RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 ZBTB47Q9UFB7 747 aaPredicted RBP16.6■□□□□ 0.25
CLIC1-209ENST00000395892 PA2G4Q9UQ80 394 aaKnown RBP16.6■□□□□ 0.25
CLIC1-209ENST00000395892 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
CLIC1-209ENST00000395892 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
CLIC1-209ENST00000395892 KIF1BPQ96EK5 621 aa16.59■□□□□ 0.25
CLIC1-209ENST00000395892 QTRT2Q9H974 415 aaKnown RBP16.59■□□□□ 0.25
CLIC1-209ENST00000395892 CCDC87Q9NVE4 849 aa16.59■□□□□ 0.25
CLIC1-209ENST00000395892 CRKLP46109 303 aaKnown RBP16.58■□□□□ 0.24
CLIC1-209ENST00000395892 KIF6Q6ZMV9 814 aa16.58■□□□□ 0.24
CLIC1-209ENST00000395892 COPRSQ9NQ92 184 aa16.58■□□□□ 0.24
CLIC1-209ENST00000395892 SASH1O94885 1247 aa16.57■□□□□ 0.24
CLIC1-209ENST00000395892 FAM182BQ5T319 152 aa16.57■□□□□ 0.24
CLIC1-209ENST00000395892 NPM2Q86SE8 214 aaKnown RBP16.57■□□□□ 0.24
CLIC1-209ENST00000395892 SEPT12Q8IYM1 358 aa16.57■□□□□ 0.24
CLIC1-209ENST00000395892 IL1RAPL2Q9NP60 686 aa16.57■□□□□ 0.24
CLIC1-209ENST00000395892 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.57■□□□□ 0.24
CLIC1-209ENST00000395892 NUP98P52948 1817 aa16.56■□□□□ 0.24
CLIC1-209ENST00000395892 TUBGCP6Q96RT7 1819 aa16.56■□□□□ 0.24
CLIC1-209ENST00000395892 COL5A3P25940 1745 aaPredicted RBP16.56■□□□□ 0.24
CLIC1-209ENST00000395892 NHSQ6T4R5 1651 aa16.56■□□□□ 0.24
CLIC1-209ENST00000395892 A0A0G2JS52 829 aa16.56■□□□□ 0.24
CLIC1-209ENST00000395892 SDSP20132 328 aa16.56■□□□□ 0.24
CLIC1-209ENST00000395892 PTPN12Q05209 780 aaKnown RBP16.56■□□□□ 0.24
CLIC1-209ENST00000395892 ZNF34Q8IZ26 560 aa16.56■□□□□ 0.24
CLIC1-209ENST00000395892 IPO9Q96P70 1041 aaKnown RBP16.56■□□□□ 0.24
CLIC1-209ENST00000395892 ZNF330Q9Y3S2 320 aaPredicted RBP16.56■□□□□ 0.24
CLIC1-209ENST00000395892 SBF2Q86WG5 1849 aa16.56■□□□□ 0.24
CLIC1-209ENST00000395892 AOX1Q06278 1338 aa16.55■□□□□ 0.24
CLIC1-209ENST00000395892 USP42Q9H9J4 1324 aaKnown RBP16.55■□□□□ 0.24
CLIC1-209ENST00000395892 BTAF1O14981 1849 aa16.55■□□□□ 0.24
CLIC1-209ENST00000395892 PCCAP05165 728 aaPredicted RBP16.55■□□□□ 0.24
CLIC1-209ENST00000395892 MX1P20591 662 aa16.55■□□□□ 0.24
CLIC1-209ENST00000395892 ANP32AP39687 249 aaKnown RBP16.55■□□□□ 0.24
CLIC1-209ENST00000395892 TBC1D9Q6ZT07 1266 aa16.55■□□□□ 0.24
CLIC1-209ENST00000395892 NLRP10Q86W26 655 aa16.55■□□□□ 0.24
CLIC1-209ENST00000395892 DZIP3Q86Y13 1208 aaKnown RBP16.55■□□□□ 0.24
CLIC1-209ENST00000395892 LINC00116Q8NCU8 138 aa16.55■□□□□ 0.24
CLIC1-209ENST00000395892 PLA2G12BQ9BX93 195 aa16.55■□□□□ 0.24
CLIC1-209ENST00000395892 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
CLIC1-209ENST00000395892 MYT1Q01538 1121 aa16.54■□□□□ 0.24
CLIC1-209ENST00000395892 HSP90AB3PQ58FF7 597 aa16.54■□□□□ 0.24
CLIC1-209ENST00000395892 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
CLIC1-209ENST00000395892 NUTM1Q86Y26 1132 aa16.54■□□□□ 0.24
CLIC1-209ENST00000395892 ERC1Q8IUD2 1116 aa16.54■□□□□ 0.24
CLIC1-209ENST00000395892 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
CLIC1-209ENST00000395892 TBC1D32Q96NH3 1257 aa16.54■□□□□ 0.24
CLIC1-209ENST00000395892 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
CLIC1-209ENST00000395892 CDC45O75419 566 aa16.53■□□□□ 0.24
CLIC1-209ENST00000395892 CSF1RP07333 972 aa16.53■□□□□ 0.24
CLIC1-209ENST00000395892 G3BP1Q13283 466 aaKnown RBP eCLIP16.53■□□□□ 0.247e-10■□□□□ 10.8
CLIC1-209ENST00000395892 ZBTB38Q8NAP3 1195 aaPredicted RBP16.53■□□□□ 0.24
CLIC1-209ENST00000395892 PI4K2BQ8TCG2 481 aa16.53■□□□□ 0.24
CLIC1-209ENST00000395892 ANKRD36CQ5JPF3 1778 aa16.53■□□□□ 0.24
CLIC1-209ENST00000395892 CAMTA2O94983 1202 aa16.52■□□□□ 0.24
CLIC1-209ENST00000395892 RTL5Q5HYW3 569 aaPredicted RBP16.52■□□□□ 0.24
CLIC1-209ENST00000395892 TSHZ3Q63HK5 1081 aa16.52■□□□□ 0.24
CLIC1-209ENST00000395892 CDHR2Q9BYE9 1310 aa16.51■□□□□ 0.23
CLIC1-209ENST00000395892 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
CLIC1-209ENST00000395892 KCNQ4P56696 695 aa16.51■□□□□ 0.23
CLIC1-209ENST00000395892 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
CLIC1-209ENST00000395892 SYNE4Q8N205 404 aa16.51■□□□□ 0.23
CLIC1-209ENST00000395892 EAF2Q96CJ1 260 aaPredicted RBP16.51■□□□□ 0.23
CLIC1-209ENST00000395892 ARXQ96QS3 562 aa16.51■□□□□ 0.23
CLIC1-209ENST00000395892 GPTP24298 496 aa16.5■□□□□ 0.23
CLIC1-209ENST00000395892 OS9Q13438 667 aaPredicted RBP16.5■□□□□ 0.23
CLIC1-209ENST00000395892 FAM89AQ96GI7 184 aa16.5■□□□□ 0.23
CLIC1-209ENST00000395892 UBN2Q6ZU65 1347 aa16.49■□□□□ 0.23
CLIC1-209ENST00000395892 LY75O60449 1722 aa16.49■□□□□ 0.23
CLIC1-209ENST00000395892 MFAP1P55081 439 aaKnown RBP16.49■□□□□ 0.23
CLIC1-209ENST00000395892 ATG9AQ7Z3C6 839 aa16.49■□□□□ 0.23
CLIC1-209ENST00000395892 CLASRPQ8N2M8 674 aaKnown RBP16.49■□□□□ 0.23
CLIC1-209ENST00000395892 BCL11BQ9C0K0 894 aaPredicted RBP16.49■□□□□ 0.23
CLIC1-209ENST00000395892 SIL1Q9H173 461 aa16.49■□□□□ 0.23
CLIC1-209ENST00000395892 BRWD3Q6RI45 1802 aa16.49■□□□□ 0.23
CLIC1-209ENST00000395892 TTC41PQ6P2S7 1318 aa16.48■□□□□ 0.23
CLIC1-209ENST00000395892 C22orf23Q9BZE7 217 aa16.48■□□□□ 0.23
CLIC1-209ENST00000395892 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
CLIC1-209ENST00000395892 RBM25P49756 843 aaKnown RBP16.47■□□□□ 0.23
CLIC1-209ENST00000395892 SUSD4Q5VX71 490 aa16.47■□□□□ 0.23
CLIC1-209ENST00000395892 RGL2O15211 777 aa16.46■□□□□ 0.23
CLIC1-209ENST00000395892 TFCP2Q12800 502 aa16.46■□□□□ 0.23
CLIC1-209ENST00000395892 AACSQ86V21 672 aa16.46■□□□□ 0.23
CLIC1-209ENST00000395892 TTLL11Q8NHH1 800 aa16.46■□□□□ 0.23
CLIC1-209ENST00000395892 DDRGK1Q96HY6 314 aa16.46■□□□□ 0.23
CLIC1-209ENST00000395892 ECHDC1Q9NTX5 307 aa16.46■□□□□ 0.23
CLIC1-209ENST00000395892 TAF1LQ8IZX4 1826 aa16.45■□□□□ 0.22
CLIC1-209ENST00000395892 CIAO1O76071 339 aa16.45■□□□□ 0.22
CLIC1-209ENST00000395892 CLEC4GQ6UXB4 293 aa16.45■□□□□ 0.22
CLIC1-209ENST00000395892 SMIM5Q71RC9 77 aa16.45■□□□□ 0.22
CLIC1-209ENST00000395892 KRT27Q7Z3Y8 459 aa16.45■□□□□ 0.22
CLIC1-209ENST00000395892 ZNF594Q96JF6 807 aaPredicted RBP16.45■□□□□ 0.22
CLIC1-209ENST00000395892 CCDC8Q9H0W5 538 aaPredicted RBP16.45■□□□□ 0.22
CLIC1-209ENST00000395892 UPF2Q9HAU5 1272 aaKnown RBP16.45■□□□□ 0.22
CLIC1-209ENST00000395892 BCL2L12Q9HB09 334 aa16.45■□□□□ 0.22
CLIC1-209ENST00000395892 TRMT112Q9UI30 125 aaKnown RBP16.45■□□□□ 0.22
CLIC1-209ENST00000395892 CCNL1Q9UK58 526 aaPredicted RBP16.45■□□□□ 0.22
CLIC1-209ENST00000395892 BCORQ6W2J9 1755 aa16.44■□□□□ 0.22
CLIC1-209ENST00000395892 EYA2O00167 538 aa16.44■□□□□ 0.22
CLIC1-209ENST00000395892 IRS4O14654 1257 aaPredicted RBP16.44■□□□□ 0.22
CLIC1-209ENST00000395892 IFIT2P09913 472 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms