5 349 aaPredicted RBP24.05■■□□□ 1.44
UFD1-202ENST00000399523 ZNF408Q9H9D4 720 aa24.05■■□□□ 1.44
UFD1-202ENST00000399523 NUDCQ9Y266 331 aa24.05■■□□□ 1.44
UFD1-202ENST00000399523 MIS18AQ9NYP9 233 aa24.04■■□□□ 1.44
UFD1-202ENST00000399523 CNGB1Q14028 1251 aaPredicted RBP24.03■■□□□ 1.44
UFD1-202ENST00000399523 NLRP3Q96P20 1036 aa24.03■■□□□ 1.44
UFD1-202ENST00000399523 U2AF1L5P0DN76 240 aaPredicted RBP24.02■■□□□ 1.44
UFD1-202ENST00000399523 U2AF1Q01081 240 aaKnown RBP eCLIP24.02■■□□□ 1.447e-9■■■□□ 15.8
UFD1-202ENST00000399523 TNIP1Q15025 636 aa24.02■■□□□ 1.44
UFD1-202ENST00000399523 TRPM4Q8TD43 1214 aa24.02■■□□□ 1.44
UFD1-202ENST00000399523 ZBTB3Q9H5J0 574 aa24.02■■□□□ 1.44
UFD1-202ENST00000399523 RRP7AQ9Y3A4 280 aaKnown RBP24.02■■□□□ 1.44
UFD1-202ENST00000399523 HUNKP57058 714 aa24.01■■□□□ 1.43
UFD1-202ENST00000399523 KIAA2012Q0VF49 1180 aa24.01■■□□□ 1.43
UFD1-202ENST00000399523 SLC10A5Q5PT55 438 aa24.01■■□□□ 1.43
UFD1-202ENST00000399523 GIGYF2Q6Y7W6 1299 aaKnown RBP24.01■■□□□ 1.43
UFD1-202ENST00000399523 PPP1R42Q7Z4L9 355 aa24.01■■□□□ 1.43
UFD1-202ENST00000399523 BCL2L13Q9BXK5 485 aa24.01■■□□□ 1.43
UFD1-202ENST00000399523 SAGE1Q9NXZ1 904 aa24■■□□□ 1.43
UFD1-202ENST00000399523 CNOT7Q9UIV1 285 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms