RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 TRMT1LQ7Z2T5 733 aaKnown RBP24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 ANKRD36BQ8N2N9 1353 aa24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 TOM1O60784 492 aa24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 GOLIM4O00461 696 aa24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 PAFAH1B1P43034 410 aa24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 HDAC1Q13547 482 aaPredicted RBP24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 ANKRD24Q8TF21 1146 aa24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 NEK1Q96PY6 1258 aa24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 CLEC11AQ9Y240 323 aa24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 PLB1Q6P1J6 1458 aa24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 MAP2K1Q02750 393 aaPredicted RBP24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 TMX1Q9H3N1 280 aa24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 USP16Q9Y5T5 823 aa24.68■■□□□ 1.54
ANKRD28-201ENST00000399451 LDHAL6AQ6ZMR3 332 aa24.67■■□□□ 1.54
ANKRD28-201ENST00000399451 PRDM10Q9NQV6 1147 aa24.67■■□□□ 1.54
ANKRD28-201ENST00000399451 SPTY2D1Q68D10 685 aaPredicted RBP24.67■■□□□ 1.54
ANKRD28-201ENST00000399451 VAT1LQ9HCJ6 419 aa24.67■■□□□ 1.54
ANKRD28-201ENST00000399451 BIN1O00499 593 aa24.67■■□□□ 1.54
ANKRD28-201ENST00000399451 CCDC91Q7Z6B0 441 aa24.67■■□□□ 1.54
ANKRD28-201ENST00000399451 ACSBG1Q96GR2 724 aa24.66■■□□□ 1.54
ANKRD28-201ENST00000399451 MPHOSPH6Q99547 160 aaKnown RBP24.66■■□□□ 1.54
ANKRD28-201ENST00000399451 GOLGA6L9A6NEM1 432 aa24.66■■□□□ 1.54
ANKRD28-201ENST00000399451 CCDC113Q9H0I3 377 aa24.66■■□□□ 1.54
ANKRD28-201ENST00000399451 RALGAPBQ86X10 1494 aa24.66■■□□□ 1.54
ANKRD28-201ENST00000399451 ATP5J2-PTCD1G3V325 749 aa24.66■■□□□ 1.54
ANKRD28-201ENST00000399451 IARSP41252 1262 aaKnown RBP24.66■■□□□ 1.54
ANKRD28-201ENST00000399451 TDRD12Q587J7 1177 aaKnown RBP24.65■■□□□ 1.54
ANKRD28-201ENST00000399451 CAVIN2O95810 425 aa24.65■■□□□ 1.54
ANKRD28-201ENST00000399451 IFFO1Q0D2I5 559 aa24.65■■□□□ 1.54
ANKRD28-201ENST00000399451 SNW1Q13573 536 aaKnown RBP24.65■■□□□ 1.54
ANKRD28-201ENST00000399451 PRKCSHP14314 528 aaPredicted RBP24.65■■□□□ 1.54
ANKRD28-201ENST00000399451 TMEM67Q5HYA8 995 aa24.65■■□□□ 1.54
ANKRD28-201ENST00000399451 ALS2CR12Q96Q35 445 aa24.65■■□□□ 1.54
ANKRD28-201ENST00000399451 ZNF165P49910 485 aa24.65■■□□□ 1.54
ANKRD28-201ENST00000399451 PYM1Q9BRP8 204 aaKnown RBP24.65■■□□□ 1.54
ANKRD28-201ENST00000399451 C8orf37Q96NL8 207 aa24.64■■□□□ 1.54
ANKRD28-201ENST00000399451 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.64■■□□□ 1.54
ANKRD28-201ENST00000399451 CA8P35219 290 aa24.64■■□□□ 1.53
ANKRD28-201ENST00000399451 MTIF2P46199 727 aaKnown RBP24.64■■□□□ 1.53
ANKRD28-201ENST00000399451 TSHZ3Q63HK5 1081 aa24.64■■□□□ 1.53
ANKRD28-201ENST00000399451 KANK3Q6NY19 840 aa24.64■■□□□ 1.53
ANKRD28-201ENST00000399451 LRSAM1Q6UWE0 723 aa24.64■■□□□ 1.53
ANKRD28-201ENST00000399451 PDE4BQ07343 736 aa24.64■■□□□ 1.53
ANKRD28-201ENST00000399451 ZSCAN16Q9H4T2 348 aaPredicted RBP24.64■■□□□ 1.53
ANKRD28-201ENST00000399451 GOPCQ9HD26 462 aa24.64■■□□□ 1.53
ANKRD28-201ENST00000399451 SAMM50Q9Y512 469 aa24.64■■□□□ 1.53
ANKRD28-201ENST00000399451 KAT14Q9H8E8 782 aa24.63■■□□□ 1.53
ANKRD28-201ENST00000399451 TSPY2A6NKD2 308 aa24.63■■□□□ 1.53
ANKRD28-201ENST00000399451 ZSCAN22P10073 491 aaPredicted RBP24.63■■□□□ 1.53
ANKRD28-201ENST00000399451 AMPD3Q01432 767 aa24.63■■□□□ 1.53
ANKRD28-201ENST00000399451 ARHGAP45Q92619 1136 aa24.63■■□□□ 1.53
ANKRD28-201ENST00000399451 ORC3Q9UBD5 711 aaPredicted RBP24.63■■□□□ 1.53
ANKRD28-201ENST00000399451 METAP2P50579 478 aaKnown RBP eCLIP24.63■■□□□ 1.53
ANKRD28-201ENST00000399451 NCOA7Q8NI08 942 aa24.63■■□□□ 1.53
ANKRD28-201ENST00000399451 POLR3GO15318 223 aaPredicted RBP24.63■■□□□ 1.53
ANKRD28-201ENST00000399451 TMX3Q96JJ7 454 aa24.63■■□□□ 1.53
ANKRD28-201ENST00000399451 IDI1Q13907 227 aa24.63■■□□□ 1.53
ANKRD28-201ENST00000399451 CALML4Q96GE6 196 aa24.62■■□□□ 1.53
ANKRD28-201ENST00000399451 DENND4BO75064 1496 aaPredicted RBP24.62■■□□□ 1.53
ANKRD28-201ENST00000399451 CCDC144CPQ8IYA2 1237 aa24.62■■□□□ 1.53
ANKRD28-201ENST00000399451 C16orf71Q8IYS4 520 aaPredicted RBP24.62■■□□□ 1.53
ANKRD28-201ENST00000399451 FERMT2Q96AC1 680 aa24.62■■□□□ 1.53
ANKRD28-201ENST00000399451 FAM83GA6ND36 823 aa24.62■■□□□ 1.53
ANKRD28-201ENST00000399451 DNA2P51530 1060 aa24.62■■□□□ 1.53
ANKRD28-201ENST00000399451 FAM114A1Q8IWE2 563 aa24.62■■□□□ 1.53
ANKRD28-201ENST00000399451 CCDC12Q8WUD4 166 aaPredicted RBP24.62■■□□□ 1.53
ANKRD28-201ENST00000399451 CCDC152Q4G0S7 254 aa24.62■■□□□ 1.53
ANKRD28-201ENST00000399451 CEP135Q66GS9 1140 aa24.62■■□□□ 1.53
ANKRD28-201ENST00000399451 GSTO1P78417 241 aa24.61■■□□□ 1.53
ANKRD28-201ENST00000399451 HDAC9Q9UKV0 1011 aa24.61■■□□□ 1.53
ANKRD28-201ENST00000399451 GCOM1H8Y6P7 765 aaPredicted RBP24.61■■□□□ 1.53
ANKRD28-201ENST00000399451 MYZAPP0CAP1 466 aa24.61■■□□□ 1.53
ANKRD28-201ENST00000399451 ATP6V1AP38606 617 aa24.61■■□□□ 1.53
ANKRD28-201ENST00000399451 C14orf93Q9H972 538 aaKnown RBP24.61■■□□□ 1.53
ANKRD28-201ENST00000399451 KIF5BP33176 963 aa24.61■■□□□ 1.53
ANKRD28-201ENST00000399451 NAA15Q9BXJ9 866 aaKnown RBP24.6■■□□□ 1.53
ANKRD28-201ENST00000399451 TCP11L1Q9NUJ3 509 aa24.6■■□□□ 1.53
ANKRD28-201ENST00000399451 SETDB2Q96T68 719 aa24.6■■□□□ 1.53
ANKRD28-201ENST00000399451 PAXBP1Q9Y5B6 917 aa24.6■■□□□ 1.53
ANKRD28-201ENST00000399451 CCDC102BQ68D86 513 aa24.6■■□□□ 1.53
ANKRD28-201ENST00000399451 VTI1AQ96AJ9 217 aa24.6■■□□□ 1.53
ANKRD28-201ENST00000399451 SDSP20132 328 aa24.59■■□□□ 1.53
ANKRD28-201ENST00000399451 MICALCLQ6ZW33 695 aa24.59■■□□□ 1.53
ANKRD28-201ENST00000399451 SNRKQ9NRH2 765 aa24.59■■□□□ 1.53
ANKRD28-201ENST00000399451 PI4KAP2A4QPH2 592 aa24.59■■□□□ 1.53
ANKRD28-201ENST00000399451 PPP4R3BQ5MIZ7 849 aa24.59■■□□□ 1.53
ANKRD28-201ENST00000399451 PI4KAP1Q8N8J0 262 aa24.59■■□□□ 1.53
ANKRD28-201ENST00000399451 PRIMPOLQ96LW4 560 aa24.59■■□□□ 1.53
ANKRD28-201ENST00000399451 CALCOCO1Q9P1Z2 691 aa24.59■■□□□ 1.53
ANKRD28-201ENST00000399451 MFSD6Q6ZSS7 791 aa24.59■■□□□ 1.53
ANKRD28-201ENST00000399451 SNRPA1P09661 255 aaKnown RBP24.58■■□□□ 1.53
ANKRD28-201ENST00000399451 HAND2P61296 217 aa24.58■■□□□ 1.53
ANKRD28-201ENST00000399451 MICU3Q86XE3 530 aa24.58■■□□□ 1.53
ANKRD28-201ENST00000399451 RHPN1Q8TCX5 695 aa24.58■■□□□ 1.53
ANKRD28-201ENST00000399451 SLC26A6Q9BXS9 759 aa24.58■■□□□ 1.53
ANKRD28-201ENST00000399451 BCCIPQ9P287 314 aaKnown RBP eCLIP24.58■■□□□ 1.53
ANKRD28-201ENST00000399451 GSTTP1A0A1W2PQM5 241 aa24.58■■□□□ 1.53
ANKRD28-201ENST00000399451 ASXL1Q8IXJ9 1541 aa24.58■■□□□ 1.53
ANKRD28-201ENST00000399451 DYNC1I1O14576 645 aa24.58■■□□□ 1.52
ANKRD28-201ENST00000399451 UBE3BQ7Z3V4 1068 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms