RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 USP44Q9H0E7 712 aa19.16■□□□□ 0.66
SUMO3-203ENST00000397898 IBTKQ9P2D0 1353 aaPredicted RBP19.16■□□□□ 0.66
SUMO3-203ENST00000397898 PSDA5PKW4 1024 aaPredicted RBP19.15■□□□□ 0.66
SUMO3-203ENST00000397898 ZBTB7BO15156 539 aaPredicted RBP19.15■□□□□ 0.66
SUMO3-203ENST00000397898 SUSD4Q5VX71 490 aa19.15■□□□□ 0.66
SUMO3-203ENST00000397898 MSL1Q68DK7 614 aa19.15■□□□□ 0.66
SUMO3-203ENST00000397898 SLC16A10Q8TF71 515 aa19.15■□□□□ 0.66
SUMO3-203ENST00000397898 C9orf78Q9NZ63 289 aaPredicted RBP19.15■□□□□ 0.66
SUMO3-203ENST00000397898 AFDNP55196 1824 aaKnown RBP19.15■□□□□ 0.66
SUMO3-203ENST00000397898 GRM8O00222 908 aa19.14■□□□□ 0.66
SUMO3-203ENST00000397898 TM4SF1P30408 202 aa19.14■□□□□ 0.66
SUMO3-203ENST00000397898 MEIS3Q99687 375 aa19.14■□□□□ 0.66
SUMO3-203ENST00000397898 PPP1R42Q7Z4L9 355 aa19.14■□□□□ 0.65
SUMO3-203ENST00000397898 EXOC6Q8TAG9 804 aa19.14■□□□□ 0.65
SUMO3-203ENST00000397898 CARMIL3Q8ND23 1372 aa19.13■□□□□ 0.65
SUMO3-203ENST00000397898 FAM177BA6PVY3 158 aa19.13■□□□□ 0.65
SUMO3-203ENST00000397898 NBPF7P0C2Y1 421 aaPredicted RBP19.13■□□□□ 0.65
SUMO3-203ENST00000397898 ERICH6BQ5W0A0 696 aa19.13■□□□□ 0.65
SUMO3-203ENST00000397898 CASZ1Q86V15 1759 aa19.12■□□□□ 0.65
SUMO3-203ENST00000397898 UTP14AQ9BVJ6 771 aaKnown RBP19.12■□□□□ 0.65
SUMO3-203ENST00000397898 CHMP4BQ9H444 224 aaKnown RBP19.12■□□□□ 0.65
SUMO3-203ENST00000397898 TRMT112Q9UI30 125 aaKnown RBP19.12■□□□□ 0.65
SUMO3-203ENST00000397898 UTYO14607 1347 aa19.12■□□□□ 0.65
SUMO3-203ENST00000397898 H7C1W4 665 aa19.11■□□□□ 0.65
SUMO3-203ENST00000397898 NTSR2O95665 410 aa19.11■□□□□ 0.65
SUMO3-203ENST00000397898 RTL5Q5HYW3 569 aaPredicted RBP19.11■□□□□ 0.65
SUMO3-203ENST00000397898 UBE3BQ7Z3V4 1068 aa19.11■□□□□ 0.65
SUMO3-203ENST00000397898 ZBTB38Q8NAP3 1195 aaPredicted RBP19.11■□□□□ 0.65
SUMO3-203ENST00000397898 JARID2Q92833 1246 aaPredicted RBP19.11■□□□□ 0.65
SUMO3-203ENST00000397898 FAM89AQ96GI7 184 aa19.11■□□□□ 0.65
SUMO3-203ENST00000397898 COL24A1Q17RW2 1714 aa19.11■□□□□ 0.65
SUMO3-203ENST00000397898 PCCAP05165 728 aaPredicted RBP19.11■□□□□ 0.65
SUMO3-203ENST00000397898 GNAI3P08754 354 aa19.11■□□□□ 0.65
SUMO3-203ENST00000397898 MMP10P09238 476 aa19.11■□□□□ 0.65
SUMO3-203ENST00000397898 DDR1Q08345 913 aa19.11■□□□□ 0.65
SUMO3-203ENST00000397898 NBPF5PQ86XG9 351 aaPredicted RBP19.11■□□□□ 0.65
SUMO3-203ENST00000397898 ZBTB40Q9NUA8 1239 aa19.11■□□□□ 0.65
SUMO3-203ENST00000397898 POLRMTO00411 1230 aaKnown RBP19.1■□□□□ 0.65
SUMO3-203ENST00000397898 UBTFL1P0CB47 393 aaPredicted RBP19.1■□□□□ 0.65
SUMO3-203ENST00000397898 NYXQ9GZU5 481 aa19.1■□□□□ 0.65
SUMO3-203ENST00000397898 ZBTB7AO95365 584 aa19.09■□□□□ 0.65
SUMO3-203ENST00000397898 SERPINB2P05120 415 aa19.09■□□□□ 0.65
SUMO3-203ENST00000397898 CASP7P55210 303 aa19.09■□□□□ 0.65
SUMO3-203ENST00000397898 TPTE2Q6XPS3 522 aa19.09■□□□□ 0.65
SUMO3-203ENST00000397898 SYNE4Q8N205 404 aa19.09■□□□□ 0.65
SUMO3-203ENST00000397898 SH3TC1Q8TE82 1336 aa19.09■□□□□ 0.65
SUMO3-203ENST00000397898 NUTM1Q86Y26 1132 aa19.09■□□□□ 0.65
SUMO3-203ENST00000397898 GTF2E1P29083 439 aaPredicted RBP19.08■□□□□ 0.64
SUMO3-203ENST00000397898 MTFR1LQ9H019 292 aa19.08■□□□□ 0.64
SUMO3-203ENST00000397898 PARP3Q9Y6F1 533 aa19.08■□□□□ 0.64
SUMO3-203ENST00000397898 NPHP1O15259 732 aa19.07■□□□□ 0.64
SUMO3-203ENST00000397898 ERFEQ4G0M1 354 aa19.07■□□□□ 0.64
SUMO3-203ENST00000397898 CNBD1Q8NA66 436 aa19.07■□□□□ 0.64
SUMO3-203ENST00000397898 C1orf115Q9H7X2 142 aa19.07■□□□□ 0.64
SUMO3-203ENST00000397898 LRRFIP2Q9Y608 721 aaKnown RBP19.07■□□□□ 0.64
SUMO3-203ENST00000397898 CDHR2Q9BYE9 1310 aa19.07■□□□□ 0.64
SUMO3-203ENST00000397898 IRS4O14654 1257 aaPredicted RBP19.06■□□□□ 0.64
SUMO3-203ENST00000397898 GNAI2P04899 355 aa19.06■□□□□ 0.64
SUMO3-203ENST00000397898 SUCLG2Q96I99 432 aa19.06■□□□□ 0.64
SUMO3-203ENST00000397898 HDAC5Q9UQL6 1122 aa19.06■□□□□ 0.64
SUMO3-203ENST00000397898 AAMPQ13685 434 aa19.06■□□□□ 0.64
SUMO3-203ENST00000397898 PRR5LQ6MZQ0 368 aa19.06■□□□□ 0.64
SUMO3-203ENST00000397898 ATF5Q9Y2D1 282 aaPredicted RBP19.06■□□□□ 0.64
SUMO3-203ENST00000397898 KAZALD1Q96I82 304 aa19.05■□□□□ 0.64
SUMO3-203ENST00000397898 CCDC24Q8N4L8 307 aa19.04■□□□□ 0.64
SUMO3-203ENST00000397898 ABCC12Q96J65 1359 aa19.04■□□□□ 0.64
SUMO3-203ENST00000397898 HCLS1P14317 486 aaPredicted RBP19.04■□□□□ 0.64
SUMO3-203ENST00000397898 EPHA10Q5JZY3 1008 aa19.04■□□□□ 0.64
SUMO3-203ENST00000397898 SLC10A5Q5PT55 438 aa19.04■□□□□ 0.64
SUMO3-203ENST00000397898 PLA2G12BQ9BX93 195 aa19.04■□□□□ 0.64
SUMO3-203ENST00000397898 NRXN2Q9P2S2 1712 aa19.03■□□□□ 0.64
SUMO3-203ENST00000397898 HSP90B1P14625 803 aaKnown RBP19.03■□□□□ 0.64
SUMO3-203ENST00000397898 ST5P78524 1137 aa19.03■□□□□ 0.64
SUMO3-203ENST00000397898 BICC1Q9H694 974 aaKnown RBP19.03■□□□□ 0.64
SUMO3-203ENST00000397898 PDE8AO60658 829 aa19.02■□□□□ 0.64
SUMO3-203ENST00000397898 FOXO4P98177 505 aa19.02■□□□□ 0.64
SUMO3-203ENST00000397898 POLD1P28340 1107 aa19.01■□□□□ 0.63
SUMO3-203ENST00000397898 DDX60Q8IY21 1712 aaKnown RBP19.01■□□□□ 0.63
SUMO3-203ENST00000397898 ANKRD44Q8N8A2 993 aa19.01■□□□□ 0.63
SUMO3-203ENST00000397898 PCDHB15Q9Y5E8 787 aa19.01■□□□□ 0.63
SUMO3-203ENST00000397898 CTSWP56202 376 aa19■□□□□ 0.63
SUMO3-203ENST00000397898 RABL6Q3YEC7 729 aaPredicted RBP19■□□□□ 0.63
SUMO3-203ENST00000397898 CEP85Q6P2H3 762 aa19■□□□□ 0.63
SUMO3-203ENST00000397898 LAMB2P55268 1798 aa18.99■□□□□ 0.63
SUMO3-203ENST00000397898 LMBR1LQ6UX01 489 aa18.99■□□□□ 0.63
SUMO3-203ENST00000397898 NLRP3Q96P20 1036 aa18.99■□□□□ 0.63
SUMO3-203ENST00000397898 SGIP1Q9BQI5 828 aa18.99■□□□□ 0.63
SUMO3-203ENST00000397898 PPP4R2Q9NY27 417 aa18.99■□□□□ 0.63
SUMO3-203ENST00000397898 RIC1Q4ADV7 1423 aa18.99■□□□□ 0.63
SUMO3-203ENST00000397898 PTGER2P43116 358 aa18.98■□□□□ 0.63
SUMO3-203ENST00000397898 C3orf67Q6ZVT6 689 aa18.98■□□□□ 0.63
SUMO3-203ENST00000397898 TTLL11Q8NHH1 800 aa18.98■□□□□ 0.63
SUMO3-203ENST00000397898 CSF1RP07333 972 aa18.98■□□□□ 0.63
SUMO3-203ENST00000397898 MTX1Q13505 466 aa18.98■□□□□ 0.63
SUMO3-203ENST00000397898 RPAP2Q8IXW5 612 aaPredicted RBP18.98■□□□□ 0.63
SUMO3-203ENST00000397898 BRIP1Q9BX63 1249 aa18.98■□□□□ 0.63
SUMO3-203ENST00000397898 SPON1Q9HCB6 807 aa18.98■□□□□ 0.63
SUMO3-203ENST00000397898 CCDC85AQ96PX6 553 aaPredicted RBP18.97■□□□□ 0.63
SUMO3-203ENST00000397898 CHMP3Q9Y3E7 222 aa18.97■□□□□ 0.63
SUMO3-203ENST00000397898 TNRC6CQ9HCJ0 1690 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms