RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 PTCD1O75127 700 aaKnown RBP20.02■□□□□ 0.8
TRIM39-205ENST00000396551 RUFY2Q8WXA3 655 aa20.02■□□□□ 0.8
TRIM39-205ENST00000396551 PCDH11XQ9BZA7 1347 aa20.02■□□□□ 0.8
TRIM39-205ENST00000396551 PCDH11YQ9BZA8 1340 aa20.02■□□□□ 0.8
TRIM39-205ENST00000396551 NBPF26B4DH59 902 aa20.02■□□□□ 0.79
TRIM39-205ENST00000396551 NBPF14Q5TI25 921 aa20.02■□□□□ 0.79
TRIM39-205ENST00000396551 NBPF10Q6P3W6 841 aaKnown RBP20.02■□□□□ 0.79
TRIM39-205ENST00000396551 NBPF15Q8N660 670 aa20.02■□□□□ 0.79
TRIM39-205ENST00000396551 NUP188Q5SRE5 1749 aa20.01■□□□□ 0.79
TRIM39-205ENST00000396551 UBE3BQ7Z3V4 1068 aa20.01■□□□□ 0.79
TRIM39-205ENST00000396551 COL15A1P39059 1388 aa20.01■□□□□ 0.79
TRIM39-205ENST00000396551 COPRSQ9NQ92 184 aa20.01■□□□□ 0.79
TRIM39-205ENST00000396551 KCPQ6ZWJ8 1503 aa20.01■□□□□ 0.79
TRIM39-205ENST00000396551 CASP7P55210 303 aa20■□□□□ 0.79
TRIM39-205ENST00000396551 RABL6Q3YEC7 729 aaPredicted RBP20■□□□□ 0.79
TRIM39-205ENST00000396551 PLBD2Q8NHP8 589 aa20■□□□□ 0.79
TRIM39-205ENST00000396551 PTPN12Q05209 780 aaKnown RBP20■□□□□ 0.79
TRIM39-205ENST00000396551 SLAIN2Q9P270 581 aa20■□□□□ 0.79
TRIM39-205ENST00000396551 PRPF40AO75400 957 aaKnown RBP20■□□□□ 0.79
TRIM39-205ENST00000396551 FAM227BQ96M60 508 aa20■□□□□ 0.79
TRIM39-205ENST00000396551 AK2P54819 239 aa19.99■□□□□ 0.79
TRIM39-205ENST00000396551 BOLA2Q9H3K6 86 aa19.99■□□□□ 0.79
TRIM39-205ENST00000396551 ZNF335Q9H4Z2 1342 aaPredicted RBP19.99■□□□□ 0.79
TRIM39-205ENST00000396551 CPA1P15085 419 aa19.98■□□□□ 0.79
TRIM39-205ENST00000396551 NMIQ13287 307 aaPredicted RBP19.98■□□□□ 0.79
TRIM39-205ENST00000396551 KCNB2Q92953 911 aa19.98■□□□□ 0.79
TRIM39-205ENST00000396551 TJP1Q07157 1748 aa19.98■□□□□ 0.79
TRIM39-205ENST00000396551 A0A087WZG4 1122 aa19.98■□□□□ 0.79
TRIM39-205ENST00000396551 RUFY3Q7L099 469 aa19.98■□□□□ 0.79
TRIM39-205ENST00000396551 GPT2Q8TD30 523 aa19.98■□□□□ 0.79
TRIM39-205ENST00000396551 FAM43AQ8N2R8 423 aa19.98■□□□□ 0.79
TRIM39-205ENST00000396551 CCDC171Q6TFL3 1326 aa19.98■□□□□ 0.79
TRIM39-205ENST00000396551 NKX1-1Q15270 411 aaPredicted RBP19.97■□□□□ 0.79
TRIM39-205ENST00000396551 ADCK5Q3MIX3 580 aa19.97■□□□□ 0.79
TRIM39-205ENST00000396551 PRPF40BQ6NWY9 871 aaKnown RBP19.97■□□□□ 0.79
TRIM39-205ENST00000396551 ERVV-2B6SEH9 535 aa19.97■□□□□ 0.79
TRIM39-205ENST00000396551 NECTIN1Q15223 517 aa19.97■□□□□ 0.79
TRIM39-205ENST00000396551 TTLL7Q6ZT98 887 aa19.97■□□□□ 0.79
TRIM39-205ENST00000396551 LARP6Q9BRS8 491 aaKnown RBP19.97■□□□□ 0.79
TRIM39-205ENST00000396551 ERBB4Q15303 1308 aa19.97■□□□□ 0.79
TRIM39-205ENST00000396551 CAVIN1Q6NZI2 390 aaKnown RBP19.97■□□□□ 0.79
TRIM39-205ENST00000396551 TOGARAM1Q9Y4F4 1720 aa19.96■□□□□ 0.79
TRIM39-205ENST00000396551 CASTP20810 708 aaKnown RBP19.96■□□□□ 0.79
TRIM39-205ENST00000396551 CARD10Q9BWT7 1032 aa19.96■□□□□ 0.79
TRIM39-205ENST00000396551 SNRKQ9NRH2 765 aa19.96■□□□□ 0.79
TRIM39-205ENST00000396551 A0A0D9SFI3 127 aa19.96■□□□□ 0.79
TRIM39-205ENST00000396551 NCLP19338 710 aaKnown RBP19.96■□□□□ 0.79
TRIM39-205ENST00000396551 TFCP2Q12800 502 aa19.96■□□□□ 0.79
TRIM39-205ENST00000396551 DBNLQ9UJU6 430 aaKnown RBP19.96■□□□□ 0.79
TRIM39-205ENST00000396551 RPAP1Q9BWH6 1393 aaPredicted RBP19.95■□□□□ 0.78
TRIM39-205ENST00000396551 IL2RBP14784 551 aa19.95■□□□□ 0.78
TRIM39-205ENST00000396551 A1BGP04217 495 aa19.95■□□□□ 0.78
TRIM39-205ENST00000396551 TNNI3KQ59H18 835 aa19.95■□□□□ 0.78
TRIM39-205ENST00000396551 FPGT-TNNI3KV9GXZ4 949 aa19.95■□□□□ 0.78
TRIM39-205ENST00000396551 HIP1O00291 1037 aa19.95■□□□□ 0.78
TRIM39-205ENST00000396551 EDC3Q96F86 508 aaKnown RBP19.95■□□□□ 0.78
TRIM39-205ENST00000396551 RBM8AQ9Y5S9 174 aaKnown RBP19.95■□□□□ 0.78
TRIM39-205ENST00000396551 LARGE1O95461 756 aa19.94■□□□□ 0.78
TRIM39-205ENST00000396551 ZNF445P59923 1031 aa19.94■□□□□ 0.78
TRIM39-205ENST00000396551 JAKMIP1Q96N16 626 aaKnown RBP19.94■□□□□ 0.78
TRIM39-205ENST00000396551 FSD1Q9BTV5 496 aa19.94■□□□□ 0.78
TRIM39-205ENST00000396551 NSFL1CQ9UNZ2 370 aaKnown RBP19.94■□□□□ 0.78
TRIM39-205ENST00000396551 LIMCH1Q9UPQ0 1083 aa19.94■□□□□ 0.78
TRIM39-205ENST00000396551 FOXO4P98177 505 aa19.94■□□□□ 0.78
TRIM39-205ENST00000396551 ZSCAN23Q3MJ62 389 aa19.94■□□□□ 0.78
TRIM39-205ENST00000396551 DDX54Q8TDD1 881 aaKnown RBP19.94■□□□□ 0.78
TRIM39-205ENST00000396551 MAP4K1Q92918 833 aa19.94■□□□□ 0.78
TRIM39-205ENST00000396551 TNS2Q63HR2 1409 aa19.94■□□□□ 0.78
TRIM39-205ENST00000396551 MED23Q9ULK4 1368 aa19.94■□□□□ 0.78
TRIM39-205ENST00000396551 H7C1W4 665 aa19.93■□□□□ 0.78
TRIM39-205ENST00000396551 ZSWIM6Q9HCJ5 1215 aa19.93■□□□□ 0.78
TRIM39-205ENST00000396551 RBM27Q9P2N5 1060 aaKnown RBP19.93■□□□□ 0.78
TRIM39-205ENST00000396551 TM6SF1Q9BZW5 370 aa19.93■□□□□ 0.78
TRIM39-205ENST00000396551 STRN4Q9NRL3 753 aa19.93■□□□□ 0.78
TRIM39-205ENST00000396551 NHSL1Q5SYE7 1610 aa19.93■□□□□ 0.78
TRIM39-205ENST00000396551 CREB3L3Q68CJ9 461 aa19.93■□□□□ 0.78
TRIM39-205ENST00000396551 LMBR1LQ6UX01 489 aa19.93■□□□□ 0.78
TRIM39-205ENST00000396551 TCHHQ07283 1943 aa19.92■□□□□ 0.78
TRIM39-205ENST00000396551 RRAGDQ9NQL2 400 aaPredicted RBP19.92■□□□□ 0.78
TRIM39-205ENST00000396551 ATP5JP18859 108 aa19.92■□□□□ 0.78
TRIM39-205ENST00000396551 COL9A3Q14050 684 aaPredicted RBP19.91■□□□□ 0.78
TRIM39-205ENST00000396551 VPS53Q5VIR6 699 aa19.91■□□□□ 0.78
TRIM39-205ENST00000396551 JCADQ9P266 1359 aa19.91■□□□□ 0.78
TRIM39-205ENST00000396551 PDRG1Q9NUG6 133 aa19.91■□□□□ 0.78
TRIM39-205ENST00000396551 ZNF589Q86UQ0 364 aaPredicted RBP19.91■□□□□ 0.78
TRIM39-205ENST00000396551 DBNDD2Q9BQY9 259 aa19.91■□□□□ 0.78
TRIM39-205ENST00000396551 SLC27A2O14975 620 aa19.9■□□□□ 0.78
TRIM39-205ENST00000396551 NDUFB9Q9Y6M9 179 aa19.9■□□□□ 0.78
TRIM39-205ENST00000396551 WDR33Q9C0J8 1336 aaKnown RBP19.9■□□□□ 0.78
TRIM39-205ENST00000396551 CWC25Q9NXE8 425 aaPredicted RBP19.9■□□□□ 0.78
TRIM39-205ENST00000396551 TMEM63CQ9P1W3 806 aa19.9■□□□□ 0.78
TRIM39-205ENST00000396551 CYP46A1Q9Y6A2 500 aa19.9■□□□□ 0.78
TRIM39-205ENST00000396551 ZBTB3Q9H5J0 574 aa19.89■□□□□ 0.78
TRIM39-205ENST00000396551 TAF6LQ9Y6J9 622 aa19.89■□□□□ 0.77
TRIM39-205ENST00000396551 ST3GAL1Q11201 340 aa19.88■□□□□ 0.77
TRIM39-205ENST00000396551 KDM4FA0A1W2PPD8 638 aa19.88■□□□□ 0.77
TRIM39-205ENST00000396551 ZKSCAN1P17029 563 aaPredicted RBP19.88■□□□□ 0.77
TRIM39-205ENST00000396551 KCNJ4P48050 445 aa19.88■□□□□ 0.77
TRIM39-205ENST00000396551 FOXD4L6Q3SYB3 417 aaPredicted RBP19.88■□□□□ 0.77
TRIM39-205ENST00000396551 FOXD4L3Q6VB84 417 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms