RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NBPF15Q8N660 670 aa21.38■■□□□ 1.01
HLA-DQB1-204ENST00000399084 ATP5JP18859 108 aa21.38■■□□□ 1.01
HLA-DQB1-204ENST00000399084 PTPN12Q05209 780 aaKnown RBP21.38■■□□□ 1.01
HLA-DQB1-204ENST00000399084 MAP4K4O95819 1239 aaPredicted RBP21.37■■□□□ 1.01
HLA-DQB1-204ENST00000399084 PDIA4P13667 645 aaKnown RBP21.37■■□□□ 1.01
HLA-DQB1-204ENST00000399084 TRIM28Q13263 835 aaKnown RBP21.37■■□□□ 1.01
HLA-DQB1-204ENST00000399084 KLHL40Q2TBA0 621 aa21.37■■□□□ 1.01
HLA-DQB1-204ENST00000399084 TMOD3Q9NYL9 352 aa21.37■■□□□ 1.01
HLA-DQB1-204ENST00000399084 SNX14Q9Y5W7 946 aa21.37■■□□□ 1.01
HLA-DQB1-204ENST00000399084 EPHA10Q5JZY3 1008 aa21.36■■□□□ 1.01
HLA-DQB1-204ENST00000399084 FBXO3Q9UK99 471 aa21.36■■□□□ 1.01
HLA-DQB1-204ENST00000399084 SHANK3Q9BYB0 1731 aa21.36■■□□□ 1.01
HLA-DQB1-204ENST00000399084 ZKSCAN1P17029 563 aaPredicted RBP21.35■■□□□ 1.01
HLA-DQB1-204ENST00000399084 MRE11P49959 708 aa21.35■■□□□ 1.01
HLA-DQB1-204ENST00000399084 DDX54Q8TDD1 881 aaKnown RBP21.35■■□□□ 1.01
HLA-DQB1-204ENST00000399084 STRN4Q9NRL3 753 aa21.35■■□□□ 1.01
HLA-DQB1-204ENST00000399084 TNNI3KQ59H18 835 aa21.34■■□□□ 1.01
HLA-DQB1-204ENST00000399084 RNF20Q5VTR2 975 aa21.34■■□□□ 1.01
HLA-DQB1-204ENST00000399084 IL25Q9H293 177 aa21.34■■□□□ 1.01
HLA-DQB1-204ENST00000399084 FPGT-TNNI3KV9GXZ4 949 aa21.34■■□□□ 1.01
HLA-DQB1-204ENST00000399084 COL14A1Q05707 1796 aaKnown RBP21.33■■□□□ 1.01
HLA-DQB1-204ENST00000399084 ZGPATQ8N5A5 531 aaKnown RBP21.33■■□□□ 1.01
HLA-DQB1-204ENST00000399084 MAP4K1Q92918 833 aa21.33■■□□□ 1.01
HLA-DQB1-204ENST00000399084 ZSCAN31Q96LW9 406 aaPredicted RBP21.33■■□□□ 1.01
HLA-DQB1-204ENST00000399084 TTC14Q96N46 770 aa21.33■■□□□ 1.01
HLA-DQB1-204ENST00000399084 CCDC8Q9H0W5 538 aaPredicted RBP21.33■■□□□ 1.01
HLA-DQB1-204ENST00000399084 LIMCH1Q9UPQ0 1083 aa21.33■■□□□ 1.01
HLA-DQB1-204ENST00000399084 CCDC171Q6TFL3 1326 aa21.33■■□□□ 1.01
HLA-DQB1-204ENST00000399084 NUP188Q5SRE5 1749 aa21.33■■□□□ 1
HLA-DQB1-204ENST00000399084 STARD3NLO95772 234 aa21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 PSMA5P28066 241 aa21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 FOXO4P98177 505 aa21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 NECTIN1Q15223 517 aa21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 VPS53Q5VIR6 699 aa21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 SIL1Q9H173 461 aa21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 ATP5J2-PTCD1G3V325 749 aa21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 PTCD1O75127 700 aaKnown RBP21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 CIAO1O76071 339 aa21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 BRD1O95696 1058 aa21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 IL15P40933 162 aaPredicted RBP21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.32■■□□□ 1
HLA-DQB1-204ENST00000399084 LMBR1LQ6UX01 489 aa21.31■■□□□ 1
HLA-DQB1-204ENST00000399084 ISCA1Q9BUE6 129 aa21.31■■□□□ 1
HLA-DQB1-204ENST00000399084 CDCA7Q9BWT1 371 aaPredicted RBP21.31■■□□□ 1
HLA-DQB1-204ENST00000399084 ZSWIM6Q9HCJ5 1215 aa21.31■■□□□ 1
HLA-DQB1-204ENST00000399084 SH2B1Q9NRF2 756 aaPredicted RBP21.31■■□□□ 1
HLA-DQB1-204ENST00000399084 HMG20BQ9P0W2 317 aa21.31■■□□□ 1
HLA-DQB1-204ENST00000399084 LRP6O75581 1613 aa21.31■■□□□ 1
HLA-DQB1-204ENST00000399084 A1BGP04217 495 aa21.3■■□□□ 1
HLA-DQB1-204ENST00000399084 TCIRG1Q13488 830 aa21.3■■□□□ 1
HLA-DQB1-204ENST00000399084 TSGA10IPQ3SY00 556 aa21.3■■□□□ 1
HLA-DQB1-204ENST00000399084 FSD1Q9BTV5 496 aa21.3■■□□□ 1
HLA-DQB1-204ENST00000399084 ALDH8A1Q9H2A2 487 aaPredicted RBP21.3■■□□□ 1
HLA-DQB1-204ENST00000399084 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
HLA-DQB1-204ENST00000399084 UPF3BQ9BZI7 483 aaKnown RBP21.29■■□□□ 1
HLA-DQB1-204ENST00000399084 CYP46A1Q9Y6A2 500 aa21.29■■□□□ 1
HLA-DQB1-204ENST00000399084 DDX49Q9Y6V7 483 aaKnown RBP21.29■■□□□ 1
HLA-DQB1-204ENST00000399084 DISP2A7MBM2 1401 aa21.29■■□□□ 1
HLA-DQB1-204ENST00000399084 WDR33Q9C0J8 1336 aaKnown RBP21.29■■□□□ 1
HLA-DQB1-204ENST00000399084 TFCP2Q12800 502 aa21.29■■□□□ 1
HLA-DQB1-204ENST00000399084 HAUS7Q99871 368 aa21.29■■□□□ 1
HLA-DQB1-204ENST00000399084 BOLA2Q9H3K6 86 aa21.29■■□□□ 1
HLA-DQB1-204ENST00000399084 BTG4Q9NY30 223 aa21.29■■□□□ 1
HLA-DQB1-204ENST00000399084 ZDHHC9Q9Y397 364 aa21.29■■□□□ 1
HLA-DQB1-204ENST00000399084 COL22A1Q8NFW1 1626 aaPredicted RBP21.28■■□□□ 1
HLA-DQB1-204ENST00000399084 PIP4K2AP48426 406 aaPredicted RBP21.28■■□□□ 1
HLA-DQB1-204ENST00000399084 PLA2G12BQ9BX93 195 aa21.28■■□□□ 1
HLA-DQB1-204ENST00000399084 GZF1Q9H116 711 aaPredicted RBP21.28■■□□□ 1
HLA-DQB1-204ENST00000399084 DBNLQ9UJU6 430 aaKnown RBP21.28■■□□□ 1
HLA-DQB1-204ENST00000399084 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
HLA-DQB1-204ENST00000399084 JCADQ9P266 1359 aa21.27■■□□□ 1
HLA-DQB1-204ENST00000399084 NMIQ13287 307 aaPredicted RBP21.27■■□□□ 1
HLA-DQB1-204ENST00000399084 ANKRD1Q15327 319 aa21.27■■□□□ 1
HLA-DQB1-204ENST00000399084 HSP90AB3PQ58FF7 597 aa21.27■■□□□ 1
HLA-DQB1-204ENST00000399084 KIF6Q6ZMV9 814 aa21.27■■□□□ 1
HLA-DQB1-204ENST00000399084 RASEFQ8IZ41 740 aa21.27■■□□□ 1
HLA-DQB1-204ENST00000399084 KLHDC4Q8TBB5 520 aa21.27■■□□□ 1
HLA-DQB1-204ENST00000399084 LMBRD1Q9NUN5 540 aa21.27■■□□□ 1
HLA-DQB1-204ENST00000399084 MED23Q9ULK4 1368 aa21.27■■□□□ 1
HLA-DQB1-204ENST00000399084 PTH1RQ03431 593 aa21.26■□□□□ 0.99
HLA-DQB1-204ENST00000399084 KRT32Q14532 448 aa21.26■□□□□ 0.99
HLA-DQB1-204ENST00000399084 MCTP1Q6DN14 999 aa21.26■□□□□ 0.99
HLA-DQB1-204ENST00000399084 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.26■□□□□ 0.99
HLA-DQB1-204ENST00000399084 TLR7Q9NYK1 1049 aaKnown RBP21.26■□□□□ 0.99
HLA-DQB1-204ENST00000399084 RUFY3Q7L099 469 aa21.26■□□□□ 0.99
HLA-DQB1-204ENST00000399084 RBM8AQ9Y5S9 174 aaKnown RBP21.26■□□□□ 0.99
HLA-DQB1-204ENST00000399084 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.26■□□□□ 0.99
HLA-DQB1-204ENST00000399084 PLCH1Q4KWH8 1693 aa21.25■□□□□ 0.99
HLA-DQB1-204ENST00000399084 EYA2O00167 538 aa21.25■□□□□ 0.99
HLA-DQB1-204ENST00000399084 MBD3O95983 291 aa21.25■□□□□ 0.99
HLA-DQB1-204ENST00000399084 PCCAP05165 728 aaPredicted RBP21.25■□□□□ 0.99
HLA-DQB1-204ENST00000399084 KCNJ4P48050 445 aa21.25■□□□□ 0.99
HLA-DQB1-204ENST00000399084 USPL1Q5W0Q7 1092 aa21.25■□□□□ 0.99
HLA-DQB1-204ENST00000399084 CREB3L3Q68CJ9 461 aa21.25■□□□□ 0.99
HLA-DQB1-204ENST00000399084 PIGBQ92521 554 aa21.25■□□□□ 0.99
HLA-DQB1-204ENST00000399084 TOGARAM1Q9Y4F4 1720 aa21.25■□□□□ 0.99
HLA-DQB1-204ENST00000399084 CASTP20810 708 aaKnown RBP21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 AK2P54819 239 aa21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 PRPF40BQ6NWY9 871 aaKnown RBP21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 PDRG1Q9NUG6 133 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms