RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 MRC1P22897 1456 aa18.8■□□□□ 0.6
RAPGEF3-203ENST00000395360 ERVV-2B6SEH9 535 aa18.8■□□□□ 0.6
RAPGEF3-203ENST00000395360 XAGE3Q8WTP9 111 aa18.8■□□□□ 0.6
RAPGEF3-203ENST00000395360 USP42Q9H9J4 1324 aaKnown RBP18.8■□□□□ 0.6
RAPGEF3-203ENST00000395360 SGSM2O43147 1006 aa18.8■□□□□ 0.6
RAPGEF3-203ENST00000395360 GLRX3O76003 335 aaKnown RBP18.8■□□□□ 0.6
RAPGEF3-203ENST00000395360 MCM2P49736 904 aa18.8■□□□□ 0.6
RAPGEF3-203ENST00000395360 COPS6Q7L5N1 327 aa18.8■□□□□ 0.6
RAPGEF3-203ENST00000395360 KRT27Q7Z3Y8 459 aa18.8■□□□□ 0.6
RAPGEF3-203ENST00000395360 ERC1Q8IUD2 1116 aa18.8■□□□□ 0.6
RAPGEF3-203ENST00000395360 NEXNQ0ZGT2 675 aa18.79■□□□□ 0.6
RAPGEF3-203ENST00000395360 USP16Q9Y5T5 823 aa18.79■□□□□ 0.6
RAPGEF3-203ENST00000395360 EPB41L2O43491 1005 aaKnown RBP18.79■□□□□ 0.6
RAPGEF3-203ENST00000395360 HSPA4P34932 840 aa18.79■□□□□ 0.6
RAPGEF3-203ENST00000395360 UPF3BQ9BZI7 483 aaKnown RBP18.79■□□□□ 0.6
RAPGEF3-203ENST00000395360 BRWD3Q6RI45 1802 aa18.78■□□□□ 0.6
RAPGEF3-203ENST00000395360 SNRPA1P09661 255 aaKnown RBP18.78■□□□□ 0.6
RAPGEF3-203ENST00000395360 IFIT2P09913 472 aaKnown RBP18.78■□□□□ 0.6
RAPGEF3-203ENST00000395360 PIP4K2AP48426 406 aaPredicted RBP18.78■□□□□ 0.6
RAPGEF3-203ENST00000395360 CWC27Q6UX04 472 aaKnown RBP18.78■□□□□ 0.6
RAPGEF3-203ENST00000395360 NOL8Q76FK4 1167 aaKnown RBP18.78■□□□□ 0.6
RAPGEF3-203ENST00000395360 NEURL1BA8MQ27 555 aa18.78■□□□□ 0.6
RAPGEF3-203ENST00000395360 IL17RAQ96F46 866 aa18.78■□□□□ 0.6
RAPGEF3-203ENST00000395360 ECHDC1Q9NTX5 307 aa18.78■□□□□ 0.6
RAPGEF3-203ENST00000395360 MCTP1Q6DN14 999 aa18.77■□□□□ 0.6
RAPGEF3-203ENST00000395360 AACSQ86V21 672 aa18.77■□□□□ 0.6
RAPGEF3-203ENST00000395360 MYD88Q99836 296 aa18.77■□□□□ 0.6
RAPGEF3-203ENST00000395360 RAD50Q92878 1312 aa18.77■□□□□ 0.6
RAPGEF3-203ENST00000395360 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.59
RAPGEF3-203ENST00000395360 CABP4P57796 275 aa18.77■□□□□ 0.59
RAPGEF3-203ENST00000395360 G3BP1Q13283 466 aaKnown RBP eCLIP18.76■□□□□ 0.59
RAPGEF3-203ENST00000395360 ANKRD13DQ6ZTN6 518 aa18.76■□□□□ 0.59
RAPGEF3-203ENST00000395360 GPATCH3Q96I76 525 aa18.76■□□□□ 0.59
RAPGEF3-203ENST00000395360 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
RAPGEF3-203ENST00000395360 METTL22Q9BUU2 404 aaPredicted RBP18.76■□□□□ 0.59
RAPGEF3-203ENST00000395360 ZDHHC9Q9Y397 364 aa18.76■□□□□ 0.59
RAPGEF3-203ENST00000395360 SASH1O94885 1247 aa18.75■□□□□ 0.59
RAPGEF3-203ENST00000395360 GCKRQ14397 625 aa18.75■□□□□ 0.59
RAPGEF3-203ENST00000395360 PANK2Q9BZ23 570 aa18.75■□□□□ 0.59
RAPGEF3-203ENST00000395360 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.75■□□□□ 0.59
RAPGEF3-203ENST00000395360 DDX49Q9Y6V7 483 aaKnown RBP18.75■□□□□ 0.59
RAPGEF3-203ENST00000395360 MRE11P49959 708 aa18.75■□□□□ 0.59
RAPGEF3-203ENST00000395360 LRP10Q7Z4F1 713 aa18.75■□□□□ 0.59
RAPGEF3-203ENST00000395360 LSG1Q9H089 658 aaKnown RBP18.75■□□□□ 0.59
RAPGEF3-203ENST00000395360 SIL1Q9H173 461 aa18.75■□□□□ 0.59
RAPGEF3-203ENST00000395360 DOT1LQ8TEK3 1739 aa18.75■□□□□ 0.59
RAPGEF3-203ENST00000395360 CUL4AQ13619 759 aa18.74■□□□□ 0.59
RAPGEF3-203ENST00000395360 FAM196AQ6ZSG2 479 aa18.74■□□□□ 0.59
RAPGEF3-203ENST00000395360 KIAA1211Q6ZU35 1233 aa18.74■□□□□ 0.59
RAPGEF3-203ENST00000395360 UBE2Q2Q8WVN8 375 aa18.74■□□□□ 0.59
RAPGEF3-203ENST00000395360 DIAPH3Q9NSV4 1193 aa18.74■□□□□ 0.59
RAPGEF3-203ENST00000395360 KLHL40Q2TBA0 621 aa18.74■□□□□ 0.59
RAPGEF3-203ENST00000395360 KLHDC4Q8TBB5 520 aa18.74■□□□□ 0.59
RAPGEF3-203ENST00000395360 EAF2Q96CJ1 260 aaPredicted RBP18.73■□□□□ 0.59
RAPGEF3-203ENST00000395360 GRPEL1Q9HAV7 217 aa18.73■□□□□ 0.59
RAPGEF3-203ENST00000395360 ISY1Q9ULR0 285 aaKnown RBP18.73■□□□□ 0.59
RAPGEF3-203ENST00000395360 CCDC8Q9H0W5 538 aaPredicted RBP18.73■□□□□ 0.59
RAPGEF3-203ENST00000395360 TMOD3Q9NYL9 352 aa18.73■□□□□ 0.59
RAPGEF3-203ENST00000395360 EPHA10Q5JZY3 1008 aa18.72■□□□□ 0.59
RAPGEF3-203ENST00000395360 SNX14Q9Y5W7 946 aa18.72■□□□□ 0.59
RAPGEF3-203ENST00000395360 GAS2L3Q86XJ1 694 aa18.72■□□□□ 0.59
RAPGEF3-203ENST00000395360 JARID2Q92833 1246 aaPredicted RBP18.72■□□□□ 0.59
RAPGEF3-203ENST00000395360 INTS4Q96HW7 963 aaKnown RBP18.72■□□□□ 0.59
RAPGEF3-203ENST00000395360 ITGB4P16144 1822 aa18.71■□□□□ 0.59
RAPGEF3-203ENST00000395360 FOXD4L5Q5VV16 416 aaPredicted RBP18.71■□□□□ 0.59
RAPGEF3-203ENST00000395360 RASEFQ8IZ41 740 aa18.71■□□□□ 0.59
RAPGEF3-203ENST00000395360 RUFY2Q8WXA3 655 aa18.71■□□□□ 0.59
RAPGEF3-203ENST00000395360 FOXD4L4Q8WXT5 416 aaPredicted RBP18.71■□□□□ 0.59
RAPGEF3-203ENST00000395360 EVI5LQ96CN4 794 aa18.71■□□□□ 0.59
RAPGEF3-203ENST00000395360 LMBRD1Q9NUN5 540 aa18.71■□□□□ 0.59
RAPGEF3-203ENST00000395360 NHSQ6T4R5 1651 aa18.71■□□□□ 0.59
RAPGEF3-203ENST00000395360 PRIM1P49642 420 aaKnown RBP18.71■□□□□ 0.58
RAPGEF3-203ENST00000395360 TLR7Q9NYK1 1049 aaKnown RBP18.71■□□□□ 0.58
RAPGEF3-203ENST00000395360 ATP5J2-PTCD1G3V325 749 aa18.69■□□□□ 0.58
RAPGEF3-203ENST00000395360 PTCD1O75127 700 aaKnown RBP18.69■□□□□ 0.58
RAPGEF3-203ENST00000395360 FAM182BQ5T319 152 aa18.69■□□□□ 0.58
RAPGEF3-203ENST00000395360 UBE3BQ7Z3V4 1068 aa18.69■□□□□ 0.58
RAPGEF3-203ENST00000395360 PIGBQ92521 554 aa18.69■□□□□ 0.58
RAPGEF3-203ENST00000395360 SYTL4Q96C24 671 aaPredicted RBP18.69■□□□□ 0.58
RAPGEF3-203ENST00000395360 ACSBG1Q96GR2 724 aa18.69■□□□□ 0.58
RAPGEF3-203ENST00000395360 CHAMP1Q96JM3 812 aa18.69■□□□□ 0.58
RAPGEF3-203ENST00000395360 SBF2Q86WG5 1849 aa18.68■□□□□ 0.58
RAPGEF3-203ENST00000395360 PRPF40AO75400 957 aaKnown RBP18.68■□□□□ 0.58
RAPGEF3-203ENST00000395360 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
RAPGEF3-203ENST00000395360 PTH1RQ03431 593 aa18.68■□□□□ 0.58
RAPGEF3-203ENST00000395360 PAPPAQ13219 1627 aa18.67■□□□□ 0.58
RAPGEF3-203ENST00000395360 BRD1O95696 1058 aa18.67■□□□□ 0.58
RAPGEF3-203ENST00000395360 BOLA2Q9H3K6 86 aa18.67■□□□□ 0.58
RAPGEF3-203ENST00000395360 TTC14Q96N46 770 aa18.67■□□□□ 0.58
RAPGEF3-203ENST00000395360 BCL11BQ9C0K0 894 aaPredicted RBP18.67■□□□□ 0.58
RAPGEF3-203ENST00000395360 KAT6BQ8WYB5 2073 aa18.66■□□□□ 0.58
RAPGEF3-203ENST00000395360 A0A087WZG4 1122 aa18.66■□□□□ 0.58
RAPGEF3-203ENST00000395360 AK2P54819 239 aa18.66■□□□□ 0.58
RAPGEF3-203ENST00000395360 CAVIN1Q6NZI2 390 aaKnown RBP18.66■□□□□ 0.58
RAPGEF3-203ENST00000395360 PLBD2Q8NHP8 589 aa18.66■□□□□ 0.58
RAPGEF3-203ENST00000395360 COPRSQ9NQ92 184 aa18.66■□□□□ 0.58
RAPGEF3-203ENST00000395360 AFDNP55196 1824 aaKnown RBP18.65■□□□□ 0.58
RAPGEF3-203ENST00000395360 KCNQ2O43526 872 aa18.65■□□□□ 0.58
RAPGEF3-203ENST00000395360 CASTP20810 708 aaKnown RBP18.65■□□□□ 0.58
RAPGEF3-203ENST00000395360 FAM227BQ96M60 508 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms