RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 FGD5Q6ZNL6 1462 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 EVI5LQ96CN4 794 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 DHX29Q7Z478 1369 aaKnown RBP15.99■□□□□ 0.15
COL4A3-202ENST00000396578 LRSAM1Q6UWE0 723 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 C9orf84Q5VXU9 1444 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 CTAGE15A4D2H0 777 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 CTAGE8P0CG41 777 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 CTAGE6Q86UF2 777 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 CTAGE4Q8IX94 777 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 SMC6Q96SB8 1091 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 ZMYND15Q9H091 742 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 CCDC121Q6ZUS5 278 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 TTC31Q49AM3 519 aaPredicted RBP15.99■□□□□ 0.15
COL4A3-202ENST00000396578 N4BP3O15049 544 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 SLC5A1P13866 664 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 PRPHP41219 470 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 UBA7P41226 1012 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 SF3B2Q13435 895 aaKnown RBP15.99■□□□□ 0.15
COL4A3-202ENST00000396578 KLHL40Q2TBA0 621 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 ATRIPQ8WXE1 791 aa15.99■□□□□ 0.15
COL4A3-202ENST00000396578 NOL3O60936 208 aaKnown RBP15.98■□□□□ 0.15
COL4A3-202ENST00000396578 TFIP11Q9UBB9 837 aaKnown RBP15.98■□□□□ 0.15
COL4A3-202ENST00000396578 CYB5RLQ6IPT4 315 aa15.98■□□□□ 0.15
COL4A3-202ENST00000396578 SLF2Q8IX21 1173 aa15.98■□□□□ 0.15
COL4A3-202ENST00000396578 TRIM47Q96LD4 638 aa15.98■□□□□ 0.15
COL4A3-202ENST00000396578 RBM27Q9P2N5 1060 aaKnown RBP15.98■□□□□ 0.15
COL4A3-202ENST00000396578 CEP83Q9Y592 693 aa15.98■□□□□ 0.15
COL4A3-202ENST00000396578 CHMP4BP1P59074 171 aa15.98■□□□□ 0.15
COL4A3-202ENST00000396578 MICALL1Q8N3F8 863 aa15.98■□□□□ 0.15
COL4A3-202ENST00000396578 IFIT5Q13325 482 aaKnown RBP15.98■□□□□ 0.15
COL4A3-202ENST00000396578 SRRTQ9BXP5 876 aaKnown RBP15.98■□□□□ 0.15
COL4A3-202ENST00000396578 CFTRP13569 1480 aa15.97■□□□□ 0.15
COL4A3-202ENST00000396578 ZBTB16Q05516 673 aa15.97■□□□□ 0.15
COL4A3-202ENST00000396578 UBE2Q2Q8WVN8 375 aa15.97■□□□□ 0.15
COL4A3-202ENST00000396578 CCDC129Q6ZRS4 1044 aa15.97■□□□□ 0.15
COL4A3-202ENST00000396578 APBB1IPQ7Z5R6 666 aaPredicted RBP15.97■□□□□ 0.15
COL4A3-202ENST00000396578 GOLGA1Q92805 767 aa15.97■□□□□ 0.15
COL4A3-202ENST00000396578 OTUD6BQ8N6M0 293 aa15.97■□□□□ 0.15
COL4A3-202ENST00000396578 AKR1B10O60218 316 aa15.97■□□□□ 0.15
COL4A3-202ENST00000396578 CAPN2P17655 700 aa15.97■□□□□ 0.15
COL4A3-202ENST00000396578 CCDC174Q6PII3 467 aa15.97■□□□□ 0.15
COL4A3-202ENST00000396578 ANAPC4Q9UJX5 808 aa15.97■□□□□ 0.15
COL4A3-202ENST00000396578 SYKP43405 635 aa15.96■□□□□ 0.15
COL4A3-202ENST00000396578 TMEM67Q5HYA8 995 aa15.96■□□□□ 0.15
COL4A3-202ENST00000396578 CCDC77Q9BR77 488 aa15.96■□□□□ 0.15
COL4A3-202ENST00000396578 ABCC11Q96J66 1382 aa15.96■□□□□ 0.15
COL4A3-202ENST00000396578 IDEP14735 1019 aa15.96■□□□□ 0.15
COL4A3-202ENST00000396578 CEP57Q86XR8 500 aa15.96■□□□□ 0.15
COL4A3-202ENST00000396578 IARSP41252 1262 aaKnown RBP15.96■□□□□ 0.15
COL4A3-202ENST00000396578 FAM69CQ0P6D2 419 aa15.96■□□□□ 0.15
COL4A3-202ENST00000396578 SYNCQ9H7C4 482 aa15.96■□□□□ 0.15
COL4A3-202ENST00000396578 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.15
COL4A3-202ENST00000396578 HMG20BQ9P0W2 317 aa15.96■□□□□ 0.15
COL4A3-202ENST00000396578 SYNJ2O15056 1496 aa15.96■□□□□ 0.15
COL4A3-202ENST00000396578 EBAG9O00559 213 aa15.96■□□□□ 0.14
COL4A3-202ENST00000396578 HCLS1P14317 486 aaPredicted RBP15.96■□□□□ 0.14
COL4A3-202ENST00000396578 MAP7D1Q3KQU3 841 aa15.96■□□□□ 0.14
COL4A3-202ENST00000396578 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.14
COL4A3-202ENST00000396578 METAP2P50579 478 aaKnown RBP eCLIP15.96■□□□□ 0.14
COL4A3-202ENST00000396578 ANO6Q4KMQ2 910 aa15.96■□□□□ 0.14
COL4A3-202ENST00000396578 GTPBP4Q9BZE4 634 aaKnown RBP15.96■□□□□ 0.14
COL4A3-202ENST00000396578 NOLC1Q14978 699 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL4A3-202ENST00000396578 BICDL1Q6ZP65 573 aa15.95■□□□□ 0.14
COL4A3-202ENST00000396578 TTF1Q15361 905 aaPredicted RBP15.95■□□□□ 0.14
COL4A3-202ENST00000396578 PTPRCP08575 1304 aa15.95■□□□□ 0.14
COL4A3-202ENST00000396578 TBC1D9Q6ZT07 1266 aa15.95■□□□□ 0.14
COL4A3-202ENST00000396578 CCDC144CPQ8IYA2 1237 aa15.95■□□□□ 0.14
COL4A3-202ENST00000396578 TUBB4AP04350 444 aa15.95■□□□□ 0.14
COL4A3-202ENST00000396578 SKILP12757 684 aa15.95■□□□□ 0.14
COL4A3-202ENST00000396578 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
COL4A3-202ENST00000396578 WDR66Q8TBY9 1149 aa15.95■□□□□ 0.14
COL4A3-202ENST00000396578 PSMC4P43686 418 aa15.95■□□□□ 0.14
COL4A3-202ENST00000396578 IRX3P78415 501 aaPredicted RBP15.95■□□□□ 0.14
COL4A3-202ENST00000396578 MRPS9P82933 396 aaKnown RBP15.95■□□□□ 0.14
COL4A3-202ENST00000396578 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
COL4A3-202ENST00000396578 ATP2A1O14983 1001 aa15.94■□□□□ 0.14
COL4A3-202ENST00000396578 GIMAP6Q6P9H5 292 aa15.94■□□□□ 0.14
COL4A3-202ENST00000396578 MIS18AQ9NYP9 233 aa15.94■□□□□ 0.14
COL4A3-202ENST00000396578 DNAI1Q9UI46 699 aa15.94■□□□□ 0.14
COL4A3-202ENST00000396578 RPGRIP1LQ68CZ1 1315 aa15.94■□□□□ 0.14
COL4A3-202ENST00000396578 MYD88Q99836 296 aa15.94■□□□□ 0.14
COL4A3-202ENST00000396578 ARL1P40616 181 aaPredicted RBP15.94■□□□□ 0.14
COL4A3-202ENST00000396578 USP16Q9Y5T5 823 aa15.94■□□□□ 0.14
COL4A3-202ENST00000396578 SSH1Q8WYL5 1049 aa15.94■□□□□ 0.14
COL4A3-202ENST00000396578 KRT13P13646 458 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 STAT6P42226 847 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 LARP6Q9BRS8 491 aaKnown RBP15.93■□□□□ 0.14
COL4A3-202ENST00000396578 TMEM87AQ8NBN3 555 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 LRPPRCP42704 1394 aaKnown RBP15.93■□□□□ 0.14
COL4A3-202ENST00000396578 ZPR1O75312 459 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 TBCAO75347 108 aaKnown RBP15.93■□□□□ 0.14
COL4A3-202ENST00000396578 USP37Q86T82 979 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 SAMM50Q9Y512 469 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 TACC1O75410 805 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 PDE4BQ07343 736 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 CCDC63Q8NA47 563 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 RSRC1Q96IZ7 334 aaKnown RBP15.93■□□□□ 0.14
COL4A3-202ENST00000396578 CCDC8Q9H0W5 538 aaPredicted RBP15.93■□□□□ 0.14
COL4A3-202ENST00000396578 EFCAB5A4FU69 1503 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms