RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 PTPN12Q05209 780 aaKnown RBP16.79■□□□□ 0.28
SNCAIP-204ENST00000395466 UBE3BQ7Z3V4 1068 aa16.79■□□□□ 0.28
SNCAIP-204ENST00000395466 RUFY2Q8WXA3 655 aa16.79■□□□□ 0.28
SNCAIP-204ENST00000395466 ATP5J2-PTCD1G3V325 749 aa16.78■□□□□ 0.28
SNCAIP-204ENST00000395466 PTCD1O75127 700 aaKnown RBP16.78■□□□□ 0.28
SNCAIP-204ENST00000395466 PTH1RQ03431 593 aa16.78■□□□□ 0.28
SNCAIP-204ENST00000395466 KIAA1211Q6ZU35 1233 aa16.78■□□□□ 0.28
SNCAIP-204ENST00000395466 KCNB2Q92953 911 aa16.78■□□□□ 0.28
SNCAIP-204ENST00000395466 LMBRD1Q9NUN5 540 aa16.78■□□□□ 0.28
SNCAIP-204ENST00000395466 KLHL40Q2TBA0 621 aa16.78■□□□□ 0.28
SNCAIP-204ENST00000395466 MCTP1Q6DN14 999 aa16.78■□□□□ 0.28
SNCAIP-204ENST00000395466 SNRKQ9NRH2 765 aa16.78■□□□□ 0.28
SNCAIP-204ENST00000395466 ISY1Q9ULR0 285 aaKnown RBP16.78■□□□□ 0.28
SNCAIP-204ENST00000395466 A0A087WZG4 1122 aa16.77■□□□□ 0.27
SNCAIP-204ENST00000395466 TTLL7Q6ZT98 887 aa16.77■□□□□ 0.27
SNCAIP-204ENST00000395466 NOL8Q76FK4 1167 aaKnown RBP16.77■□□□□ 0.27
SNCAIP-204ENST00000395466 BRD1O95696 1058 aa16.76■□□□□ 0.27
SNCAIP-204ENST00000395466 H7C1W4 665 aa16.76■□□□□ 0.27
SNCAIP-204ENST00000395466 GAS2L3Q86XJ1 694 aa16.76■□□□□ 0.27
SNCAIP-204ENST00000395466 CCDC171Q6TFL3 1326 aa16.75■□□□□ 0.27
SNCAIP-204ENST00000395466 A1BGP04217 495 aa16.75■□□□□ 0.27
SNCAIP-204ENST00000395466 MRE11P49959 708 aa16.75■□□□□ 0.27
SNCAIP-204ENST00000395466 FOXO4P98177 505 aa16.75■□□□□ 0.27
SNCAIP-204ENST00000395466 NMIQ13287 307 aaPredicted RBP16.75■□□□□ 0.27
SNCAIP-204ENST00000395466 BOLA2Q9H3K6 86 aa16.75■□□□□ 0.27
SNCAIP-204ENST00000395466 STRN4Q9NRL3 753 aa16.75■□□□□ 0.27
SNCAIP-204ENST00000395466 HIP1O00291 1037 aa16.74■□□□□ 0.27
SNCAIP-204ENST00000395466 NECTIN1Q15223 517 aa16.74■□□□□ 0.27
SNCAIP-204ENST00000395466 DDX54Q8TDD1 881 aaKnown RBP16.74■□□□□ 0.27
SNCAIP-204ENST00000395466 FAM227BQ96M60 508 aa16.74■□□□□ 0.27
SNCAIP-204ENST00000395466 ARXQ96QS3 562 aa16.74■□□□□ 0.27
SNCAIP-204ENST00000395466 PANK2Q9BZ23 570 aa16.74■□□□□ 0.27
SNCAIP-204ENST00000395466 DBNLQ9UJU6 430 aaKnown RBP16.74■□□□□ 0.27
SNCAIP-204ENST00000395466 ITGB4P16144 1822 aa16.74■□□□□ 0.27
SNCAIP-204ENST00000395466 TFCP2Q12800 502 aa16.73■□□□□ 0.27
SNCAIP-204ENST00000395466 TNNI3KQ59H18 835 aa16.73■□□□□ 0.27
SNCAIP-204ENST00000395466 GRPEL1Q9HAV7 217 aa16.73■□□□□ 0.27
SNCAIP-204ENST00000395466 DDX49Q9Y6V7 483 aaKnown RBP16.73■□□□□ 0.27
SNCAIP-204ENST00000395466 FPGT-TNNI3KV9GXZ4 949 aa16.73■□□□□ 0.27
SNCAIP-204ENST00000395466 JCADQ9P266 1359 aa16.73■□□□□ 0.27
SNCAIP-204ENST00000395466 MED23Q9ULK4 1368 aa16.73■□□□□ 0.27
SNCAIP-204ENST00000395466 AK2P54819 239 aa16.73■□□□□ 0.27
SNCAIP-204ENST00000395466 RUFY3Q7L099 469 aa16.73■□□□□ 0.27
SNCAIP-204ENST00000395466 CHAMP1Q96JM3 812 aa16.73■□□□□ 0.27
SNCAIP-204ENST00000395466 TCHHQ07283 1943 aa16.72■□□□□ 0.27
SNCAIP-204ENST00000395466 A0A0D9SFI3 127 aa16.72■□□□□ 0.27
SNCAIP-204ENST00000395466 ATP5JP18859 108 aa16.72■□□□□ 0.27
SNCAIP-204ENST00000395466 LMBR1LQ6UX01 489 aa16.72■□□□□ 0.27
SNCAIP-204ENST00000395466 MAP4K1Q92918 833 aa16.72■□□□□ 0.27
SNCAIP-204ENST00000395466 TM6SF1Q9BZW5 370 aa16.72■□□□□ 0.27
SNCAIP-204ENST00000395466 EVA1CP58658 441 aa16.71■□□□□ 0.27
SNCAIP-204ENST00000395466 ADCK5Q3MIX3 580 aa16.71■□□□□ 0.27
SNCAIP-204ENST00000395466 PRPF40BQ6NWY9 871 aaKnown RBP16.71■□□□□ 0.27
SNCAIP-204ENST00000395466 ZSWIM6Q9HCJ5 1215 aa16.71■□□□□ 0.27
SNCAIP-204ENST00000395466 CWC25Q9NXE8 425 aaPredicted RBP16.71■□□□□ 0.27
SNCAIP-204ENST00000395466 RTN4Q9NQC3 1192 aaKnown RBP16.71■□□□□ 0.27
SNCAIP-204ENST00000395466 RBM8AQ9Y5S9 174 aaKnown RBP16.71■□□□□ 0.27
SNCAIP-204ENST00000395466 RPAP1Q9BWH6 1393 aaPredicted RBP16.7■□□□□ 0.26
SNCAIP-204ENST00000395466 CPA1P15085 419 aa16.7■□□□□ 0.26
SNCAIP-204ENST00000395466 CASTP20810 708 aaKnown RBP16.7■□□□□ 0.26
SNCAIP-204ENST00000395466 FOXD4L5Q5VV16 416 aaPredicted RBP16.7■□□□□ 0.26
SNCAIP-204ENST00000395466 CCDC191Q8NCU4 936 aa16.7■□□□□ 0.26
SNCAIP-204ENST00000395466 FOXD4L4Q8WXT5 416 aaPredicted RBP16.7■□□□□ 0.26
SNCAIP-204ENST00000395466 FSD1Q9BTV5 496 aa16.7■□□□□ 0.26
SNCAIP-204ENST00000395466 LIMCH1Q9UPQ0 1083 aa16.7■□□□□ 0.26
SNCAIP-204ENST00000395466 PRPF40AO75400 957 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-204ENST00000395466 VPS53Q5VIR6 699 aa16.69■□□□□ 0.26
SNCAIP-204ENST00000395466 CREB3L3Q68CJ9 461 aa16.69■□□□□ 0.26
SNCAIP-204ENST00000395466 GPT2Q8TD30 523 aa16.69■□□□□ 0.26
SNCAIP-204ENST00000395466 EDC3Q96F86 508 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-204ENST00000395466 DISP2A7MBM2 1401 aa16.69■□□□□ 0.26
SNCAIP-204ENST00000395466 ATG9AQ7Z3C6 839 aa16.69■□□□□ 0.26
SNCAIP-204ENST00000395466 JAKMIP1Q96N16 626 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-204ENST00000395466 DBNDD2Q9BQY9 259 aa16.69■□□□□ 0.26
SNCAIP-204ENST00000395466 ZBTB3Q9H5J0 574 aa16.69■□□□□ 0.26
SNCAIP-204ENST00000395466 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-204ENST00000395466 RFX7Q2KHR2 1363 aa16.68■□□□□ 0.26
SNCAIP-204ENST00000395466 COL14A1Q05707 1796 aaKnown RBP16.68■□□□□ 0.26
SNCAIP-204ENST00000395466 LARGE1O95461 756 aa16.68■□□□□ 0.26
SNCAIP-204ENST00000395466 ISCA1Q9BUE6 129 aa16.68■□□□□ 0.26
SNCAIP-204ENST00000395466 SLC27A2O14975 620 aa16.67■□□□□ 0.26
SNCAIP-204ENST00000395466 ZNF445P59923 1031 aa16.67■□□□□ 0.26
SNCAIP-204ENST00000395466 ZNF589Q86UQ0 364 aaPredicted RBP16.67■□□□□ 0.26
SNCAIP-204ENST00000395466 LARP6Q9BRS8 491 aaKnown RBP16.67■□□□□ 0.26
SNCAIP-204ENST00000395466 TMOD3Q9NYL9 352 aa16.67■□□□□ 0.26
SNCAIP-204ENST00000395466 PLCH1Q4KWH8 1693 aa16.67■□□□□ 0.26
SNCAIP-204ENST00000395466 HAUS7Q99871 368 aa16.67■□□□□ 0.26
SNCAIP-204ENST00000395466 PDRG1Q9NUG6 133 aa16.67■□□□□ 0.26
SNCAIP-204ENST00000395466 CYP46A1Q9Y6A2 500 aa16.67■□□□□ 0.26
SNCAIP-204ENST00000395466 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
SNCAIP-204ENST00000395466 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
SNCAIP-204ENST00000395466 PIGBQ92521 554 aa16.66■□□□□ 0.26
SNCAIP-204ENST00000395466 GPR108Q9NPR9 543 aa16.66■□□□□ 0.26
SNCAIP-204ENST00000395466 WDR33Q9C0J8 1336 aaKnown RBP16.66■□□□□ 0.26
SNCAIP-204ENST00000395466 COL16A1Q07092 1604 aaPredicted RBP16.66■□□□□ 0.26
SNCAIP-204ENST00000395466 TAF5LO75529 589 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 ST3GAL1Q11201 340 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 BTG4Q9NY30 223 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
SNCAIP-204ENST00000395466 WNK3Q9BYP7 1800 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms