RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SRP68Q9UHB9 627 aaKnown RBP29.53■■■□□ 2.32
TSPAN4-202ENST00000397396 NIP7Q9Y221 180 aaKnown RBP eCLIP29.53■■■□□ 2.32
TSPAN4-202ENST00000397396 GPTP24298 496 aa29.52■■■□□ 2.32
TSPAN4-202ENST00000397396 PPP1R42Q7Z4L9 355 aa29.52■■■□□ 2.32
TSPAN4-202ENST00000397396 PCCAP05165 728 aaPredicted RBP29.51■■■□□ 2.32
TSPAN4-202ENST00000397396 NBPF7P0C2Y1 421 aaPredicted RBP29.51■■■□□ 2.32
TSPAN4-202ENST00000397396 RPAP2Q8IXW5 612 aaPredicted RBP29.51■■■□□ 2.32
TSPAN4-202ENST00000397396 BCL2L12Q9HB09 334 aa29.51■■■□□ 2.32
TSPAN4-202ENST00000397396 TUBGCP6Q96RT7 1819 aa29.51■■■□□ 2.32
TSPAN4-202ENST00000397396 H7C1W4 665 aa29.5■■■□□ 2.31
TSPAN4-202ENST00000397396 HSP90B1P14625 803 aaKnown RBP29.5■■■□□ 2.31
TSPAN4-202ENST00000397396 ZBTB38Q8NAP3 1195 aaPredicted RBP29.5■■■□□ 2.31
TSPAN4-202ENST00000397396 ANO8Q9HCE9 1232 aaPredicted RBP29.5■■■□□ 2.31
TSPAN4-202ENST00000397396 SMIM5Q71RC9 77 aa29.49■■■□□ 2.31
TSPAN4-202ENST00000397396 PNPLA7Q6ZV29 1317 aa29.49■■■□□ 2.31
TSPAN4-202ENST00000397396 UBE3BQ7Z3V4 1068 aa29.48■■■□□ 2.31
TSPAN4-202ENST00000397396 SETDB2Q96T68 719 aa29.48■■■□□ 2.31
TSPAN4-202ENST00000397396 UBN2Q6ZU65 1347 aa29.48■■■□□ 2.31
TSPAN4-202ENST00000397396 GYS1P13807 737 aa29.47■■■□□ 2.31
TSPAN4-202ENST00000397396 COL23A1Q86Y22 540 aaPredicted RBP29.47■■■□□ 2.31
TSPAN4-202ENST00000397396 UTP14AQ9BVJ6 771 aaKnown RBP29.47■■■□□ 2.31
TSPAN4-202ENST00000397396 NYXQ9GZU5 481 aa29.47■■■□□ 2.31
TSPAN4-202ENST00000397396 RWDD1Q9H446 243 aaPredicted RBP29.47■■■□□ 2.31
TSPAN4-202ENST00000397396 C1orf115Q9H7X2 142 aa29.47■■■□□ 2.31
TSPAN4-202ENST00000397396 TRMT112Q9UI30 125 aaKnown RBP29.47■■■□□ 2.31
TSPAN4-202ENST00000397396 LRRFIP2Q9Y608 721 aaKnown RBP29.47■■■□□ 2.31
TSPAN4-202ENST00000397396 CDHR2Q9BYE9 1310 aa29.47■■■□□ 2.31
TSPAN4-202ENST00000397396 MSH5O43196 834 aa29.46■■■□□ 2.31
TSPAN4-202ENST00000397396 HMMRO75330 724 aa29.46■■■□□ 2.31
TSPAN4-202ENST00000397396 PCDHB15Q9Y5E8 787 aa29.46■■■□□ 2.31
TSPAN4-202ENST00000397396 CARMIL3Q8ND23 1372 aa29.46■■■□□ 2.31
TSPAN4-202ENST00000397396 HDAC1Q13547 482 aaPredicted RBP29.45■■■□□ 2.31
TSPAN4-202ENST00000397396 TBC1D9BQ66K14 1250 aa29.45■■■□□ 2.31
TSPAN4-202ENST00000397396 NLGN1Q8N2Q7 840 aa29.45■■■□□ 2.31
TSPAN4-202ENST00000397396 ANKRD44Q8N8A2 993 aa29.45■■■□□ 2.31
TSPAN4-202ENST00000397396 COL24A1Q17RW2 1714 aa29.45■■■□□ 2.31
TSPAN4-202ENST00000397396 CASP7P55210 303 aa29.45■■■□□ 2.3
TSPAN4-202ENST00000397396 CEP85Q6P2H3 762 aa29.45■■■□□ 2.3
TSPAN4-202ENST00000397396 SH3TC1Q8TE82 1336 aa29.45■■■□□ 2.3
TSPAN4-202ENST00000397396 SUSD4Q5VX71 490 aa29.44■■■□□ 2.3
TSPAN4-202ENST00000397396 SUCLG2Q96I99 432 aa29.44■■■□□ 2.3
TSPAN4-202ENST00000397396 NTSR2O95665 410 aa29.42■■■□□ 2.3
TSPAN4-202ENST00000397396 MTX1Q13505 466 aa29.42■■■□□ 2.3
TSPAN4-202ENST00000397396 BICDL1Q6ZP65 573 aa29.42■■■□□ 2.3
TSPAN4-202ENST00000397396 PLA2G12BQ9BX93 195 aa29.42■■■□□ 2.3
TSPAN4-202ENST00000397396 ATP8B2P98198 1209 aa29.41■■■□□ 2.3
TSPAN4-202ENST00000397396 B4GALNT3Q6L9W6 998 aa29.41■■■□□ 2.3
TSPAN4-202ENST00000397396 NFIXQ14938 502 aa29.4■■■□□ 2.3
TSPAN4-202ENST00000397396 TPTE2Q6XPS3 522 aa29.4■■■□□ 2.3
TSPAN4-202ENST00000397396 CENPQQ7L2Z9 268 aaPredicted RBP29.4■■■□□ 2.3
TSPAN4-202ENST00000397396 FAM89AQ96GI7 184 aa29.4■■■□□ 2.3
TSPAN4-202ENST00000397396 NBPF5PQ86XG9 351 aaPredicted RBP29.39■■■□□ 2.3
TSPAN4-202ENST00000397396 BICC1Q9H694 974 aaKnown RBP29.39■■■□□ 2.3
TSPAN4-202ENST00000397396 IRS4O14654 1257 aaPredicted RBP29.38■■■□□ 2.29
TSPAN4-202ENST00000397396 GTF2E1P29083 439 aaPredicted RBP29.38■■■□□ 2.29
TSPAN4-202ENST00000397396 RABL6Q3YEC7 729 aaPredicted RBP29.38■■■□□ 2.29
TSPAN4-202ENST00000397396 SLC16A10Q8TF71 515 aa29.38■■■□□ 2.29
TSPAN4-202ENST00000397396 LAMB2P55268 1798 aa29.36■■■□□ 2.29
TSPAN4-202ENST00000397396 NPHP1O15259 732 aa29.36■■■□□ 2.29
TSPAN4-202ENST00000397396 PDE8AO60658 829 aa29.36■■■□□ 2.29
TSPAN4-202ENST00000397396 TM4SF1P30408 202 aa29.36■■■□□ 2.29
TSPAN4-202ENST00000397396 RTL5Q5HYW3 569 aaPredicted RBP29.36■■■□□ 2.29
TSPAN4-202ENST00000397396 KAZALD1Q96I82 304 aa29.36■■■□□ 2.29
TSPAN4-202ENST00000397396 FAM177BA6PVY3 158 aa29.35■■■□□ 2.29
TSPAN4-202ENST00000397396 SRGAP3O43295 1099 aa29.35■■■□□ 2.29
TSPAN4-202ENST00000397396 JARID2Q92833 1246 aaPredicted RBP29.35■■■□□ 2.29
TSPAN4-202ENST00000397396 SIRT2Q8IXJ6 389 aa29.34■■■□□ 2.29
TSPAN4-202ENST00000397396 SSH3Q8TE77 659 aa29.34■■■□□ 2.29
TSPAN4-202ENST00000397396 GCC1Q96CN9 775 aa29.34■■■□□ 2.29
TSPAN4-202ENST00000397396 RIC1Q4ADV7 1423 aa29.33■■■□□ 2.29
TSPAN4-202ENST00000397396 FOXO4P98177 505 aa29.33■■■□□ 2.29
TSPAN4-202ENST00000397396 CNBD1Q8NA66 436 aa29.33■■■□□ 2.29
TSPAN4-202ENST00000397396 KDM2BQ8NHM5 1336 aa29.32■■■□□ 2.28
TSPAN4-202ENST00000397396 CTSWP56202 376 aa29.32■■■□□ 2.28
TSPAN4-202ENST00000397396 POLA2Q14181 598 aa29.32■■■□□ 2.28
TSPAN4-202ENST00000397396 IGHDP01880 384 aa29.31■■■□□ 2.28
TSPAN4-202ENST00000397396 ST5P78524 1137 aa29.31■■■□□ 2.28
TSPAN4-202ENST00000397396 SLC10A5Q5PT55 438 aa29.31■■■□□ 2.28
TSPAN4-202ENST00000397396 LMBR1LQ6UX01 489 aa29.31■■■□□ 2.28
TSPAN4-202ENST00000397396 PNMA6EA0A0J9YXQ4 647 aa29.3■■■□□ 2.28
TSPAN4-202ENST00000397396 POLRMTO00411 1230 aaKnown RBP29.3■■■□□ 2.28
TSPAN4-202ENST00000397396 SERPINB2P05120 415 aa29.3■■■□□ 2.28
TSPAN4-202ENST00000397396 EPHA10Q5JZY3 1008 aa29.3■■■□□ 2.28
TSPAN4-202ENST00000397396 NUTM1Q86Y26 1132 aa29.3■■■□□ 2.28
TSPAN4-202ENST00000397396 PARP3Q9Y6F1 533 aa29.3■■■□□ 2.28
TSPAN4-202ENST00000397396 MYH3P11055 1940 aa29.29■■■□□ 2.28
TSPAN4-202ENST00000397396 CSF1RP07333 972 aa29.29■■■□□ 2.28
TSPAN4-202ENST00000397396 ERFEQ4G0M1 354 aa29.29■■■□□ 2.28
TSPAN4-202ENST00000397396 HSP90AB4PQ58FF6 505 aa29.29■■■□□ 2.28
TSPAN4-202ENST00000397396 DDX60Q8IY21 1712 aaKnown RBP29.27■■■□□ 2.28
TSPAN4-202ENST00000397396 CCDC152Q4G0S7 254 aa29.27■■■□□ 2.28
TSPAN4-202ENST00000397396 SMC5Q8IY18 1101 aa29.27■■■□□ 2.28
TSPAN4-202ENST00000397396 DCTPP1Q9H773 170 aa29.27■■■□□ 2.28
TSPAN4-202ENST00000397396 CHMP3Q9Y3E7 222 aa29.27■■■□□ 2.28
TSPAN4-202ENST00000397396 MMP10P09238 476 aa29.26■■■□□ 2.27
TSPAN4-202ENST00000397396 HCLS1P14317 486 aaPredicted RBP29.26■■■□□ 2.27
TSPAN4-202ENST00000397396 DDR1Q08345 913 aa29.26■■■□□ 2.27
TSPAN4-202ENST00000397396 CCDC57Q2TAC2 916 aa29.26■■■□□ 2.27
TSPAN4-202ENST00000397396 SYNE4Q8N205 404 aa29.26■■■□□ 2.27
TSPAN4-202ENST00000397396 RTL9Q8NET4 1388 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms