RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
MCF2L-209ENST00000397036 BICC1Q9H694 974 aaKnown RBP16.92■□□□□ 0.3
MCF2L-209ENST00000397036 TAF1LQ8IZX4 1826 aa16.92■□□□□ 0.3
MCF2L-209ENST00000397036 RAB11FIP3O75154 756 aa16.91■□□□□ 0.3
MCF2L-209ENST00000397036 SSFA2P28290 1259 aa16.91■□□□□ 0.3
MCF2L-209ENST00000397036 HSP90AB4PQ58FF6 505 aa16.91■□□□□ 0.3
MCF2L-209ENST00000397036 CHD1LQ86WJ1 897 aa16.91■□□□□ 0.3
MCF2L-209ENST00000397036 ARHGEF1Q92888 912 aaKnown RBP16.91■□□□□ 0.3
MCF2L-209ENST00000397036 HSP90B1P14625 803 aaKnown RBP16.91■□□□□ 0.3
MCF2L-209ENST00000397036 FOXO4P98177 505 aa16.91■□□□□ 0.3
MCF2L-209ENST00000397036 C4BP0C0L5 1744 aa16.9■□□□□ 0.3
MCF2L-209ENST00000397036 ZPR1O75312 459 aa16.9■□□□□ 0.3
MCF2L-209ENST00000397036 EPHA10Q5JZY3 1008 aa16.9■□□□□ 0.3
MCF2L-209ENST00000397036 ANKRD45Q5TZF3 282 aa16.9■□□□□ 0.3
MCF2L-209ENST00000397036 UBN2Q6ZU65 1347 aa16.89■□□□□ 0.3
MCF2L-209ENST00000397036 GPTP24298 496 aa16.89■□□□□ 0.29
MCF2L-209ENST00000397036 BCL2L12Q9HB09 334 aa16.89■□□□□ 0.29
MCF2L-209ENST00000397036 USP42Q9H9J4 1324 aaKnown RBP16.89■□□□□ 0.29
MCF2L-209ENST00000397036 NUP98P52948 1817 aa16.88■□□□□ 0.29
MCF2L-209ENST00000397036 CSF1RP07333 972 aa16.88■□□□□ 0.29
MCF2L-209ENST00000397036 RFC4P35249 363 aa16.88■□□□□ 0.29
MCF2L-209ENST00000397036 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
MCF2L-209ENST00000397036 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
MCF2L-209ENST00000397036 UTP14AQ9BVJ6 771 aaKnown RBP16.88■□□□□ 0.29
MCF2L-209ENST00000397036 COPRSQ9NQ92 184 aa16.88■□□□□ 0.29
MCF2L-209ENST00000397036 TRMT112Q9UI30 125 aaKnown RBP16.88■□□□□ 0.29
MCF2L-209ENST00000397036 NIP7Q9Y221 180 aaKnown RBP eCLIP16.88■□□□□ 0.29
MCF2L-209ENST00000397036 SUSD4Q5VX71 490 aa16.87■□□□□ 0.29
MCF2L-209ENST00000397036 AMIGO3Q86WK7 504 aa16.87■□□□□ 0.29
MCF2L-209ENST00000397036 CCDC125Q86Z20 511 aa16.87■□□□□ 0.29
MCF2L-209ENST00000397036 CAMKK2Q96RR4 588 aa16.87■□□□□ 0.29
MCF2L-209ENST00000397036 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-209ENST00000397036 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
MCF2L-209ENST00000397036 EP400Q96L91 3159 aa16.86■□□□□ 0.29
MCF2L-209ENST00000397036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.86■□□□□ 0.29
MCF2L-209ENST00000397036 SURF6O75683 361 aaKnown RBP16.86■□□□□ 0.29
MCF2L-209ENST00000397036 RFX5P48382 616 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-209ENST00000397036 USPL1Q5W0Q7 1092 aa16.86■□□□□ 0.29
MCF2L-209ENST00000397036 LMBR1LQ6UX01 489 aa16.86■□□□□ 0.29
MCF2L-209ENST00000397036 ERC1Q8IUD2 1116 aa16.86■□□□□ 0.29
MCF2L-209ENST00000397036 FAM89AQ96GI7 184 aa16.86■□□□□ 0.29
MCF2L-209ENST00000397036 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-209ENST00000397036 SH3TC1Q8TE82 1336 aa16.86■□□□□ 0.29
MCF2L-209ENST00000397036 AFDNP55196 1824 aaKnown RBP16.86■□□□□ 0.29
MCF2L-209ENST00000397036 PDE8AO60658 829 aa16.86■□□□□ 0.29
MCF2L-209ENST00000397036 JARID2Q92833 1246 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-209ENST00000397036 LRRCC1Q9C099 1032 aa16.86■□□□□ 0.29
MCF2L-209ENST00000397036 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
MCF2L-209ENST00000397036 IRS4O14654 1257 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-209ENST00000397036 NTSR2O95665 410 aa16.85■□□□□ 0.29
MCF2L-209ENST00000397036 PDE4AP27815 886 aa16.85■□□□□ 0.29
MCF2L-209ENST00000397036 KIF1BPQ96EK5 621 aa16.85■□□□□ 0.29
MCF2L-209ENST00000397036 LNPKQ9C0E8 428 aa16.85■□□□□ 0.29
MCF2L-209ENST00000397036 EXOC6BQ9Y2D4 811 aa16.85■□□□□ 0.29
MCF2L-209ENST00000397036 ANKRD36CQ5JPF3 1778 aa16.85■□□□□ 0.29
MCF2L-209ENST00000397036 BCORQ6W2J9 1755 aa16.84■□□□□ 0.29
MCF2L-209ENST00000397036 TNS1Q9HBL0 1735 aaKnown RBP16.84■□□□□ 0.29
MCF2L-209ENST00000397036 PTPN12Q05209 780 aaKnown RBP16.84■□□□□ 0.29
MCF2L-209ENST00000397036 SLC10A5Q5PT55 438 aa16.84■□□□□ 0.29
MCF2L-209ENST00000397036 SETDB2Q96T68 719 aa16.84■□□□□ 0.29
MCF2L-209ENST00000397036 NYXQ9GZU5 481 aa16.84■□□□□ 0.29
MCF2L-209ENST00000397036 SRP68Q9UHB9 627 aaKnown RBP16.84■□□□□ 0.29
MCF2L-209ENST00000397036 SF3B2Q13435 895 aaKnown RBP16.83■□□□□ 0.28
MCF2L-209ENST00000397036 TBC1D9BQ66K14 1250 aa16.83■□□□□ 0.28
MCF2L-209ENST00000397036 RHPN1Q8TCX5 695 aa16.83■□□□□ 0.28
MCF2L-209ENST00000397036 BAG6P46379 1132 aa16.82■□□□□ 0.28
MCF2L-209ENST00000397036 RGS3P49796 1198 aa16.82■□□□□ 0.28
MCF2L-209ENST00000397036 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
MCF2L-209ENST00000397036 RTL5Q5HYW3 569 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-209ENST00000397036 TTLL11Q8NHH1 800 aa16.82■□□□□ 0.28
MCF2L-209ENST00000397036 UBR3Q6ZT12 1888 aa16.82■□□□□ 0.28
MCF2L-209ENST00000397036 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
MCF2L-209ENST00000397036 CTSWP56202 376 aa16.81■□□□□ 0.28
MCF2L-209ENST00000397036 SMIM5Q71RC9 77 aa16.81■□□□□ 0.28
MCF2L-209ENST00000397036 SKAP1Q86WV1 359 aa16.81■□□□□ 0.28
MCF2L-209ENST00000397036 OSBPL3Q9H4L5 887 aa16.81■□□□□ 0.28
MCF2L-209ENST00000397036 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
MCF2L-209ENST00000397036 CIAO1O76071 339 aa16.8■□□□□ 0.28
MCF2L-209ENST00000397036 PHF14O94880 888 aa16.8■□□□□ 0.28
MCF2L-209ENST00000397036 GYS1P13807 737 aa16.8■□□□□ 0.28
MCF2L-209ENST00000397036 ZNF827Q17R98 1081 aa16.8■□□□□ 0.28
MCF2L-209ENST00000397036 CCDC57Q2TAC2 916 aa16.8■□□□□ 0.28
MCF2L-209ENST00000397036 TPTE2Q6XPS3 522 aa16.8■□□□□ 0.28
MCF2L-209ENST00000397036 SYNE4Q8N205 404 aa16.8■□□□□ 0.28
MCF2L-209ENST00000397036 RTL9Q8NET4 1388 aa16.8■□□□□ 0.28
MCF2L-209ENST00000397036 TM4SF1P30408 202 aa16.8■□□□□ 0.28
MCF2L-209ENST00000397036 EN1Q05925 392 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-209ENST00000397036 PLEKHM2Q8IWE5 1019 aa16.8■□□□□ 0.28
MCF2L-209ENST00000397036 PA2G4Q9UQ80 394 aaKnown RBP16.8■□□□□ 0.28
MCF2L-209ENST00000397036 IFIT5Q13325 482 aaKnown RBP16.79■□□□□ 0.28
MCF2L-209ENST00000397036 NFIXQ14938 502 aa16.79■□□□□ 0.28
MCF2L-209ENST00000397036 SF3B3Q15393 1217 aaKnown RBP16.79■□□□□ 0.28
MCF2L-209ENST00000397036 EZH2Q15910 746 aaKnown RBP16.79■□□□□ 0.28
MCF2L-209ENST00000397036 STAP2Q9UGK3 403 aa16.79■□□□□ 0.28
MCF2L-209ENST00000397036 SALL3Q9BXA9 1300 aa16.78■□□□□ 0.28
MCF2L-209ENST00000397036 SMARCA5O60264 1052 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-209ENST00000397036 OS9Q13438 667 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-209ENST00000397036 NLGN1Q8N2Q7 840 aa16.78■□□□□ 0.28
MCF2L-209ENST00000397036 CARMIL3Q8ND23 1372 aa16.78■□□□□ 0.28
MCF2L-209ENST00000397036 EYA2O00167 538 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms