RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 C8orf34Q49A92 452 aa18.67■□□□□ 0.58
CAPN3-207ENST00000397200 NEURL1BA8MQ27 555 aa18.65■□□□□ 0.58
CAPN3-207ENST00000397200 ISCA1Q9BUE6 129 aa18.65■□□□□ 0.58
CAPN3-207ENST00000397200 BCL2L12Q9HB09 334 aa18.65■□□□□ 0.58
CAPN3-207ENST00000397200 GPTP24298 496 aa18.64■□□□□ 0.57
CAPN3-207ENST00000397200 GYS1P13807 737 aa18.63■□□□□ 0.57
CAPN3-207ENST00000397200 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
CAPN3-207ENST00000397200 ZNF34Q8IZ26 560 aa18.63■□□□□ 0.57
CAPN3-207ENST00000397200 CCDC191Q8NCU4 936 aa18.63■□□□□ 0.57
CAPN3-207ENST00000397200 CHMP4BQ9H444 224 aaKnown RBP18.63■□□□□ 0.57
CAPN3-207ENST00000397200 CWC25Q9NXE8 425 aaPredicted RBP18.63■□□□□ 0.57
CAPN3-207ENST00000397200 NIP7Q9Y221 180 aaKnown RBP eCLIP18.63■□□□□ 0.57
CAPN3-207ENST00000397200 RGS3P49796 1198 aa18.63■□□□□ 0.57
CAPN3-207ENST00000397200 IPO9Q96P70 1041 aaKnown RBP18.63■□□□□ 0.57
CAPN3-207ENST00000397200 IBTKQ9P2D0 1353 aaPredicted RBP18.63■□□□□ 0.57
CAPN3-207ENST00000397200 GCKRQ14397 625 aa18.62■□□□□ 0.57
CAPN3-207ENST00000397200 PARP10Q53GL7 1025 aa18.62■□□□□ 0.57
CAPN3-207ENST00000397200 TBC1D9BQ66K14 1250 aa18.62■□□□□ 0.57
CAPN3-207ENST00000397200 BICDL1Q6ZP65 573 aa18.62■□□□□ 0.57
CAPN3-207ENST00000397200 NLRP10Q86W26 655 aa18.62■□□□□ 0.57
CAPN3-207ENST00000397200 C9orf78Q9NZ63 289 aaPredicted RBP18.62■□□□□ 0.57
CAPN3-207ENST00000397200 SMC5Q8IY18 1101 aa18.61■□□□□ 0.57
CAPN3-207ENST00000397200 PDZRN3Q9UPQ7 1066 aa18.61■□□□□ 0.57
CAPN3-207ENST00000397200 UBN2Q6ZU65 1347 aa18.61■□□□□ 0.57
CAPN3-207ENST00000397200 GRM8O00222 908 aa18.6■□□□□ 0.57
CAPN3-207ENST00000397200 ZBTB7BO15156 539 aaPredicted RBP18.6■□□□□ 0.57
CAPN3-207ENST00000397200 SETDB2Q96T68 719 aa18.6■□□□□ 0.57
CAPN3-207ENST00000397200 MEIS3Q99687 375 aa18.6■□□□□ 0.57
CAPN3-207ENST00000397200 ANP32EQ9BTT0 268 aa18.6■□□□□ 0.57
CAPN3-207ENST00000397200 USP44Q9H0E7 712 aa18.6■□□□□ 0.57
CAPN3-207ENST00000397200 GNAI3P08754 354 aa18.6■□□□□ 0.57
CAPN3-207ENST00000397200 NLGN1Q8N2Q7 840 aa18.6■□□□□ 0.57
CAPN3-207ENST00000397200 COL24A1Q17RW2 1714 aa18.59■□□□□ 0.57
CAPN3-207ENST00000397200 PPP1R42Q7Z4L9 355 aa18.59■□□□□ 0.57
CAPN3-207ENST00000397200 UBTFL1P0CB47 393 aaPredicted RBP18.58■□□□□ 0.56
CAPN3-207ENST00000397200 NFIXQ14938 502 aa18.58■□□□□ 0.56
CAPN3-207ENST00000397200 R3HDM1Q15032 1099 aaKnown RBP18.58■□□□□ 0.56
CAPN3-207ENST00000397200 SUSD4Q5VX71 490 aa18.58■□□□□ 0.56
CAPN3-207ENST00000397200 CARMIL3Q8ND23 1372 aa18.57■□□□□ 0.56
CAPN3-207ENST00000397200 FAM177BA6PVY3 158 aa18.57■□□□□ 0.56
CAPN3-207ENST00000397200 NBPF7P0C2Y1 421 aaPredicted RBP18.57■□□□□ 0.56
CAPN3-207ENST00000397200 UBE3BQ7Z3V4 1068 aa18.57■□□□□ 0.56
CAPN3-207ENST00000397200 UTP14AQ9BVJ6 771 aaKnown RBP18.57■□□□□ 0.56
CAPN3-207ENST00000397200 TRMT112Q9UI30 125 aaKnown RBP18.57■□□□□ 0.56
CAPN3-207ENST00000397200 UTYO14607 1347 aa18.57■□□□□ 0.56
CAPN3-207ENST00000397200 CASZ1Q86V15 1759 aa18.56■□□□□ 0.56
CAPN3-207ENST00000397200 PCCAP05165 728 aaPredicted RBP18.56■□□□□ 0.56
CAPN3-207ENST00000397200 MSL1Q68DK7 614 aa18.56■□□□□ 0.56
CAPN3-207ENST00000397200 ZBTB38Q8NAP3 1195 aaPredicted RBP18.56■□□□□ 0.56
CAPN3-207ENST00000397200 SLC16A10Q8TF71 515 aa18.56■□□□□ 0.56
CAPN3-207ENST00000397200 PDGFDQ9GZP0 370 aaPredicted RBP18.56■□□□□ 0.56
CAPN3-207ENST00000397200 HDAC5Q9UQL6 1122 aa18.56■□□□□ 0.56
CAPN3-207ENST00000397200 H7C1W4 665 aa18.56■□□□□ 0.56
CAPN3-207ENST00000397200 TM4SF1P30408 202 aa18.56■□□□□ 0.56
CAPN3-207ENST00000397200 NBPF5PQ86XG9 351 aaPredicted RBP18.56■□□□□ 0.56
CAPN3-207ENST00000397200 JARID2Q92833 1246 aaPredicted RBP18.56■□□□□ 0.56
CAPN3-207ENST00000397200 NYXQ9GZU5 481 aa18.56■□□□□ 0.56
CAPN3-207ENST00000397200 NOP58Q9Y2X3 529 aaKnown RBP18.56■□□□□ 0.56
CAPN3-207ENST00000397200 NTSR2O95665 410 aa18.55■□□□□ 0.56
CAPN3-207ENST00000397200 GNAI2P04899 355 aa18.55■□□□□ 0.56
CAPN3-207ENST00000397200 RTL5Q5HYW3 569 aaPredicted RBP18.55■□□□□ 0.56
CAPN3-207ENST00000397200 FAM89AQ96GI7 184 aa18.55■□□□□ 0.56
CAPN3-207ENST00000397200 SH3TC1Q8TE82 1336 aa18.54■□□□□ 0.56
CAPN3-207ENST00000397200 PSDA5PKW4 1024 aaPredicted RBP18.53■□□□□ 0.56
CAPN3-207ENST00000397200 NPHP1O15259 732 aa18.53■□□□□ 0.56
CAPN3-207ENST00000397200 GTF2E1P29083 439 aaPredicted RBP18.53■□□□□ 0.56
CAPN3-207ENST00000397200 CASP7P55210 303 aa18.53■□□□□ 0.56
CAPN3-207ENST00000397200 TPTE2Q6XPS3 522 aa18.53■□□□□ 0.56
CAPN3-207ENST00000397200 C1orf115Q9H7X2 142 aa18.53■□□□□ 0.56
CAPN3-207ENST00000397200 LRRFIP2Q9Y608 721 aaKnown RBP18.53■□□□□ 0.56
CAPN3-207ENST00000397200 CDHR2Q9BYE9 1310 aa18.53■□□□□ 0.56
CAPN3-207ENST00000397200 MMP10P09238 476 aa18.52■□□□□ 0.56
CAPN3-207ENST00000397200 DDR1Q08345 913 aa18.52■□□□□ 0.56
CAPN3-207ENST00000397200 SUCLG2Q96I99 432 aa18.52■□□□□ 0.56
CAPN3-207ENST00000397200 POLRMTO00411 1230 aaKnown RBP18.52■□□□□ 0.55
CAPN3-207ENST00000397200 SERPINB2P05120 415 aa18.52■□□□□ 0.55
CAPN3-207ENST00000397200 NUTM1Q86Y26 1132 aa18.52■□□□□ 0.55
CAPN3-207ENST00000397200 PARP3Q9Y6F1 533 aa18.52■□□□□ 0.55
CAPN3-207ENST00000397200 LAMB2P55268 1798 aa18.51■□□□□ 0.55
CAPN3-207ENST00000397200 SOCS7O14512 581 aa18.51■□□□□ 0.55
CAPN3-207ENST00000397200 IRS4O14654 1257 aaPredicted RBP18.51■□□□□ 0.55
CAPN3-207ENST00000397200 SYNE4Q8N205 404 aa18.51■□□□□ 0.55
CAPN3-207ENST00000397200 CNBD1Q8NA66 436 aa18.51■□□□□ 0.55
CAPN3-207ENST00000397200 MYH3P11055 1940 aa18.51■□□□□ 0.55
CAPN3-207ENST00000397200 DDX60Q8IY21 1712 aaKnown RBP18.51■□□□□ 0.55
CAPN3-207ENST00000397200 HSP90B1P14625 803 aaKnown RBP18.5■□□□□ 0.55
CAPN3-207ENST00000397200 NUCB1Q02818 461 aa18.5■□□□□ 0.55
CAPN3-207ENST00000397200 ERFEQ4G0M1 354 aa18.5■□□□□ 0.55
CAPN3-207ENST00000397200 NRXN2Q9P2S2 1712 aa18.49■□□□□ 0.55
CAPN3-207ENST00000397200 ZBTB7AO95365 584 aa18.49■□□□□ 0.55
CAPN3-207ENST00000397200 GCC1Q96CN9 775 aa18.49■□□□□ 0.55
CAPN3-207ENST00000397200 MTFR1LQ9H019 292 aa18.49■□□□□ 0.55
CAPN3-207ENST00000397200 ST5P78524 1137 aa18.49■□□□□ 0.55
CAPN3-207ENST00000397200 PRR5LQ6MZQ0 368 aa18.49■□□□□ 0.55
CAPN3-207ENST00000397200 DDRGK1Q96HY6 314 aa18.49■□□□□ 0.55
CAPN3-207ENST00000397200 KAZALD1Q96I82 304 aa18.49■□□□□ 0.55
CAPN3-207ENST00000397200 PLA2G12BQ9BX93 195 aa18.49■□□□□ 0.55
CAPN3-207ENST00000397200 BICC1Q9H694 974 aaKnown RBP18.49■□□□□ 0.55
CAPN3-207ENST00000397200 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
CAPN3-207ENST00000397200 ERICH6Q7L0X2 663 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms