RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 NBPF7P0C2Y1 421 aaPredicted RBP14.35□□□□□ -0.11
PPP3CB-203ENST00000394828 AIMP1Q12904 312 aaKnown RBP14.35□□□□□ -0.11
PPP3CB-203ENST00000394828 MYRIPQ8NFW9 859 aa14.35□□□□□ -0.11
PPP3CB-203ENST00000394828 KIF2CQ99661 725 aa14.35□□□□□ -0.11
PPP3CB-203ENST00000394828 ZNF771Q7L3S4 317 aaPredicted RBP14.34□□□□□ -0.11
PPP3CB-203ENST00000394828 XAGE3Q8WTP9 111 aa14.34□□□□□ -0.11
PPP3CB-203ENST00000394828 PIGBQ92521 554 aa14.34□□□□□ -0.11
PPP3CB-203ENST00000394828 SPATA31A5Q5VU36 1347 aa14.33□□□□□ -0.11
PPP3CB-203ENST00000394828 SPATA31A7Q8IWB4 1347 aa14.33□□□□□ -0.11
PPP3CB-203ENST00000394828 LETM1O95202 739 aaPredicted RBP14.33□□□□□ -0.11
PPP3CB-203ENST00000394828 UBTFL1P0CB47 393 aaPredicted RBP14.33□□□□□ -0.11
PPP3CB-203ENST00000394828 PRPF40AO75400 957 aaKnown RBP14.33□□□□□ -0.12
PPP3CB-203ENST00000394828 ATP8B2P98198 1209 aa14.33□□□□□ -0.12
PPP3CB-203ENST00000394828 CSPP1Q1MSJ5 1256 aa14.33□□□□□ -0.12
PPP3CB-203ENST00000394828 TMOD3Q9NYL9 352 aa14.33□□□□□ -0.12
PPP3CB-203ENST00000394828 NBPF26B4DH59 902 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 CWF19L2Q2TBE0 894 aaKnown RBP14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 NBPF14Q5TI25 921 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 NBPF10Q6P3W6 841 aaKnown RBP14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 COPS6Q7L5N1 327 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 NBPF15Q8N660 670 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 BCL9O00512 1426 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 PTCD1O75127 700 aaKnown RBP14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 GPT2Q8TD30 523 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 BCL2L12Q9HB09 334 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 THRAP3Q9Y2W1 955 aaKnown RBP14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 JCADQ9P266 1359 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 GOLGA6L22H0YM25 854 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 EXOC5O00471 708 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 CDK11BP21127 795 aaKnown RBP14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 ASAP1Q9ULH1 1129 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 BCL9LQ86UU0 1499 aa14.32□□□□□ -0.12
PPP3CB-203ENST00000394828 TRERF1Q96PN7 1200 aa14.31□□□□□ -0.12
PPP3CB-203ENST00000394828 HMMRO75330 724 aa14.31□□□□□ -0.12
PPP3CB-203ENST00000394828 ALDH1L1O75891 902 aa14.31□□□□□ -0.12
PPP3CB-203ENST00000394828 DDX58O95786 925 aaKnown RBP14.31□□□□□ -0.12
PPP3CB-203ENST00000394828 IGKV5-2P06315 115 aa14.31□□□□□ -0.12
PPP3CB-203ENST00000394828 ZNF445P59923 1031 aa14.31□□□□□ -0.12
PPP3CB-203ENST00000394828 TTC12Q9H892 705 aaPredicted RBP14.31□□□□□ -0.12
PPP3CB-203ENST00000394828 ATG3Q9NT62 314 aa14.31□□□□□ -0.12
PPP3CB-203ENST00000394828 KAT6BQ8WYB5 2073 aa14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 SMARCA5O60264 1052 aaPredicted RBP14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 KCNJ4P48050 445 aa14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 C16orf71Q8IYS4 520 aaPredicted RBP14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 LMBRD1Q9NUN5 540 aa14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 TMEM63CQ9P1W3 806 aa14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 IRX5P78411 483 aaPredicted RBP14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 HS1BP3Q53T59 392 aa14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 LINS1Q8NG48 757 aa14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 CERKQ8TCT0 537 aa14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 TJP1Q07157 1748 aa14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 TUBGCP6Q96RT7 1819 aa14.3□□□□□ -0.12
PPP3CB-203ENST00000394828 RIC3Q7Z5B4 369 aa14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 PLEKHM2Q8IWE5 1019 aa14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 OTUD7AQ8TE49 926 aaPredicted RBP14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 CDCA7Q9BWT1 371 aaPredicted RBP14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 EXOC6BQ9Y2D4 811 aa14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 K7ELQ4 463 aaPredicted RBP14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 APBB1O00213 710 aa14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 A1BGP04217 495 aa14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 KIAA2012Q0VF49 1180 aa14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 POLA2Q14181 598 aa14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 SSH3Q8TE77 659 aa14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 UTYO14607 1347 aa14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 IBTKQ9P2D0 1353 aaPredicted RBP14.29□□□□□ -0.12
PPP3CB-203ENST00000394828 FOXD4L6Q3SYB3 417 aaPredicted RBP14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 FOXD4L3Q6VB84 417 aaPredicted RBP14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 BARGINQ6ZT62 677 aa14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 METTL22Q9BUU2 404 aaPredicted RBP14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 ANKRD13DQ6ZTN6 518 aa14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 PPP1R42Q7Z4L9 355 aa14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 UNC5CLQ8IV45 518 aa14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 PDCL2Q8N4E4 241 aa14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 SNX21Q969T3 373 aa14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 CCDC39Q9UFE4 941 aa14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 NEURL1BA8MQ27 555 aa14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 C8orf37Q96NL8 207 aa14.28□□□□□ -0.12
PPP3CB-203ENST00000394828 RBM25P49756 843 aaKnown RBP14.27□□□□□ -0.12
PPP3CB-203ENST00000394828 DDB1Q16531 1140 aa14.27□□□□□ -0.12
PPP3CB-203ENST00000394828 MARCH10Q8NA82 808 aaPredicted RBP14.27□□□□□ -0.12
PPP3CB-203ENST00000394828 KAZALD1Q96I82 304 aa14.27□□□□□ -0.12
PPP3CB-203ENST00000394828 BMP2KLQ5H9B9 411 aa14.27□□□□□ -0.13
PPP3CB-203ENST00000394828 SLC4A9Q96Q91 983 aa14.27□□□□□ -0.13
PPP3CB-203ENST00000394828 MYD88Q99836 296 aa14.27□□□□□ -0.13
PPP3CB-203ENST00000394828 GSPT1P15170 499 aaKnown RBP14.26□□□□□ -0.13
PPP3CB-203ENST00000394828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.26□□□□□ -0.13
PPP3CB-203ENST00000394828 GRM8O00222 908 aa14.26□□□□□ -0.13
PPP3CB-203ENST00000394828 ZFP91Q96JP5 570 aaPredicted RBP14.26□□□□□ -0.13
PPP3CB-203ENST00000394828 C9orf78Q9NZ63 289 aaPredicted RBP14.26□□□□□ -0.13
PPP3CB-203ENST00000394828 TTLL7Q6ZT98 887 aa14.26□□□□□ -0.13
PPP3CB-203ENST00000394828 PLBD2Q8NHP8 589 aa14.26□□□□□ -0.13
PPP3CB-203ENST00000394828 CCDC9Q9Y3X0 531 aaKnown RBP14.26□□□□□ -0.13
PPP3CB-203ENST00000394828 KIF3AQ9Y496 699 aa14.26□□□□□ -0.13
PPP3CB-203ENST00000394828 MTX1Q13505 466 aa14.25□□□□□ -0.13
PPP3CB-203ENST00000394828 GCKRQ14397 625 aa14.25□□□□□ -0.13
PPP3CB-203ENST00000394828 DNAJC10Q8IXB1 793 aa14.25□□□□□ -0.13
PPP3CB-203ENST00000394828 ZGPATQ8N5A5 531 aaKnown RBP14.25□□□□□ -0.13
PPP3CB-203ENST00000394828 SUCLG2Q96I99 432 aa14.25□□□□□ -0.13
PPP3CB-203ENST00000394828 SRGAP3O43295 1099 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms