RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CTNNA3Q9UI47 895 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 IGKV5-2P06315 115 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 GTF2E1P29083 439 aaPredicted RBP7.08□□□□□ -1.28
PTPRD-206ENST00000397617 ZNF335Q9H4Z2 1342 aaPredicted RBP7.08□□□□□ -1.28
PTPRD-206ENST00000397617 ANKRD36CQ5JPF3 1778 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 L1TD1Q5T7N2 865 aaKnown RBP7.08□□□□□ -1.28
PTPRD-206ENST00000397617 TMC4Q7Z404 712 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 CSF1RP07333 972 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 EVCP57679 992 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 VPS72Q15906 364 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 G2E3Q7L622 706 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 RIC3Q7Z5B4 369 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 FAM184AQ8NB25 1140 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 CNTNAP4Q9C0A0 1308 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 SHANK3Q9BYB0 1731 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 MED23Q9ULK4 1368 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 EYA2O00167 538 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 IFIT2P09913 472 aaKnown RBP7.07□□□□□ -1.28
PTPRD-206ENST00000397617 NFATC2IPQ8NCF5 419 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 LTV1Q96GA3 475 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-206ENST00000397617 C5P01031 1676 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 SEMA3EO15041 775 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 ROBO1Q9Y6N7 1651 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 SH3TC1Q8TE82 1336 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 MAP3K15Q6ZN16 1313 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 SLC4A10Q6U841 1118 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 DIAPH3Q9NSV4 1193 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 CEP126Q9P2H0 1117 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 NUP188Q5SRE5 1749 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 EIF5P55010 431 aaKnown RBP7.07□□□□□ -1.28
PTPRD-206ENST00000397617 TTF1Q15361 905 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-206ENST00000397617 PI4K2BQ8TCG2 481 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 XAGE3Q8WTP9 111 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 LLPHQ9BRT6 129 aaKnown RBP7.07□□□□□ -1.28
PTPRD-206ENST00000397617 LRP5O75197 1615 aa7.07□□□□□ -1.28
PTPRD-206ENST00000397617 ITGB4P16144 1822 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 CYP2E1P05181 493 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-206ENST00000397617 GSPT1P15170 499 aaKnown RBP7.06□□□□□ -1.28
PTPRD-206ENST00000397617 RAB3GAP1Q15042 981 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 COPS6Q7L5N1 327 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 KBTBD3Q8NAB2 608 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 NBPF7P0C2Y1 421 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-206ENST00000397617 CDC5LQ99459 802 aaKnown RBP7.06□□□□□ -1.28
PTPRD-206ENST00000397617 ARFGEF2Q9Y6D5 1785 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 UQCRFS1P1P0C7P4 283 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 ZBTB38Q8NAP3 1195 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-206ENST00000397617 MAP3K2Q9Y2U5 619 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-206ENST00000397617 ATRNO75882 1429 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 RFX5P48382 616 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-206ENST00000397617 MORC2Q9Y6X9 1032 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-206ENST00000397617 VPS53Q5VIR6 699 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 MAP4K1Q92918 833 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 SYAP1Q96A49 352 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-206ENST00000397617 MSH5O43196 834 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 KLHL40Q2TBA0 621 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 AGXT2Q9BYV1 514 aa7.06□□□□□ -1.28
PTPRD-206ENST00000397617 WDR33Q9C0J8 1336 aaKnown RBP7.06□□□□□ -1.28
PTPRD-206ENST00000397617 MCM4P33991 863 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 EVA1CP58658 441 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 TMEM87AQ8NBN3 555 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 DSCC1Q9BVC3 393 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 SPATA31A5Q5VU36 1347 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 SPATA31A7Q8IWB4 1347 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 DHX8Q14562 1220 aaKnown RBP7.05□□□□□ -1.28
PTPRD-206ENST00000397617 U3KPZ7 1027 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-206ENST00000397617 SPATA31A1Q5TZJ5 1347 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 HMGN5P82970 282 aaKnown RBP7.05□□□□□ -1.28
PTPRD-206ENST00000397617 SLC10A5Q5PT55 438 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 PNMA6EA0A0J9YXQ4 647 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 HS1BP3Q53T59 392 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 KAZALD1Q96I82 304 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 HELLSQ9NRZ9 838 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 MAP4K4O95819 1239 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-206ENST00000397617 ALX1Q15699 326 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 KIF2CQ99661 725 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 GIMAP6Q6P9H5 292 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 KIF6Q6ZMV9 814 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 SOX12O15370 315 aa7.05□□□□□ -1.28
PTPRD-206ENST00000397617 HAUS7Q99871 368 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 EXOC6BQ9Y2D4 811 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 HSPA2P54652 639 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 DDB1Q16531 1140 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 KRT24Q2M2I5 525 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 TNNQ9UQP3 1299 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 NUP98P52948 1817 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 HSP90AA1P07900 732 aaKnown RBP7.04□□□□□ -1.28
PTPRD-206ENST00000397617 PHF14O94880 888 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 UBE3CQ15386 1083 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 MROH5Q6ZUA9 1318 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 DHX16O60231 1041 aaKnown RBP7.04□□□□□ -1.28
PTPRD-206ENST00000397617 NFKBIBQ15653 356 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 LIMCH1Q9UPQ0 1083 aa7.04□□□□□ -1.28
PTPRD-206ENST00000397617 ELP1O95163 1332 aa7.03□□□□□ -1.28
PTPRD-206ENST00000397617 F6X3S4 739 aa7.03□□□□□ -1.28
PTPRD-206ENST00000397617 PTPN12Q05209 780 aaKnown RBP7.03□□□□□ -1.28
PTPRD-206ENST00000397617 PHAXQ9H814 394 aaKnown RBP7.03□□□□□ -1.28
PTPRD-206ENST00000397617 USP16Q9Y5T5 823 aa7.03□□□□□ -1.28
PTPRD-206ENST00000397617 MYH7P12883 1935 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms