RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 CAVIN4Q5BKX8 364 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 CTAGE1Q96RT6 745 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 ZKSCAN5Q9Y2L8 839 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 IFIT3O14879 490 aaKnown RBP12.92□□□□□ -0.34
LAMA3-203ENST00000399516 POLR3DP05423 398 aaPredicted RBP12.92□□□□□ -0.34
LAMA3-203ENST00000399516 IQCA1Q86XH1 822 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 MBIPQ9NS73 344 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 GOLIM4O00461 696 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 METAP2P50579 478 aaKnown RBP eCLIP12.92□□□□□ -0.34
LAMA3-203ENST00000399516 MSL1Q68DK7 614 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.92□□□□□ -0.34
LAMA3-203ENST00000399516 STARD3NLO95772 234 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 RSPH14Q9UHP6 348 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 CTAGE15A4D2H0 777 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 CTAGE8P0CG41 777 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 CTAGE6Q86UF2 777 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 CTAGE4Q8IX94 777 aa12.92□□□□□ -0.34
LAMA3-203ENST00000399516 CCDC96Q2M329 555 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 AMPD3Q01432 767 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 MICU3Q86XE3 530 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 SRRTQ9BXP5 876 aaKnown RBP12.91□□□□□ -0.34
LAMA3-203ENST00000399516 PRPF4BQ13523 1007 aaKnown RBP12.91□□□□□ -0.34
LAMA3-203ENST00000399516 PPP4R3AQ6IN85 833 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 EMILIN1Q9Y6C2 1016 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 TMCO5BA8MYB1 307 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 GTPBP4Q9BZE4 634 aaKnown RBP12.91□□□□□ -0.34
LAMA3-203ENST00000399516 RMND1Q9NWS8 449 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 SYKP43405 635 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 GTF2A1P52655 376 aaPredicted RBP12.91□□□□□ -0.34
LAMA3-203ENST00000399516 NLRP5P59047 1200 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 CALML4Q96GE6 196 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 NSRP1Q9H0G5 558 aaKnown RBP12.91□□□□□ -0.34
LAMA3-203ENST00000399516 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 UBASH3AP57075 661 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 TTF1Q15361 905 aaPredicted RBP12.91□□□□□ -0.34
LAMA3-203ENST00000399516 DZIP1Q86YF9 867 aaKnown RBP12.91□□□□□ -0.34
LAMA3-203ENST00000399516 MKNK2Q9HBH9 465 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 PRDM11Q9NQV5 511 aa12.91□□□□□ -0.34
LAMA3-203ENST00000399516 TTC21BQ7Z4L5 1316 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 TUBB4AP04350 444 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 CCDC144CPQ8IYA2 1237 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 DNAI2Q9GZS0 605 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 ANKRD36BQ8N2N9 1353 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 C8orf34Q49A92 452 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 THEMISQ8N1K5 641 aaPredicted RBP12.9□□□□□ -0.34
LAMA3-203ENST00000399516 N4BP3O15049 544 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 KIF5BP33176 963 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 CUL5Q93034 780 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 CTAGE9A4FU28 777 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 SYT1P21579 422 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 TMEM67Q5HYA8 995 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 SNX21Q969T3 373 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 TRIM47Q96LD4 638 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 EXOC1Q9NV70 894 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 CTNNA2P26232 953 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 IARSP41252 1262 aaKnown RBP12.9□□□□□ -0.34
LAMA3-203ENST00000399516 AMOTQ4VCS5 1084 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 BICDL1Q6ZP65 573 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 MAPKBP1O60336 1514 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 CETN1Q12798 172 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 ORC3Q9UBD5 711 aaPredicted RBP12.9□□□□□ -0.34
LAMA3-203ENST00000399516 RTL1A6NKG5 1358 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 C6orf163Q5TEZ5 329 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 KCNH5Q8NCM2 988 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 GOLGA1Q92805 767 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 DNAI1Q9UI46 699 aa12.9□□□□□ -0.34
LAMA3-203ENST00000399516 NME9Q86XW9 330 aa12.9□□□□□ -0.35
LAMA3-203ENST00000399516 KCNG4Q8TDN1 519 aa12.9□□□□□ -0.35
LAMA3-203ENST00000399516 MRPS27Q92552 414 aaKnown RBP12.9□□□□□ -0.35
LAMA3-203ENST00000399516 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.35
LAMA3-203ENST00000399516 FSD2A1L4K1 749 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 ISM2Q6H9L7 571 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 DBF4Q9UBU7 674 aaPredicted RBP12.89□□□□□ -0.35
LAMA3-203ENST00000399516 IFI16Q16666 785 aaKnown RBP12.89□□□□□ -0.35
LAMA3-203ENST00000399516 NCOA7Q8NI08 942 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 F13A1P00488 732 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 SDSP20132 328 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 SPTY2D1Q68D10 685 aaPredicted RBP12.89□□□□□ -0.35
LAMA3-203ENST00000399516 MYO1BO43795 1136 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 CCDC186Q7Z3E2 898 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 SPATA24Q86W54 205 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 AOPEPQ8N6M6 819 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 ANKS4BQ8N8V4 417 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 RASAL2Q9UJF2 1139 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 CCDC61Q9Y6R9 512 aa12.89□□□□□ -0.35
LAMA3-203ENST00000399516 SLU7O95391 586 aaKnown RBP12.88□□□□□ -0.35
LAMA3-203ENST00000399516 USHBP1Q8N6Y0 703 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 NOP2P46087 812 aaKnown RBP12.88□□□□□ -0.35
LAMA3-203ENST00000399516 RRAGBQ5VZM2 374 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 SLC26A6Q9BXS9 759 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 ANKIB1Q9P2G1 1089 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 ATP2C2O75185 946 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 PPP1R42Q7Z4L9 355 aa12.88□□□□□ -0.35
LAMA3-203ENST00000399516 CRACR2BQ8N4Y2 399 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms