RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 TWISTNBQ3B726 338 aaPredicted RBP24.85■■□□□ 1.57
CDKN1B-202ENST00000396340 SLC10A5Q5PT55 438 aa24.85■■□□□ 1.57
CDKN1B-202ENST00000396340 SUSD4Q5VX71 490 aa24.85■■□□□ 1.57
CDKN1B-202ENST00000396340 PRPF40BQ6NWY9 871 aaKnown RBP24.85■■□□□ 1.57
CDKN1B-202ENST00000396340 CCDC88AQ3V6T2 1871 aa24.85■■□□□ 1.57
CDKN1B-202ENST00000396340 DICER1Q9UPY3 1922 aaKnown RBP24.84■■□□□ 1.57
CDKN1B-202ENST00000396340 NTSR2O95665 410 aa24.84■■□□□ 1.57
CDKN1B-202ENST00000396340 TRIM28Q13263 835 aaKnown RBP24.84■■□□□ 1.57
CDKN1B-202ENST00000396340 RIC3Q7Z5B4 369 aa24.84■■□□□ 1.57
CDKN1B-202ENST00000396340 C8orf58Q8NAV2 365 aa24.84■■□□□ 1.57
CDKN1B-202ENST00000396340 SLX4Q8IY92 1834 aa24.84■■□□□ 1.57
CDKN1B-202ENST00000396340 ELL2O00472 640 aaPredicted RBP24.83■■□□□ 1.57
CDKN1B-202ENST00000396340 HOXA10P31260 410 aaPredicted RBP24.83■■□□□ 1.57
CDKN1B-202ENST00000396340 C9orf131Q5VYM1 1079 aa24.83■■□□□ 1.57
CDKN1B-202ENST00000396340 RTKN2Q8IZC4 609 aa24.83■■□□□ 1.57
CDKN1B-202ENST00000396340 CCDC24Q8N4L8 307 aa24.83■■□□□ 1.57
CDKN1B-202ENST00000396340 RBM17Q96I25 401 aaKnown RBP24.83■■□□□ 1.57
CDKN1B-202ENST00000396340 KDM2BQ8NHM5 1336 aa24.83■■□□□ 1.56
CDKN1B-202ENST00000396340 SH3TC1Q8TE82 1336 aa24.83■■□□□ 1.56
CDKN1B-202ENST00000396340 ERFEQ4G0M1 354 aa24.82■■□□□ 1.56
CDKN1B-202ENST00000396340 CCDC93Q567U6 631 aa24.82■■□□□ 1.56
CDKN1B-202ENST00000396340 NLRP10Q86W26 655 aa24.82■■□□□ 1.56
CDKN1B-202ENST00000396340 RNF181Q9P0P0 153 aa24.82■■□□□ 1.56
CDKN1B-202ENST00000396340 TRMT112Q9UI30 125 aaKnown RBP24.82■■□□□ 1.56
CDKN1B-202ENST00000396340 C21orf2O43822 256 aa24.81■■□□□ 1.56
CDKN1B-202ENST00000396340 NUTM1Q86Y26 1132 aa24.81■■□□□ 1.56
CDKN1B-202ENST00000396340 TSR2Q969E8 191 aaKnown RBP24.81■■□□□ 1.56
CDKN1B-202ENST00000396340 CRAMP1Q96RY5 1269 aa24.81■■□□□ 1.56
CDKN1B-202ENST00000396340 TAOK3Q9H2K8 898 aa24.81■■□□□ 1.56
CDKN1B-202ENST00000396340 FANCIQ9NVI1 1328 aa24.79■■□□□ 1.56
CDKN1B-202ENST00000396340 NEXNQ0ZGT2 675 aa24.78■■□□□ 1.56
CDKN1B-202ENST00000396340 ISCA1Q9BUE6 129 aa24.78■■□□□ 1.56
CDKN1B-202ENST00000396340 DPY19L2Q6NUT2 758 aa24.77■■□□□ 1.56
CDKN1B-202ENST00000396340 TMC4Q7Z404 712 aa24.77■■□□□ 1.56
CDKN1B-202ENST00000396340 CCDC191Q8NCU4 936 aa24.77■■□□□ 1.56
CDKN1B-202ENST00000396340 ABCC12Q96J65 1359 aa24.77■■□□□ 1.56
CDKN1B-202ENST00000396340 SALL2Q9Y467 1007 aaPredicted RBP24.76■■□□□ 1.55
CDKN1B-202ENST00000396340 TNRC6CQ9HCJ0 1690 aaKnown RBP24.75■■□□□ 1.55
CDKN1B-202ENST00000396340 KSR2Q6VAB6 950 aa24.75■■□□□ 1.55
CDKN1B-202ENST00000396340 TSPYL6Q8N831 410 aa24.75■■□□□ 1.55
CDKN1B-202ENST00000396340 C7orf43Q8WVR3 580 aa24.75■■□□□ 1.55
CDKN1B-202ENST00000396340 BBOX1O75936 387 aa24.74■■□□□ 1.55
CDKN1B-202ENST00000396340 SLC4A2P04920 1241 aa24.74■■□□□ 1.55
CDKN1B-202ENST00000396340 METTL22Q9BUU2 404 aaPredicted RBP24.74■■□□□ 1.55
CDKN1B-202ENST00000396340 TIAM2Q8IVF5 1701 aa24.73■■□□□ 1.55
CDKN1B-202ENST00000396340 NFKBIEO00221 500 aa24.73■■□□□ 1.55
CDKN1B-202ENST00000396340 FKBP4Q02790 459 aaKnown RBP eCLIP24.73■■□□□ 1.55
CDKN1B-202ENST00000396340 DDX46Q7L014 1031 aaKnown RBP24.73■■□□□ 1.55
CDKN1B-202ENST00000396340 ZBTB38Q8NAP3 1195 aaPredicted RBP24.73■■□□□ 1.55
CDKN1B-202ENST00000396340 ZNF428Q96B54 188 aa24.73■■□□□ 1.55
CDKN1B-202ENST00000396340 PHAXQ9H814 394 aaKnown RBP24.73■■□□□ 1.55
CDKN1B-202ENST00000396340 LAMB2P55268 1798 aa24.72■■□□□ 1.55
CDKN1B-202ENST00000396340 E9PSI1 815 aa24.72■■□□□ 1.55
CDKN1B-202ENST00000396340 C1QTNF8P60827 252 aa24.72■■□□□ 1.55
CDKN1B-202ENST00000396340 PSMD1Q99460 953 aa24.72■■□□□ 1.55
CDKN1B-202ENST00000396340 VPS33BQ9H267 617 aa24.72■■□□□ 1.55
CDKN1B-202ENST00000396340 RASSF7Q02833 373 aa24.71■■□□□ 1.55
CDKN1B-202ENST00000396340 CWC25Q9NXE8 425 aaPredicted RBP24.71■■□□□ 1.55
CDKN1B-202ENST00000396340 ZNF521Q96K83 1311 aa24.7■■□□□ 1.54
CDKN1B-202ENST00000396340 VAMP4O75379 141 aa24.7■■□□□ 1.54
CDKN1B-202ENST00000396340 ZNF219Q9P2Y4 722 aaPredicted RBP24.7■■□□□ 1.54
CDKN1B-202ENST00000396340 GLTPD2A6NH11 291 aa24.69■■□□□ 1.54
CDKN1B-202ENST00000396340 EXOSC9Q06265 439 aaKnown RBP24.69■■□□□ 1.54
CDKN1B-202ENST00000396340 C16orf71Q8IYS4 520 aaPredicted RBP24.69■■□□□ 1.54
CDKN1B-202ENST00000396340 SUPT20HQ8NEM7 779 aa24.69■■□□□ 1.54
CDKN1B-202ENST00000396340 ZNF526Q8TF50 670 aaPredicted RBP24.69■■□□□ 1.54
CDKN1B-202ENST00000396340 DDX60Q8IY21 1712 aaKnown RBP24.69■■□□□ 1.54
CDKN1B-202ENST00000396340 PI4KAP2A4QPH2 592 aa24.68■■□□□ 1.54
CDKN1B-202ENST00000396340 ATP5J2-PTCD1G3V325 749 aa24.68■■□□□ 1.54
CDKN1B-202ENST00000396340 PPEF1O14829 653 aaPredicted RBP24.68■■□□□ 1.54
CDKN1B-202ENST00000396340 PCCAP05165 728 aaPredicted RBP24.68■■□□□ 1.54
CDKN1B-202ENST00000396340 SF3B3Q15393 1217 aaKnown RBP24.68■■□□□ 1.54
CDKN1B-202ENST00000396340 DIEXFQ68CQ4 756 aaKnown RBP24.68■■□□□ 1.54
CDKN1B-202ENST00000396340 PI4KAP1Q8N8J0 262 aa24.68■■□□□ 1.54
CDKN1B-202ENST00000396340 MYD88Q99836 296 aa24.68■■□□□ 1.54
CDKN1B-202ENST00000396340 MAP3K2Q9Y2U5 619 aa24.68■■□□□ 1.54
CDKN1B-202ENST00000396340 FLIIQ13045 1269 aa24.67■■□□□ 1.54
CDKN1B-202ENST00000396340 IRS4O14654 1257 aaPredicted RBP24.66■■□□□ 1.54
CDKN1B-202ENST00000396340 TOMM70O94826 608 aa24.66■■□□□ 1.54
CDKN1B-202ENST00000396340 HCLS1P14317 486 aaPredicted RBP24.66■■□□□ 1.54
CDKN1B-202ENST00000396340 FKBP5Q13451 457 aaPredicted RBP24.66■■□□□ 1.54
CDKN1B-202ENST00000396340 JDP2Q8WYK2 163 aa24.66■■□□□ 1.54
CDKN1B-202ENST00000396340 FAM89AQ96GI7 184 aa24.66■■□□□ 1.54
CDKN1B-202ENST00000396340 ATP6V0A2Q9Y487 856 aa24.66■■□□□ 1.54
CDKN1B-202ENST00000396340 MYH3P11055 1940 aa24.66■■□□□ 1.54
CDKN1B-202ENST00000396340 GRAPQ13588 217 aa24.65■■□□□ 1.54
CDKN1B-202ENST00000396340 SP8Q8IXZ3 490 aa24.65■■□□□ 1.54
CDKN1B-202ENST00000396340 GRAPLQ8TC17 118 aaPredicted RBP24.65■■□□□ 1.54
CDKN1B-202ENST00000396340 ABCC4O15439 1325 aa24.63■■□□□ 1.53
CDKN1B-202ENST00000396340 CDHR2Q9BYE9 1310 aa24.63■■□□□ 1.53
CDKN1B-202ENST00000396340 SENP3-EIF4A1A0A087X0R7 540 aa24.63■■□□□ 1.53
CDKN1B-202ENST00000396340 PDE8AO60658 829 aa24.63■■□□□ 1.53
CDKN1B-202ENST00000396340 CT47B1P0C2W7 299 aaPredicted RBP24.63■■□□□ 1.53
CDKN1B-202ENST00000396340 VEGFAP15692 232 aaPredicted RBP24.63■■□□□ 1.53
CDKN1B-202ENST00000396340 IARSP41252 1262 aaKnown RBP24.63■■□□□ 1.53
CDKN1B-202ENST00000396340 CCDC152Q4G0S7 254 aa24.63■■□□□ 1.53
CDKN1B-202ENST00000396340 KIF3CO14782 793 aa24.61■■□□□ 1.53
CDKN1B-202ENST00000396340 SYNE4Q8N205 404 aa24.61■■□□□ 1.53
CDKN1B-202ENST00000396340 LINS1Q8NG48 757 aa24.61■■□□□ 1.53
CDKN1B-202ENST00000396340 DNAAF4Q8WXU2 420 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms