RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.33
CSGALNACT1-202ENST00000397998 TTLL5Q6EMB2 1281 aa13.02□□□□□ -0.33
CSGALNACT1-202ENST00000397998 SSH3Q8TE77 659 aa13.02□□□□□ -0.33
CSGALNACT1-202ENST00000397998 NEMFO60524 1076 aa13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 Q6ZUG5 572 aa13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 DDX46Q7L014 1031 aaKnown RBP13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 PNPLA6Q8IY17 1366 aa13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 LARGE1O95461 756 aa13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 POLR3DP05423 398 aaPredicted RBP13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 SNW1Q13573 536 aaKnown RBP13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 RAB11FIP4Q86YS3 637 aa13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 AOPEPQ8N6M6 819 aa13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 STAP2Q9UGK3 403 aa13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 FLT4P35916 1363 aa13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 GOLGA6L1Q8N7Z2 621 aa13.01□□□□□ -0.33
CSGALNACT1-202ENST00000397998 AOX1Q06278 1338 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 CCDC69A6NI79 296 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 POLR3GO15318 223 aaPredicted RBP13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 DHX16O60231 1041 aaKnown RBP13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 KRT222Q8N1A0 295 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 ZNF75DP51815 510 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 KIAA1524Q8TCG1 905 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 LEO1Q8WVC0 666 aaPredicted RBP13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 HYPKQ9NX55 129 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 NRBP1Q9UHY1 535 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 USP16Q9Y5T5 823 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 LRRC7Q96NW7 1537 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 SSH2Q76I76 1423 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 KIF2AO00139 706 aaPredicted RBP13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 SLC27A2O14975 620 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 LSG1Q9H089 658 aaKnown RBP13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 ZSCAN16Q9H4T2 348 aaPredicted RBP13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 U3KPZ7 1027 aaPredicted RBP13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 TULP4Q9NRJ4 1543 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 MED14O60244 1454 aa13□□□□□ -0.33
CSGALNACT1-202ENST00000397998 CEP152O94986 1710 aa12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 CAVIN2O95810 425 aa12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 KLHDC4Q8TBB5 520 aa12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 TMX1Q9H3N1 280 aa12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 HMG20BQ9P0W2 317 aa12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 TMCO3Q6UWJ1 677 aa12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 TPCN1Q9ULQ1 816 aa12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 JAK2O60674 1132 aa12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 FEZ1Q99689 392 aa12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 OGFRQ9NZT2 677 aa12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 HOOK1Q9UJC3 728 aaKnown RBP12.99□□□□□ -0.33
CSGALNACT1-202ENST00000397998 QRICH2Q9H0J4 1663 aa12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 GRM8O00222 908 aa12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 CCP110O43303 1012 aa12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 GOLIM4O00461 696 aa12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 RASSF8Q8NHQ8 419 aa12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 ERCC4Q92889 916 aaPredicted RBP12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 CCDC85AQ96PX6 553 aaPredicted RBP12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 ZCCHC11Q5TAX3 1644 aaKnown RBP12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 AK9Q5TCS8 1911 aa12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 SLC3A2P08195 630 aaKnown RBP12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 CEBPAP49715 358 aaPredicted RBP12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 GSDMDP57764 484 aa12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 CHST3Q7LGC8 479 aa12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
CSGALNACT1-202ENST00000397998 ATP5J2-PTCD1G3V325 749 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 PTCD1O75127 700 aaKnown RBP12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 NR1I2O75469 434 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 TPM1P09493 284 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 CLSTN2Q9H4D0 955 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 NDUFB9Q9Y6M9 179 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 HAND2P61296 217 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 SAFBQ15424 915 aaKnown RBP eCLIP12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 ZSCAN25Q6NSZ9 544 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 UBE3BQ7Z3V4 1068 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 SYTL4Q96C24 671 aaPredicted RBP12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 EDC3Q96F86 508 aaKnown RBP12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 RPS6KB1P23443 525 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 KSR2Q6VAB6 950 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
CSGALNACT1-202ENST00000397998 SLU7O95391 586 aaKnown RBP12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 AKAP17AQ02040 695 aaKnown RBP12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 CCDC129Q6ZRS4 1044 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 GLI2P10070 1586 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 TTC21AQ8NDW8 1320 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 CFAP74Q9C0B2 1584 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 EPB41L2O43491 1005 aaKnown RBP12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 PIP4K2AP48426 406 aaPredicted RBP12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 TAF3Q5VWG9 929 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 JMYQ8N9B5 988 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 ALDH1L1O75891 902 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 KIF20AO95235 890 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 GTF2F1P35269 517 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 APOBRQ0VD83 1088 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 HSP90AA4PQ58FG1 418 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 BICC1Q9H694 974 aaKnown RBP12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 DNAI1Q9UI46 699 aa12.96□□□□□ -0.33
CSGALNACT1-202ENST00000397998 A0A087WZG4 1122 aa12.96□□□□□ -0.34
CSGALNACT1-202ENST00000397998 LMOD1P29536 600 aaPredicted RBP12.96□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ZNF397Q8NF99 534 aaPredicted RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms