RNA–Protein interactions for RNA: ENST00000396076.5

LDHB-203, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LDHB, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-203ENST00000396076 PCCAP05165 728 aaPredicted RBP29.2■■■□□ 2.27
LDHB-203ENST00000396076 UBN2Q6ZU65 1347 aa29.2■■■□□ 2.26
LDHB-203ENST00000396076 SRGAP3O43295 1099 aa29.2■■■□□ 2.26
LDHB-203ENST00000396076 ADRA2BP18089 450 aa29.2■■■□□ 2.26
LDHB-203ENST00000396076 EPHA10Q5JZY3 1008 aa29.2■■■□□ 2.26
LDHB-203ENST00000396076 PELP1Q8IZL8 1130 aaKnown RBP29.2■■■□□ 2.26
LDHB-203ENST00000396076 ZBTB38Q8NAP3 1195 aaPredicted RBP29.2■■■□□ 2.26
LDHB-203ENST00000396076 NUP98P52948 1817 aa29.19■■■□□ 2.26
LDHB-203ENST00000396076 ZPR1O75312 459 aa29.19■■■□□ 2.26
LDHB-203ENST00000396076 RTL5Q5HYW3 569 aaPredicted RBP29.19■■■□□ 2.26
LDHB-203ENST00000396076 SKAP1Q86WV1 359 aa29.19■■■□□ 2.26
LDHB-203ENST00000396076 PHF14O94880 888 aa29.18■■■□□ 2.26
LDHB-203ENST00000396076 USPL1Q5W0Q7 1092 aa29.18■■■□□ 2.26
LDHB-203ENST00000396076 BCL2L12Q9HB09 334 aa29.18■■■□□ 2.26
LDHB-203ENST00000396076 SRP68Q9UHB9 627 aaKnown RBP29.18■■■□□ 2.26
LDHB-203ENST00000396076 RFC4P35249 363 aa29.17■■■□□ 2.26
LDHB-203ENST00000396076 NUCB1Q02818 461 aa29.17■■■□□ 2.26
LDHB-203ENST00000396076 PARP10Q53GL7 1025 aa29.17■■■□□ 2.26
LDHB-203ENST00000396076 NIP7Q9Y221 180 aaKnown RBP eCLIP29.17■■■□□ 2.26
LDHB-203ENST00000396076 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.16■■■□□ 2.26
LDHB-203ENST00000396076 SSFA2P28290 1259 aa29.16■■■□□ 2.26
LDHB-203ENST00000396076 RABL6Q3YEC7 729 aaPredicted RBP29.16■■■□□ 2.26
LDHB-203ENST00000396076 FAM89AQ96GI7 184 aa29.16■■■□□ 2.26
LDHB-203ENST00000396076 TRMT112Q9UI30 125 aaKnown RBP29.16■■■□□ 2.26
LDHB-203ENST00000396076 ANKRD36CQ5JPF3 1778 aa29.16■■■□□ 2.26
LDHB-203ENST00000396076 FOXO4P98177 505 aa29.15■■■□□ 2.26
LDHB-203ENST00000396076 USP42Q9H9J4 1324 aaKnown RBP29.15■■■□□ 2.26
LDHB-203ENST00000396076 ANKRD45Q5TZF3 282 aa29.15■■■□□ 2.26
LDHB-203ENST00000396076 SUSD4Q5VX71 490 aa29.15■■■□□ 2.26
LDHB-203ENST00000396076 CAMKK2Q96RR4 588 aa29.15■■■□□ 2.26
LDHB-203ENST00000396076 BCORQ6W2J9 1755 aa29.14■■■□□ 2.26
LDHB-203ENST00000396076 AKT1S1Q96B36 256 aa29.14■■■□□ 2.25
LDHB-203ENST00000396076 CDHR2Q9BYE9 1310 aa29.13■■■□□ 2.25
LDHB-203ENST00000396076 EN1Q05925 392 aaPredicted RBP29.13■■■□□ 2.25
LDHB-203ENST00000396076 CHD1LQ86WJ1 897 aa29.13■■■□□ 2.25
LDHB-203ENST00000396076 UTP14AQ9BVJ6 771 aaKnown RBP29.13■■■□□ 2.25
LDHB-203ENST00000396076 PLA2G12BQ9BX93 195 aa29.13■■■□□ 2.25
LDHB-203ENST00000396076 RGPD3A6NKT7 1758 aaPredicted RBP29.12■■■□□ 2.25
LDHB-203ENST00000396076 RGPD4Q7Z3J3 1758 aa29.12■■■□□ 2.25
LDHB-203ENST00000396076 SF3B2Q13435 895 aaKnown RBP29.12■■■□□ 2.25
LDHB-203ENST00000396076 EZH2Q15910 746 aaKnown RBP29.11■■■□□ 2.25
LDHB-203ENST00000396076 ZNF827Q17R98 1081 aa29.11■■■□□ 2.25
LDHB-203ENST00000396076 TBC1D9BQ66K14 1250 aa29.11■■■□□ 2.25
LDHB-203ENST00000396076 LMBR1LQ6UX01 489 aa29.11■■■□□ 2.25
LDHB-203ENST00000396076 SYNE4Q8N205 404 aa29.11■■■□□ 2.25
LDHB-203ENST00000396076 EXOC6BQ9Y2D4 811 aa29.11■■■□□ 2.25
LDHB-203ENST00000396076 SCN7AQ01118 1682 aa29.11■■■□□ 2.25
LDHB-203ENST00000396076 UBR3Q6ZT12 1888 aa29.1■■■□□ 2.25
LDHB-203ENST00000396076 SURF6O75683 361 aaKnown RBP29.1■■■□□ 2.25
LDHB-203ENST00000396076 TFCP2L1Q9NZI6 479 aa29.1■■■□□ 2.25
LDHB-203ENST00000396076 IRS4O14654 1257 aaPredicted RBP29.09■■■□□ 2.25
LDHB-203ENST00000396076 RGS3P49796 1198 aa29.09■■■□□ 2.25
LDHB-203ENST00000396076 LNPKQ9C0E8 428 aa29.09■■■□□ 2.25
LDHB-203ENST00000396076 NOP58Q9Y2X3 529 aaKnown RBP29.09■■■□□ 2.25
LDHB-203ENST00000396076 SH3TC1Q8TE82 1336 aa29.08■■■□□ 2.25
LDHB-203ENST00000396076 FAM177BA6PVY3 158 aa29.08■■■□□ 2.25
LDHB-203ENST00000396076 NTSR2O95665 410 aa29.08■■■□□ 2.25
LDHB-203ENST00000396076 BAG6P46379 1132 aa29.08■■■□□ 2.25
LDHB-203ENST00000396076 BICDL1Q6ZP65 573 aa29.08■■■□□ 2.25
LDHB-203ENST00000396076 SETDB2Q96T68 719 aa29.07■■■□□ 2.24
LDHB-203ENST00000396076 APBB1O00213 710 aa29.06■■■□□ 2.24
LDHB-203ENST00000396076 RAB11FIP3O75154 756 aa29.06■■■□□ 2.24
LDHB-203ENST00000396076 PDE4AP27815 886 aa29.06■■■□□ 2.24
LDHB-203ENST00000396076 ZBTB47Q9UFB7 747 aaPredicted RBP29.06■■■□□ 2.24
LDHB-203ENST00000396076 C4AP0C0L4 1744 aa29.06■■■□□ 2.24
LDHB-203ENST00000396076 RFX5P48382 616 aaPredicted RBP29.05■■■□□ 2.24
LDHB-203ENST00000396076 HSP90AB4PQ58FF6 505 aa29.05■■■□□ 2.24
LDHB-203ENST00000396076 PA2G4Q9UQ80 394 aaKnown RBP29.05■■■□□ 2.24
LDHB-203ENST00000396076 PDE8AO60658 829 aa29.04■■■□□ 2.24
LDHB-203ENST00000396076 CSF1RP07333 972 aa29.04■■■□□ 2.24
LDHB-203ENST00000396076 CHMP3Q9Y3E7 222 aa29.04■■■□□ 2.24
LDHB-203ENST00000396076 FLAD1Q8NFF5 587 aa29.04■■■□□ 2.24
LDHB-203ENST00000396076 LRRCC1Q9C099 1032 aa29.04■■■□□ 2.24
LDHB-203ENST00000396076 SMARCA5O60264 1052 aaPredicted RBP29.03■■■□□ 2.24
LDHB-203ENST00000396076 GYS1P13807 737 aa29.03■■■□□ 2.24
LDHB-203ENST00000396076 DEFB132Q7Z7B7 95 aa29.03■■■□□ 2.24
LDHB-203ENST00000396076 CCDC125Q86Z20 511 aa29.03■■■□□ 2.24
LDHB-203ENST00000396076 COPRSQ9NQ92 184 aa29.03■■■□□ 2.24
LDHB-203ENST00000396076 HSP90B1P14625 803 aaKnown RBP29.01■■■□□ 2.23
LDHB-203ENST00000396076 CTSWP56202 376 aa29.01■■■□□ 2.23
LDHB-203ENST00000396076 PTPN12Q05209 780 aaKnown RBP29.01■■■□□ 2.23
LDHB-203ENST00000396076 NUTM1Q86Y26 1132 aa29.01■■■□□ 2.23
LDHB-203ENST00000396076 TTLL11Q8NHH1 800 aa29.01■■■□□ 2.23
LDHB-203ENST00000396076 HCLS1P14317 486 aaPredicted RBP29■■■□□ 2.23
LDHB-203ENST00000396076 NFIXQ14938 502 aa29■■■□□ 2.23
LDHB-203ENST00000396076 COL23A1Q86Y22 540 aaPredicted RBP29■■■□□ 2.23
LDHB-203ENST00000396076 KLHDC4Q8TBB5 520 aa29■■■□□ 2.23
LDHB-203ENST00000396076 NYXQ9GZU5 481 aa29■■■□□ 2.23
LDHB-203ENST00000396076 G3BP1Q13283 466 aaKnown RBP eCLIP28.99■■■□□ 2.23
LDHB-203ENST00000396076 OS9Q13438 667 aaPredicted RBP28.99■■■□□ 2.23
LDHB-203ENST00000396076 RHPN1Q8TCX5 695 aa28.99■■■□□ 2.23
LDHB-203ENST00000396076 KIF1BPQ96EK5 621 aa28.99■■■□□ 2.23
LDHB-203ENST00000396076 NBPF5PQ86XG9 351 aaPredicted RBP28.99■■■□□ 2.23
LDHB-203ENST00000396076 SLC15A2Q16348 729 aa28.98■■■□□ 2.23
LDHB-203ENST00000396076 ERFEQ4G0M1 354 aa28.98■■■□□ 2.23
LDHB-203ENST00000396076 ERC1Q8IUD2 1116 aa28.98■■■□□ 2.23
LDHB-203ENST00000396076 ANO8Q9HCE9 1232 aaPredicted RBP28.98■■■□□ 2.23
LDHB-203ENST00000396076 PNPLA7Q6ZV29 1317 aa28.97■■■□□ 2.23
LDHB-203ENST00000396076 CCDC57Q2TAC2 916 aa28.97■■■□□ 2.23
LDHB-203ENST00000396076 FAM161AQ3B820 660 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms