RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 POLA2Q14181 598 aa16.82■□□□□ 0.28
CCHCR1-203ENST00000396268 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
CCHCR1-203ENST00000396268 DDX54Q8TDD1 881 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-203ENST00000396268 LSG1Q9H089 658 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-203ENST00000396268 STX6O43752 255 aa16.82■□□□□ 0.28
CCHCR1-203ENST00000396268 ZSCAN22P10073 491 aaPredicted RBP16.82■□□□□ 0.28
CCHCR1-203ENST00000396268 SYT1P21579 422 aa16.82■□□□□ 0.28
CCHCR1-203ENST00000396268 DNAAF4Q8WXU2 420 aa16.82■□□□□ 0.28
CCHCR1-203ENST00000396268 LIMCH1Q9UPQ0 1083 aa16.82■□□□□ 0.28
CCHCR1-203ENST00000396268 TERF1P54274 439 aa16.81■□□□□ 0.28
CCHCR1-203ENST00000396268 KIAA2012Q0VF49 1180 aa16.81■□□□□ 0.28
CCHCR1-203ENST00000396268 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
CCHCR1-203ENST00000396268 SLC52A2Q9HAB3 445 aa16.81■□□□□ 0.28
CCHCR1-203ENST00000396268 BABAM1Q9NWV8 329 aa16.81■□□□□ 0.28
CCHCR1-203ENST00000396268 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-203ENST00000396268 RPAP1Q9BWH6 1393 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-203ENST00000396268 SPDYE4A6NLX3 237 aa16.81■□□□□ 0.28
CCHCR1-203ENST00000396268 EPB41L2O43491 1005 aaKnown RBP16.8■□□□□ 0.28
CCHCR1-203ENST00000396268 PIP4K2AP48426 406 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-203ENST00000396268 CCDC183Q5T5S1 534 aa16.8■□□□□ 0.28
CCHCR1-203ENST00000396268 IL17RAQ96F46 866 aa16.8■□□□□ 0.28
CCHCR1-203ENST00000396268 GIGYF1O75420 1035 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-203ENST00000396268 AEBP2Q6ZN18 517 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-203ENST00000396268 CCDC83Q8IWF9 413 aa16.8■□□□□ 0.28
CCHCR1-203ENST00000396268 TTC14Q96N46 770 aa16.8■□□□□ 0.28
CCHCR1-203ENST00000396268 HCLS1P14317 486 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-203ENST00000396268 OVOS2A0A0G2JMS6 1433 aa16.8■□□□□ 0.28
CCHCR1-203ENST00000396268 NUTM2BA6NNL0 878 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 NUTM2EB1AL46 878 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 NUTM2AQ8IVF1 878 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 HSP90AB4PQ58FF6 505 aa16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 BEND3Q5T5X7 828 aa16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 ZNF790Q6PG37 636 aa16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 CLASRPQ8N2M8 674 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 FAM184AQ8NB25 1140 aa16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 JAKMIP1Q96N16 626 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 CARD10Q9BWT7 1032 aa16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 SIPA1L3O60292 1781 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-203ENST00000396268 ABCC6O95255 1503 aa16.78■□□□□ 0.28
CCHCR1-203ENST00000396268 GLRX3O76003 335 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-203ENST00000396268 PRPF40BQ6NWY9 871 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-203ENST00000396268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCHCR1-203ENST00000396268 SCN11AQ9UI33 1791 aa16.78■□□□□ 0.28
CCHCR1-203ENST00000396268 LARGE1O95461 756 aa16.78■□□□□ 0.28
CCHCR1-203ENST00000396268 F13A1P00488 732 aa16.78■□□□□ 0.28
CCHCR1-203ENST00000396268 IL2RBP14784 551 aa16.78■□□□□ 0.28
CCHCR1-203ENST00000396268 ZNF496Q96IT1 587 aaPredicted RBP16.78■□□□□ 0.28
CCHCR1-203ENST00000396268 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
CCHCR1-203ENST00000396268 TCHHQ07283 1943 aa16.78■□□□□ 0.28
CCHCR1-203ENST00000396268 PXDNLA1KZ92 1463 aa16.77■□□□□ 0.28
CCHCR1-203ENST00000396268 UBE2HP62256 183 aa16.77■□□□□ 0.28
CCHCR1-203ENST00000396268 C9orf78Q9NZ63 289 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-203ENST00000396268 GJB2P29033 226 aa16.77■□□□□ 0.28
CCHCR1-203ENST00000396268 KCNJ4P48050 445 aa16.77■□□□□ 0.28
CCHCR1-203ENST00000396268 PTH1RQ03431 593 aa16.77■□□□□ 0.28
CCHCR1-203ENST00000396268 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.28
CCHCR1-203ENST00000396268 DCAF5Q96JK2 942 aa16.77■□□□□ 0.28
CCHCR1-203ENST00000396268 ADAMTS7Q9UKP4 1686 aa16.77■□□□□ 0.27
CCHCR1-203ENST00000396268 TUBGCP6Q96RT7 1819 aa16.77■□□□□ 0.27
CCHCR1-203ENST00000396268 VPS37CA5D8V6 355 aaPredicted RBP16.77■□□□□ 0.27
CCHCR1-203ENST00000396268 ADCY5O95622 1261 aa16.77■□□□□ 0.27
CCHCR1-203ENST00000396268 PDRG1Q9NUG6 133 aa16.77■□□□□ 0.27
CCHCR1-203ENST00000396268 PA2G4Q9UQ80 394 aaKnown RBP16.77■□□□□ 0.27
CCHCR1-203ENST00000396268 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-203ENST00000396268 ADCK5Q3MIX3 580 aa16.76■□□□□ 0.27
CCHCR1-203ENST00000396268 TMEM87AQ8NBN3 555 aa16.76■□□□□ 0.27
CCHCR1-203ENST00000396268 PKD1L3Q7Z443 1732 aa16.76■□□□□ 0.27
CCHCR1-203ENST00000396268 DNM1Q05193 864 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-203ENST00000396268 PPP4R3BQ5MIZ7 849 aa16.76■□□□□ 0.27
CCHCR1-203ENST00000396268 GIMAP6Q6P9H5 292 aa16.76■□□□□ 0.27
CCHCR1-203ENST00000396268 ZNF710Q8N1W2 664 aa16.76■□□□□ 0.27
CCHCR1-203ENST00000396268 SMAP1Q8IYB5 467 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-203ENST00000396268 CCDC94Q9BW85 323 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-203ENST00000396268 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
CCHCR1-203ENST00000396268 AHDC1Q5TGY3 1603 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-203ENST00000396268 HEG1Q9ULI3 1381 aa16.75■□□□□ 0.27
CCHCR1-203ENST00000396268 CABP4P57796 275 aa16.75■□□□□ 0.27
CCHCR1-203ENST00000396268 NOLC1Q14978 699 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCHCR1-203ENST00000396268 UVSSAQ2YD98 709 aa16.75■□□□□ 0.27
CCHCR1-203ENST00000396268 SPC24Q8NBT2 197 aa16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 ECHDC1Q9NTX5 307 aa16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 USP16Q9Y5T5 823 aa16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 CYP46A1Q9Y6A2 500 aa16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 UBAP1LF5GYI3 381 aa16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 LETM1O95202 739 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 ATP2B3Q16720 1220 aa16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 GPATCH3Q96I76 525 aa16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 TTC41PQ6P2S7 1318 aa16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 AIMP1Q12904 312 aaKnown RBP16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 NECAB1Q8N987 351 aa16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 MAP3K2Q9Y2U5 619 aa16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 CHMP3Q9Y3E7 222 aa16.74■□□□□ 0.27
CCHCR1-203ENST00000396268 PHLPP1O60346 1717 aa16.73■□□□□ 0.27
CCHCR1-203ENST00000396268 MYL6BP14649 208 aa16.73■□□□□ 0.27
CCHCR1-203ENST00000396268 AACSQ86V21 672 aa16.73■□□□□ 0.27
CCHCR1-203ENST00000396268 ZKSCAN1P17029 563 aaPredicted RBP16.73■□□□□ 0.27
CCHCR1-203ENST00000396268 CWF19L2Q2TBE0 894 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-203ENST00000396268 MYRIPQ8NFW9 859 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms