RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 UPF2Q9HAU5 1272 aaKnown RBP21.06■□□□□ 0.96
SLC6A4-202ENST00000394821 CWC25Q9NXE8 425 aaPredicted RBP21.06■□□□□ 0.96
SLC6A4-202ENST00000394821 SYNE4Q8N205 404 aa21.05■□□□□ 0.96
SLC6A4-202ENST00000394821 LRRC4BQ9NT99 713 aa21.04■□□□□ 0.96
SLC6A4-202ENST00000394821 PA2G4Q9UQ80 394 aaKnown RBP21.04■□□□□ 0.96
SLC6A4-202ENST00000394821 H7C1W4 665 aa21.04■□□□□ 0.96
SLC6A4-202ENST00000394821 MFAP1P55081 439 aaKnown RBP21.04■□□□□ 0.96
SLC6A4-202ENST00000394821 KLHDC4Q8TBB5 520 aa21.03■□□□□ 0.96
SLC6A4-202ENST00000394821 CCDC191Q8NCU4 936 aa21.03■□□□□ 0.96
SLC6A4-202ENST00000394821 TAF1LQ8IZX4 1826 aa21.02■□□□□ 0.96
SLC6A4-202ENST00000394821 SURF6O75683 361 aaKnown RBP21.02■□□□□ 0.96
SLC6A4-202ENST00000394821 MTX1Q13505 466 aa21.02■□□□□ 0.96
SLC6A4-202ENST00000394821 GSPT1P15170 499 aaKnown RBP21.02■□□□□ 0.95
SLC6A4-202ENST00000394821 FAM89AQ96GI7 184 aa21.02■□□□□ 0.95
SLC6A4-202ENST00000394821 COL15A1P39059 1388 aa21.01■□□□□ 0.95
SLC6A4-202ENST00000394821 CAMTA2O94983 1202 aa21.01■□□□□ 0.95
SLC6A4-202ENST00000394821 IBTKQ9P2D0 1353 aaPredicted RBP21.01■□□□□ 0.95
SLC6A4-202ENST00000394821 UBN2Q6ZU65 1347 aa21.01■□□□□ 0.95
SLC6A4-202ENST00000394821 ANKRD36CQ5JPF3 1778 aa21■□□□□ 0.95
SLC6A4-202ENST00000394821 FOXO4P98177 505 aa21■□□□□ 0.95
SLC6A4-202ENST00000394821 NBR1Q14596 966 aa21■□□□□ 0.95
SLC6A4-202ENST00000394821 NLRP10Q86W26 655 aa21■□□□□ 0.95
SLC6A4-202ENST00000394821 ERVV-1B6SEH8 477 aa20.99■□□□□ 0.95
SLC6A4-202ENST00000394821 C22orf23Q9BZE7 217 aa20.99■□□□□ 0.95
SLC6A4-202ENST00000394821 DAXXQ9UER7 740 aaPredicted RBP20.99■□□□□ 0.95
SLC6A4-202ENST00000394821 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.99■□□□□ 0.95
SLC6A4-202ENST00000394821 CNTNAP4Q9C0A0 1308 aa20.99■□□□□ 0.95
SLC6A4-202ENST00000394821 TRIM28Q13263 835 aaKnown RBP20.99■□□□□ 0.95
SLC6A4-202ENST00000394821 IL1RAPL2Q9NP60 686 aa20.99■□□□□ 0.95
SLC6A4-202ENST00000394821 GNPATO15228 680 aa20.98■□□□□ 0.95
SLC6A4-202ENST00000394821 FAM177BA6PVY3 158 aa20.97■□□□□ 0.95
SLC6A4-202ENST00000394821 LMBR1LQ6UX01 489 aa20.97■□□□□ 0.95
SLC6A4-202ENST00000394821 TTC22Q5TAA0 569 aa20.97■□□□□ 0.95
SLC6A4-202ENST00000394821 TBC1D9Q6ZT07 1266 aa20.97■□□□□ 0.95
SLC6A4-202ENST00000394821 ZNF34Q8IZ26 560 aa20.97■□□□□ 0.95
SLC6A4-202ENST00000394821 PROM2Q8N271 834 aa20.97■□□□□ 0.95
SLC6A4-202ENST00000394821 SIL1Q9H173 461 aa20.97■□□□□ 0.95
SLC6A4-202ENST00000394821 RABL6Q3YEC7 729 aaPredicted RBP20.96■□□□□ 0.95
SLC6A4-202ENST00000394821 TSHZ3Q63HK5 1081 aa20.96■□□□□ 0.95
SLC6A4-202ENST00000394821 LRRCC1Q9C099 1032 aa20.96■□□□□ 0.95
SLC6A4-202ENST00000394821 SRP68Q9UHB9 627 aaKnown RBP20.96■□□□□ 0.95
SLC6A4-202ENST00000394821 C4BP0C0L5 1744 aa20.96■□□□□ 0.95
SLC6A4-202ENST00000394821 CCDC85AQ96PX6 553 aaPredicted RBP20.96■□□□□ 0.95
SLC6A4-202ENST00000394821 RFX5P48382 616 aaPredicted RBP20.95■□□□□ 0.94
SLC6A4-202ENST00000394821 HDAC5Q9UQL6 1122 aa20.95■□□□□ 0.94
SLC6A4-202ENST00000394821 CHMP3Q9Y3E7 222 aa20.95■□□□□ 0.94
SLC6A4-202ENST00000394821 RC3H1Q5TC82 1133 aaKnown RBP20.95■□□□□ 0.94
SLC6A4-202ENST00000394821 SUSD4Q5VX71 490 aa20.95■□□□□ 0.94
SLC6A4-202ENST00000394821 ZBTB38Q8NAP3 1195 aaPredicted RBP20.95■□□□□ 0.94
SLC6A4-202ENST00000394821 RPS6KA4O75676 772 aa20.94■□□□□ 0.94
SLC6A4-202ENST00000394821 PHF14O94880 888 aa20.94■□□□□ 0.94
SLC6A4-202ENST00000394821 PCCAP05165 728 aaPredicted RBP20.94■□□□□ 0.94
SLC6A4-202ENST00000394821 HSP90AB3PQ58FF7 597 aa20.94■□□□□ 0.94
SLC6A4-202ENST00000394821 RHPN1Q8TCX5 695 aa20.94■□□□□ 0.94
SLC6A4-202ENST00000394821 BCORQ6W2J9 1755 aa20.94■□□□□ 0.94
SLC6A4-202ENST00000394821 BCL2L12Q9HB09 334 aa20.93■□□□□ 0.94
SLC6A4-202ENST00000394821 TRMT112Q9UI30 125 aaKnown RBP20.93■□□□□ 0.94
SLC6A4-202ENST00000394821 SASH1O94885 1247 aa20.92■□□□□ 0.94
SLC6A4-202ENST00000394821 PTPN12Q05209 780 aaKnown RBP20.92■□□□□ 0.94
SLC6A4-202ENST00000394821 USPL1Q5W0Q7 1092 aa20.92■□□□□ 0.94
SLC6A4-202ENST00000394821 NUTM1Q86Y26 1132 aa20.92■□□□□ 0.94
SLC6A4-202ENST00000394821 RBM25P49756 843 aaKnown RBP20.92■□□□□ 0.94
SLC6A4-202ENST00000394821 OS9Q13438 667 aaPredicted RBP20.92■□□□□ 0.94
SLC6A4-202ENST00000394821 ARHGEF1Q92888 912 aaKnown RBP20.92■□□□□ 0.94
SLC6A4-202ENST00000394821 TBC1D2Q9BYX2 928 aa20.92■□□□□ 0.94
SLC6A4-202ENST00000394821 NIP7Q9Y221 180 aaKnown RBP eCLIP20.92■□□□□ 0.94
SLC6A4-202ENST00000394821 CDC45O75419 566 aa20.91■□□□□ 0.94
SLC6A4-202ENST00000394821 ZNF594Q96JF6 807 aaPredicted RBP20.91■□□□□ 0.94
SLC6A4-202ENST00000394821 RTCBQ9Y3I0 505 aaKnown RBP20.91■□□□□ 0.94
SLC6A4-202ENST00000394821 SALL3Q9BXA9 1300 aa20.91■□□□□ 0.94
SLC6A4-202ENST00000394821 RAB11FIP3O75154 756 aa20.9■□□□□ 0.94
SLC6A4-202ENST00000394821 APBA3O96018 575 aa20.9■□□□□ 0.94
SLC6A4-202ENST00000394821 BECN1Q14457 450 aa20.9■□□□□ 0.94
SLC6A4-202ENST00000394821 TXNRD1Q16881 649 aa20.9■□□□□ 0.94
SLC6A4-202ENST00000394821 BICDL1Q6ZP65 573 aa20.9■□□□□ 0.94
SLC6A4-202ENST00000394821 SDSP20132 328 aa20.89■□□□□ 0.94
SLC6A4-202ENST00000394821 TBC1D9BQ66K14 1250 aa20.89■□□□□ 0.94
SLC6A4-202ENST00000394821 KIF1BPQ96EK5 621 aa20.89■□□□□ 0.94
SLC6A4-202ENST00000394821 OSBPL3Q9H4L5 887 aa20.89■□□□□ 0.94
SLC6A4-202ENST00000394821 C4AP0C0L4 1744 aa20.89■□□□□ 0.93
SLC6A4-202ENST00000394821 IRS4O14654 1257 aaPredicted RBP20.89■□□□□ 0.93
SLC6A4-202ENST00000394821 PDE1AP54750 535 aa20.89■□□□□ 0.93
SLC6A4-202ENST00000394821 AK7Q96M32 723 aa20.89■□□□□ 0.93
SLC6A4-202ENST00000394821 HCLS1P14317 486 aaPredicted RBP20.88■□□□□ 0.93
SLC6A4-202ENST00000394821 COPRSQ9NQ92 184 aa20.88■□□□□ 0.93
SLC6A4-202ENST00000394821 NARFQ9UHQ1 456 aa20.88■□□□□ 0.93
SLC6A4-202ENST00000394821 SCN7AQ01118 1682 aa20.88■□□□□ 0.93
SLC6A4-202ENST00000394821 G3BP1Q13283 466 aaKnown RBP eCLIP20.87■□□□□ 0.93
SLC6A4-202ENST00000394821 CDHR2Q9BYE9 1310 aa20.87■□□□□ 0.93
SLC6A4-202ENST00000394821 UBR3Q6ZT12 1888 aa20.86■□□□□ 0.93
SLC6A4-202ENST00000394821 NTSR2O95665 410 aa20.86■□□□□ 0.93
SLC6A4-202ENST00000394821 SLC27A3Q5K4L6 730 aa20.86■□□□□ 0.93
SLC6A4-202ENST00000394821 TTLL11Q8NHH1 800 aa20.86■□□□□ 0.93
SLC6A4-202ENST00000394821 KIF2CQ99661 725 aa20.86■□□□□ 0.93
SLC6A4-202ENST00000394821 UTP14AQ9BVJ6 771 aaKnown RBP20.86■□□□□ 0.93
SLC6A4-202ENST00000394821 PLA2G12BQ9BX93 195 aa20.86■□□□□ 0.93
SLC6A4-202ENST00000394821 PUS3Q9BZE2 481 aaKnown RBP20.86■□□□□ 0.93
SLC6A4-202ENST00000394821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.85■□□□□ 0.93
SLC6A4-202ENST00000394821 CSF1RP07333 972 aa20.85■□□□□ 0.93
SLC6A4-202ENST00000394821 MX1P20591 662 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms