RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 CCDC83Q8IWF9 413 aa11.09□□□□□ -0.63
CDRT1-203ENST00000395667 JARID2Q92833 1246 aaPredicted RBP11.09□□□□□ -0.63
CDRT1-203ENST00000395667 RBM8AQ9Y5S9 174 aaKnown RBP11.09□□□□□ -0.63
CDRT1-203ENST00000395667 USP16Q9Y5T5 823 aa11.09□□□□□ -0.63
CDRT1-203ENST00000395667 RPAP1Q9BWH6 1393 aaPredicted RBP11.09□□□□□ -0.63
CDRT1-203ENST00000395667 STX6O43752 255 aa11.09□□□□□ -0.63
CDRT1-203ENST00000395667 ZSCAN22P10073 491 aaPredicted RBP11.09□□□□□ -0.63
CDRT1-203ENST00000395667 VPS53Q5VIR6 699 aa11.09□□□□□ -0.63
CDRT1-203ENST00000395667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDRT1-203ENST00000395667 CRYBG1Q9Y4K1 1723 aa11.09□□□□□ -0.63
CDRT1-203ENST00000395667 TCHHQ07283 1943 aa11.09□□□□□ -0.63
CDRT1-203ENST00000395667 GADD45BO75293 160 aaPredicted RBP11.09□□□□□ -0.63
CDRT1-203ENST00000395667 SYT1P21579 422 aa11.09□□□□□ -0.63
CDRT1-203ENST00000395667 RNF214Q8ND24 703 aa11.09□□□□□ -0.63
CDRT1-203ENST00000395667 DCAF5Q96JK2 942 aa11.09□□□□□ -0.63
CDRT1-203ENST00000395667 FMNL2Q96PY5 1086 aa11.09□□□□□ -0.63
CDRT1-203ENST00000395667 MEGF6O75095 1541 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 PHF14O94880 888 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 LARGE1O95461 756 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 EPHA10Q5JZY3 1008 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 CREB3L3Q68CJ9 461 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 TM6SF1Q9BZW5 370 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 MSNP26038 577 aaKnown RBP11.08□□□□□ -0.64
CDRT1-203ENST00000395667 CABP4P57796 275 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 NECTIN1Q15223 517 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 ZSCAN30Q86W11 494 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 ZSCAN31Q96LW9 406 aaPredicted RBP11.08□□□□□ -0.64
CDRT1-203ENST00000395667 CNPY2Q9Y2B0 182 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 ATP6V1DQ9Y5K8 247 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 LMTK3Q96Q04 1460 aa11.08□□□□□ -0.64
CDRT1-203ENST00000395667 CYP27B1O15528 508 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 GJB2P29033 226 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 UBE3BQ7Z3V4 1068 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 TSPY26PQ9H489 355 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 SH2B1Q9NRF2 756 aaPredicted RBP11.07□□□□□ -0.64
CDRT1-203ENST00000395667 SCN11AQ9UI33 1791 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 ADAMTS7Q9UKP4 1686 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 A0A0D9SFI3 127 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 ATP5J2-PTCD1G3V325 749 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 DTNBO60941 627 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 PTCD1O75127 700 aaKnown RBP11.07□□□□□ -0.64
CDRT1-203ENST00000395667 RNF20Q5VTR2 975 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 C5P01031 1676 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 ALS2Q96Q42 1657 aa11.07□□□□□ -0.64
CDRT1-203ENST00000395667 F13A1P00488 732 aa11.06□□□□□ -0.64
CDRT1-203ENST00000395667 PSMA5P28066 241 aa11.06□□□□□ -0.64
CDRT1-203ENST00000395667 MAP4K1Q92918 833 aa11.06□□□□□ -0.64
CDRT1-203ENST00000395667 MST1RQ04912 1400 aa11.06□□□□□ -0.64
CDRT1-203ENST00000395667 FIBPO43427 364 aa11.06□□□□□ -0.64
CDRT1-203ENST00000395667 KCNB2Q92953 911 aa11.06□□□□□ -0.64
CDRT1-203ENST00000395667 A0A087WZG4 1122 aa11.06□□□□□ -0.64
CDRT1-203ENST00000395667 VPS37CA5D8V6 355 aaPredicted RBP11.06□□□□□ -0.64
CDRT1-203ENST00000395667 SLC27A2O14975 620 aa11.06□□□□□ -0.64
CDRT1-203ENST00000395667 NECAB1Q8N987 351 aa11.06□□□□□ -0.64
CDRT1-203ENST00000395667 TFCP2Q12800 502 aa11.05□□□□□ -0.64
CDRT1-203ENST00000395667 EDC3Q96F86 508 aaKnown RBP11.05□□□□□ -0.64
CDRT1-203ENST00000395667 COPRSQ9NQ92 184 aa11.05□□□□□ -0.64
CDRT1-203ENST00000395667 CHMP3Q9Y3E7 222 aa11.05□□□□□ -0.64
CDRT1-203ENST00000395667 ME3Q16798 604 aa11.05□□□□□ -0.64
CDRT1-203ENST00000395667 BLOC1S2Q6QNY1 142 aa11.05□□□□□ -0.64
CDRT1-203ENST00000395667 CADPS2Q86UW7 1296 aa11.05□□□□□ -0.64
CDRT1-203ENST00000395667 TMEM87AQ8NBN3 555 aa11.05□□□□□ -0.64
CDRT1-203ENST00000395667 PDLIM2Q96JY6 352 aa11.05□□□□□ -0.64
CDRT1-203ENST00000395667 TNNI3KQ59H18 835 aa11.04□□□□□ -0.64
CDRT1-203ENST00000395667 FPGT-TNNI3KV9GXZ4 949 aa11.04□□□□□ -0.64
CDRT1-203ENST00000395667 UBE2HP62256 183 aa11.04□□□□□ -0.64
CDRT1-203ENST00000395667 PTPN12Q05209 780 aaKnown RBP11.04□□□□□ -0.64
CDRT1-203ENST00000395667 LRP10Q7Z4F1 713 aa11.04□□□□□ -0.64
CDRT1-203ENST00000395667 TCEANC2Q96MN5 208 aa11.04□□□□□ -0.64
CDRT1-203ENST00000395667 DNAJC2Q99543 621 aaKnown RBP11.04□□□□□ -0.64
CDRT1-203ENST00000395667 DBNLQ9UJU6 430 aaKnown RBP11.04□□□□□ -0.64
CDRT1-203ENST00000395667 CCDC9Q9Y3X0 531 aaKnown RBP11.04□□□□□ -0.64
CDRT1-203ENST00000395667 CSPP1Q1MSJ5 1256 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 HS1BP3Q53T59 392 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 CCDC183Q5T5S1 534 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 TNS3Q68CZ2 1445 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 ZNF589Q86UQ0 364 aaPredicted RBP11.03□□□□□ -0.64
CDRT1-203ENST00000395667 TPCN1Q9ULQ1 816 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 MTMR6Q9Y217 621 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 DNM1Q05193 864 aaKnown RBP11.03□□□□□ -0.64
CDRT1-203ENST00000395667 ANKRD1Q15327 319 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 PLBD2Q8NHP8 589 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 NDUFB9Q9Y6M9 179 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 ATP5JP18859 108 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 RFX5P48382 616 aaPredicted RBP11.03□□□□□ -0.64
CDRT1-203ENST00000395667 LARP1BQ659C4 914 aaKnown RBP11.03□□□□□ -0.64
CDRT1-203ENST00000395667 SNRKQ9NRH2 765 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
CDRT1-203ENST00000395667 RABL6Q3YEC7 729 aaPredicted RBP11.02□□□□□ -0.65
CDRT1-203ENST00000395667 LMBR1LQ6UX01 489 aa11.02□□□□□ -0.65
CDRT1-203ENST00000395667 HMG20BQ9P0W2 317 aa11.02□□□□□ -0.65
CDRT1-203ENST00000395667 PTMAP06454 111 aaKnown RBP11.02□□□□□ -0.65
CDRT1-203ENST00000395667 RPS6KB1P23443 525 aa11.02□□□□□ -0.65
CDRT1-203ENST00000395667 ST3GAL1Q11201 340 aa11.02□□□□□ -0.65
CDRT1-203ENST00000395667 DBNDD2Q9BQY9 259 aa11.02□□□□□ -0.65
CDRT1-203ENST00000395667 AFDNP55196 1824 aaKnown RBP11.02□□□□□ -0.65
CDRT1-203ENST00000395667 SPATA31A3Q5VYP0 1347 aa11.02□□□□□ -0.65
CDRT1-203ENST00000395667 TOM1L2Q6ZVM7 507 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms