RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 SMARCA5O60264 1052 aaPredicted RBP16.33■□□□□ 0.2
VPS26A-203ENST00000395098 FAM89AQ96GI7 184 aa16.33■□□□□ 0.2
VPS26A-203ENST00000395098 NUP98P52948 1817 aa16.33■□□□□ 0.2
VPS26A-203ENST00000395098 APBA3O96018 575 aa16.33■□□□□ 0.2
VPS26A-203ENST00000395098 FOXO4P98177 505 aa16.33■□□□□ 0.2
VPS26A-203ENST00000395098 TXNRD1Q16881 649 aa16.33■□□□□ 0.2
VPS26A-203ENST00000395098 BCL11AQ9H165 835 aa16.33■□□□□ 0.2
VPS26A-203ENST00000395098 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
VPS26A-203ENST00000395098 RTCBQ9Y3I0 505 aaKnown RBP16.32■□□□□ 0.2
VPS26A-203ENST00000395098 RABL6Q3YEC7 729 aaPredicted RBP16.32■□□□□ 0.2
VPS26A-203ENST00000395098 SRP68Q9UHB9 627 aaKnown RBP16.32■□□□□ 0.2
VPS26A-203ENST00000395098 PA2G4Q9UQ80 394 aaKnown RBP16.32■□□□□ 0.2
VPS26A-203ENST00000395098 SURF6O75683 361 aaKnown RBP16.31■□□□□ 0.2
VPS26A-203ENST00000395098 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
VPS26A-203ENST00000395098 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
VPS26A-203ENST00000395098 ZBTB38Q8NAP3 1195 aaPredicted RBP16.31■□□□□ 0.2
VPS26A-203ENST00000395098 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
VPS26A-203ENST00000395098 BCL2L12Q9HB09 334 aa16.31■□□□□ 0.2
VPS26A-203ENST00000395098 PLSCR1O15162 318 aa16.31■□□□□ 0.2
VPS26A-203ENST00000395098 AK7Q96M32 723 aa16.31■□□□□ 0.2
VPS26A-203ENST00000395098 ANKRD36CQ5JPF3 1778 aa16.3■□□□□ 0.2
VPS26A-203ENST00000395098 PHF14O94880 888 aa16.3■□□□□ 0.2
VPS26A-203ENST00000395098 ILDR1Q86SU0 546 aaPredicted RBP16.3■□□□□ 0.2
VPS26A-203ENST00000395098 KLHDC4Q8TBB5 520 aa16.3■□□□□ 0.2
VPS26A-203ENST00000395098 SUSD4Q5VX71 490 aa16.3■□□□□ 0.2
VPS26A-203ENST00000395098 USPL1Q5W0Q7 1092 aa16.3■□□□□ 0.2
VPS26A-203ENST00000395098 LMBR1LQ6UX01 489 aa16.3■□□□□ 0.2
VPS26A-203ENST00000395098 TSHZ2Q9NRE2 1034 aa16.3■□□□□ 0.2
VPS26A-203ENST00000395098 OTUD7AQ8TE49 926 aaPredicted RBP16.29■□□□□ 0.2
VPS26A-203ENST00000395098 NARFQ9UHQ1 456 aa16.29■□□□□ 0.2
VPS26A-203ENST00000395098 TRMT112Q9UI30 125 aaKnown RBP16.29■□□□□ 0.2
VPS26A-203ENST00000395098 BCORQ6W2J9 1755 aa16.29■□□□□ 0.2
VPS26A-203ENST00000395098 FAM177BA6PVY3 158 aa16.29■□□□□ 0.2
VPS26A-203ENST00000395098 RFX5P48382 616 aaPredicted RBP16.29■□□□□ 0.2
VPS26A-203ENST00000395098 NIP7Q9Y221 180 aaKnown RBP eCLIP16.29■□□□□ 0.2
VPS26A-203ENST00000395098 NOP58Q9Y2X3 529 aaKnown RBP16.28■□□□□ 0.2
VPS26A-203ENST00000395098 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
VPS26A-203ENST00000395098 TNS1Q9HBL0 1735 aaKnown RBP16.28■□□□□ 0.2
VPS26A-203ENST00000395098 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.2
VPS26A-203ENST00000395098 LRRCC1Q9C099 1032 aa16.27■□□□□ 0.2
VPS26A-203ENST00000395098 ZNF652Q9Y2D9 606 aa16.27■□□□□ 0.2
VPS26A-203ENST00000395098 CDHR2Q9BYE9 1310 aa16.27■□□□□ 0.19
VPS26A-203ENST00000395098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.27■□□□□ 0.19
VPS26A-203ENST00000395098 TBC1D9BQ66K14 1250 aa16.27■□□□□ 0.19
VPS26A-203ENST00000395098 SCN7AQ01118 1682 aa16.26■□□□□ 0.19
VPS26A-203ENST00000395098 PLA2G12BQ9BX93 195 aa16.26■□□□□ 0.19
VPS26A-203ENST00000395098 IL1RAPL2Q9NP60 686 aa16.26■□□□□ 0.19
VPS26A-203ENST00000395098 ZPR1O75312 459 aa16.26■□□□□ 0.19
VPS26A-203ENST00000395098 PTPN12Q05209 780 aaKnown RBP16.26■□□□□ 0.19
VPS26A-203ENST00000395098 BICDL1Q6ZP65 573 aa16.26■□□□□ 0.19
VPS26A-203ENST00000395098 PLEKHM2Q8IWE5 1019 aa16.26■□□□□ 0.19
VPS26A-203ENST00000395098 RHPN1Q8TCX5 695 aa16.26■□□□□ 0.19
VPS26A-203ENST00000395098 SIL1Q9H173 461 aa16.26■□□□□ 0.19
VPS26A-203ENST00000395098 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
VPS26A-203ENST00000395098 USP42Q9H9J4 1324 aaKnown RBP16.25■□□□□ 0.19
VPS26A-203ENST00000395098 IRS4O14654 1257 aaPredicted RBP16.25■□□□□ 0.19
VPS26A-203ENST00000395098 NTSR2O95665 410 aa16.25■□□□□ 0.19
VPS26A-203ENST00000395098 ZNF827Q17R98 1081 aa16.25■□□□□ 0.19
VPS26A-203ENST00000395098 PARP10Q53GL7 1025 aa16.25■□□□□ 0.19
VPS26A-203ENST00000395098 CCDC85AQ96PX6 553 aaPredicted RBP16.25■□□□□ 0.19
VPS26A-203ENST00000395098 UTP14AQ9BVJ6 771 aaKnown RBP16.25■□□□□ 0.19
VPS26A-203ENST00000395098 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.25■□□□□ 0.19
VPS26A-203ENST00000395098 RAB11FIP3O75154 756 aa16.25■□□□□ 0.19
VPS26A-203ENST00000395098 RFC4P35249 363 aa16.25■□□□□ 0.19
VPS26A-203ENST00000395098 ZBTB47Q9UFB7 747 aaPredicted RBP16.25■□□□□ 0.19
VPS26A-203ENST00000395098 UBR3Q6ZT12 1888 aa16.24■□□□□ 0.19
VPS26A-203ENST00000395098 C4AP0C0L4 1744 aa16.24■□□□□ 0.19
VPS26A-203ENST00000395098 NUTM1Q86Y26 1132 aa16.24■□□□□ 0.19
VPS26A-203ENST00000395098 COPRSQ9NQ92 184 aa16.24■□□□□ 0.19
VPS26A-203ENST00000395098 RGL2O15211 777 aa16.24■□□□□ 0.19
VPS26A-203ENST00000395098 CSF1RP07333 972 aa16.24■□□□□ 0.19
VPS26A-203ENST00000395098 SH3TC1Q8TE82 1336 aa16.23■□□□□ 0.19
VPS26A-203ENST00000395098 SASH1O94885 1247 aa16.23■□□□□ 0.19
VPS26A-203ENST00000395098 HCLS1P14317 486 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-203ENST00000395098 ADRA2BP18089 450 aa16.23■□□□□ 0.19
VPS26A-203ENST00000395098 OS9Q13438 667 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-203ENST00000395098 FAM161AQ3B820 660 aa16.23■□□□□ 0.19
VPS26A-203ENST00000395098 HSP90AB4PQ58FF6 505 aa16.23■□□□□ 0.19
VPS26A-203ENST00000395098 TTLL11Q8NHH1 800 aa16.23■□□□□ 0.19
VPS26A-203ENST00000395098 AKT1S1Q96B36 256 aa16.23■□□□□ 0.19
VPS26A-203ENST00000395098 KIF1BPQ96EK5 621 aa16.23■□□□□ 0.19
VPS26A-203ENST00000395098 ZNF594Q96JF6 807 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-203ENST00000395098 SSFA2P28290 1259 aa16.22■□□□□ 0.19
VPS26A-203ENST00000395098 EN1Q05925 392 aaPredicted RBP16.22■□□□□ 0.19
VPS26A-203ENST00000395098 C8orf34Q49A92 452 aa16.22■□□□□ 0.19
VPS26A-203ENST00000395098 SALL3Q9BXA9 1300 aa16.22■□□□□ 0.19
VPS26A-203ENST00000395098 CTSWP56202 376 aa16.22■□□□□ 0.19
VPS26A-203ENST00000395098 G3BP1Q13283 466 aaKnown RBP eCLIP16.22■□□□□ 0.19
VPS26A-203ENST00000395098 PDE8AO60658 829 aa16.21■□□□□ 0.19
VPS26A-203ENST00000395098 EZH2Q15910 746 aaKnown RBP16.21■□□□□ 0.19
VPS26A-203ENST00000395098 CAMKK2Q96RR4 588 aa16.21■□□□□ 0.19
VPS26A-203ENST00000395098 BACH2Q9BYV9 841 aa16.21■□□□□ 0.19
VPS26A-203ENST00000395098 TSHZ3Q63HK5 1081 aa16.21■□□□□ 0.18
VPS26A-203ENST00000395098 GREM2Q9H772 168 aa16.21■□□□□ 0.18
VPS26A-203ENST00000395098 ERFEQ4G0M1 354 aa16.2■□□□□ 0.18
VPS26A-203ENST00000395098 GYS1P13807 737 aa16.2■□□□□ 0.18
VPS26A-203ENST00000395098 SETDB2Q96T68 719 aa16.2■□□□□ 0.18
VPS26A-203ENST00000395098 TFCP2L1Q9NZI6 479 aa16.2■□□□□ 0.18
VPS26A-203ENST00000395098 GSPT1P15170 499 aaKnown RBP16.19■□□□□ 0.18
VPS26A-203ENST00000395098 ATG9AQ7Z3C6 839 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms