RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 TNNT1P13805 278 aa20.56■□□□□ 0.88
EWSR1-206ENST00000397938 DNAAF4Q8WXU2 420 aa20.56■□□□□ 0.88
EWSR1-206ENST00000397938 PIK3C2AO00443 1686 aa20.56■□□□□ 0.88
EWSR1-206ENST00000397938 MTX1Q13505 466 aa20.55■□□□□ 0.88
EWSR1-206ENST00000397938 EVI5LQ96CN4 794 aa20.55■□□□□ 0.88
EWSR1-206ENST00000397938 GPATCH3Q96I76 525 aa20.55■□□□□ 0.88
EWSR1-206ENST00000397938 SPATA32Q96LK8 384 aa20.55■□□□□ 0.88
EWSR1-206ENST00000397938 CTNNA3Q9UI47 895 aa20.55■□□□□ 0.88
EWSR1-206ENST00000397938 PAXBP1Q9Y5B6 917 aa20.55■□□□□ 0.88
EWSR1-206ENST00000397938 GOLGA6L4A6NEF3 574 aa20.54■□□□□ 0.88
EWSR1-206ENST00000397938 PSMA5P28066 241 aa20.54■□□□□ 0.88
EWSR1-206ENST00000397938 LEO1Q8WVC0 666 aaPredicted RBP20.54■□□□□ 0.88
EWSR1-206ENST00000397938 MAP4K1Q92918 833 aa20.54■□□□□ 0.88
EWSR1-206ENST00000397938 MLECQ14165 292 aa20.54■□□□□ 0.88
EWSR1-206ENST00000397938 CGNQ9P2M7 1197 aaKnown RBP20.53■□□□□ 0.88
EWSR1-206ENST00000397938 PI4KAP2A4QPH2 592 aa20.53■□□□□ 0.88
EWSR1-206ENST00000397938 SLC27A2O14975 620 aa20.53■□□□□ 0.88
EWSR1-206ENST00000397938 KCNJ4P48050 445 aa20.53■□□□□ 0.88
EWSR1-206ENST00000397938 PI4KAP1Q8N8J0 262 aa20.53■□□□□ 0.88
EWSR1-206ENST00000397938 EIF2S2P20042 333 aaKnown RBP20.52■□□□□ 0.88
EWSR1-206ENST00000397938 COL9A3Q14050 684 aaPredicted RBP20.52■□□□□ 0.88
EWSR1-206ENST00000397938 ANKRD1Q15327 319 aa20.52■□□□□ 0.88
EWSR1-206ENST00000397938 TMEM2Q9UHN6 1383 aa20.52■□□□□ 0.88
EWSR1-206ENST00000397938 DIP2BQ9P265 1576 aa20.52■□□□□ 0.88
EWSR1-206ENST00000397938 CDC25BP30305 580 aa20.52■□□□□ 0.88
EWSR1-206ENST00000397938 ZNF165P49910 485 aa20.52■□□□□ 0.88
EWSR1-206ENST00000397938 CCDC112Q8NEF3 446 aa20.52■□□□□ 0.88
EWSR1-206ENST00000397938 CACTINQ8WUQ7 758 aaKnown RBP20.52■□□□□ 0.88
EWSR1-206ENST00000397938 SNRKQ9NRH2 765 aa20.52■□□□□ 0.88
EWSR1-206ENST00000397938 CHPF2Q9P2E5 772 aa20.52■□□□□ 0.88
EWSR1-206ENST00000397938 CLIP2Q9UDT6 1046 aa20.52■□□□□ 0.88
EWSR1-206ENST00000397938 IFIT2P09913 472 aaKnown RBP20.51■□□□□ 0.87
EWSR1-206ENST00000397938 LARP1Q6PKG0 1096 aaKnown RBP20.51■□□□□ 0.87
EWSR1-206ENST00000397938 TFIP11Q9UBB9 837 aaKnown RBP20.51■□□□□ 0.87
EWSR1-206ENST00000397938 HIP1O00291 1037 aa20.51■□□□□ 0.87
EWSR1-206ENST00000397938 FAM227BQ96M60 508 aa20.51■□□□□ 0.87
EWSR1-206ENST00000397938 DNAJC25Q9H1X3 360 aa20.51■□□□□ 0.87
EWSR1-206ENST00000397938 ALDH8A1Q9H2A2 487 aaPredicted RBP20.51■□□□□ 0.87
EWSR1-206ENST00000397938 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
EWSR1-206ENST00000397938 NR1I2O75469 434 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 HOXC9P31274 260 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 NMIQ13287 307 aaPredicted RBP20.5■□□□□ 0.87
EWSR1-206ENST00000397938 BLOC1S2Q6QNY1 142 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 ERC1Q8IUD2 1116 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 NPHP4O75161 1426 aaPredicted RBP20.5■□□□□ 0.87
EWSR1-206ENST00000397938 ADCY9O60503 1353 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 HOXB7P09629 217 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 TPD52L1Q16890 204 aaPredicted RBP20.5■□□□□ 0.87
EWSR1-206ENST00000397938 CCDC144BQ3MJ40 725 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 UBR1Q8IWV7 1749 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 CCDC144CPQ8IYA2 1237 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 PGBD1Q96JS3 809 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 DDX41Q9UJV9 622 aaKnown RBP20.5■□□□□ 0.87
EWSR1-206ENST00000397938 KDM3BQ7LBC6 1761 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 RPS6KB1P23443 525 aa20.5■□□□□ 0.87
EWSR1-206ENST00000397938 EIF4A1P60842 406 aaKnown RBP20.5■□□□□ 0.87
EWSR1-206ENST00000397938 CEMIPQ8WUJ3 1361 aa20.49■□□□□ 0.87
EWSR1-206ENST00000397938 CAVIN2O95810 425 aa20.49■□□□□ 0.87
EWSR1-206ENST00000397938 GABPB1Q06547 395 aaPredicted RBP20.49■□□□□ 0.87
EWSR1-206ENST00000397938 TOB2Q14106 344 aaPredicted RBP20.49■□□□□ 0.87
EWSR1-206ENST00000397938 BICD2Q8TD16 824 aa20.49■□□□□ 0.87
EWSR1-206ENST00000397938 NAA30Q147X3 362 aaPredicted RBP20.48■□□□□ 0.87
EWSR1-206ENST00000397938 AACSQ86V21 672 aa20.48■□□□□ 0.87
EWSR1-206ENST00000397938 TCEANC2Q96MN5 208 aa20.48■□□□□ 0.87
EWSR1-206ENST00000397938 RNF20Q5VTR2 975 aa20.48■□□□□ 0.87
EWSR1-206ENST00000397938 PODXL2Q9NZ53 605 aa20.48■□□□□ 0.87
EWSR1-206ENST00000397938 PA2G4Q9UQ80 394 aaKnown RBP20.48■□□□□ 0.87
EWSR1-206ENST00000397938 MARF1Q9Y4F3 1742 aaKnown RBP20.47■□□□□ 0.87
EWSR1-206ENST00000397938 IGSF3O75054 1194 aa20.47■□□□□ 0.87
EWSR1-206ENST00000397938 GIGYF1O75420 1035 aaPredicted RBP20.47■□□□□ 0.87
EWSR1-206ENST00000397938 CEP135Q66GS9 1140 aa20.47■□□□□ 0.87
EWSR1-206ENST00000397938 SARM1Q6SZW1 724 aa20.47■□□□□ 0.87
EWSR1-206ENST00000397938 MED23Q9ULK4 1368 aa20.47■□□□□ 0.87
EWSR1-206ENST00000397938 RGPD8O14715 1765 aaPredicted RBP20.47■□□□□ 0.87
EWSR1-206ENST00000397938 NGDNQ8NEJ9 315 aaKnown RBP20.47■□□□□ 0.87
EWSR1-206ENST00000397938 CHMP4AQ9BY43 222 aa20.47■□□□□ 0.87
EWSR1-206ENST00000397938 MORC2Q9Y6X9 1032 aaPredicted RBP20.46■□□□□ 0.87
EWSR1-206ENST00000397938 JCADQ9P266 1359 aa20.46■□□□□ 0.87
EWSR1-206ENST00000397938 A0A0D9SFI3 127 aa20.46■□□□□ 0.87
EWSR1-206ENST00000397938 IQCB1Q15051 598 aa20.46■□□□□ 0.87
EWSR1-206ENST00000397938 LRRC8AQ8IWT6 810 aa20.46■□□□□ 0.87
EWSR1-206ENST00000397938 TAF6LQ9Y6J9 622 aa20.46■□□□□ 0.87
EWSR1-206ENST00000397938 TNRQ92752 1358 aa20.45■□□□□ 0.86
EWSR1-206ENST00000397938 RBM6P78332 1123 aaKnown RBP20.45■□□□□ 0.86
EWSR1-206ENST00000397938 RESTQ13127 1097 aa20.45■□□□□ 0.86
EWSR1-206ENST00000397938 NEMFO60524 1076 aa20.45■□□□□ 0.86
EWSR1-206ENST00000397938 KIF18AQ8NI77 898 aa20.45■□□□□ 0.86
EWSR1-206ENST00000397938 MRFAP1L1Q96HT8 127 aa20.45■□□□□ 0.86
EWSR1-206ENST00000397938 ANXA1P04083 346 aa20.44■□□□□ 0.86
EWSR1-206ENST00000397938 NLRP6P59044 892 aa20.44■□□□□ 0.86
EWSR1-206ENST00000397938 ZNF771Q7L3S4 317 aaPredicted RBP20.44■□□□□ 0.86
EWSR1-206ENST00000397938 PLEKHG1Q9ULL1 1385 aa20.44■□□□□ 0.86
EWSR1-206ENST00000397938 GOLGA6L19H0YKK7 550 aa20.44■□□□□ 0.86
EWSR1-206ENST00000397938 STK3Q13188 491 aa20.44■□□□□ 0.86
EWSR1-206ENST00000397938 HMG20BQ9P0W2 317 aa20.44■□□□□ 0.86
EWSR1-206ENST00000397938 ALDH1L1O75891 902 aa20.43■□□□□ 0.86
EWSR1-206ENST00000397938 TSGA10IPQ3SY00 556 aa20.43■□□□□ 0.86
EWSR1-206ENST00000397938 C9orf78Q9NZ63 289 aaPredicted RBP20.43■□□□□ 0.86
EWSR1-206ENST00000397938 USP54Q70EL1 1684 aa20.43■□□□□ 0.86
EWSR1-206ENST00000397938 NYAP1Q6ZVC0 841 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms