RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 IL17RAQ96F46 866 aa16.25■□□□□ 0.19
GTF2F1-201ENST00000394456 EDC3Q96F86 508 aaKnown RBP16.25■□□□□ 0.19
GTF2F1-201ENST00000394456 ST3GAL1Q11201 340 aa16.25■□□□□ 0.19
GTF2F1-201ENST00000394456 CCDC83Q8IWF9 413 aa16.25■□□□□ 0.19
GTF2F1-201ENST00000394456 EAF2Q96CJ1 260 aaPredicted RBP16.25■□□□□ 0.19
GTF2F1-201ENST00000394456 DIAPH3Q9NSV4 1193 aa16.25■□□□□ 0.19
GTF2F1-201ENST00000394456 RIC3Q7Z5B4 369 aa16.25■□□□□ 0.19
GTF2F1-201ENST00000394456 NECAB1Q8N987 351 aa16.25■□□□□ 0.19
GTF2F1-201ENST00000394456 XAGE3Q8WTP9 111 aa16.25■□□□□ 0.19
GTF2F1-201ENST00000394456 JAKMIP1Q96N16 626 aaKnown RBP16.25■□□□□ 0.19
GTF2F1-201ENST00000394456 NDUFB9Q9Y6M9 179 aa16.25■□□□□ 0.19
GTF2F1-201ENST00000394456 DDX58O95786 925 aaKnown RBP16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 EPHA10Q5JZY3 1008 aa16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 CLASRPQ8N2M8 674 aaKnown RBP16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 PDLIM2Q96JY6 352 aa16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 PARP4Q9UKK3 1724 aaKnown RBP16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 MRC1P22897 1456 aa16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 ALDH1L1O75891 902 aa16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 SYT1P21579 422 aa16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 LARP1Q6PKG0 1096 aaKnown RBP16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 KIAA1211Q6ZU35 1233 aa16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 COPS6Q7L5N1 327 aa16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 ZCRB1Q8TBF4 217 aaKnown RBP16.24■□□□□ 0.19
GTF2F1-201ENST00000394456 GLRX3O76003 335 aaKnown RBP16.23■□□□□ 0.19
GTF2F1-201ENST00000394456 IGKV5-2P06315 115 aa16.23■□□□□ 0.19
GTF2F1-201ENST00000394456 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
GTF2F1-201ENST00000394456 ECHDC1Q9NTX5 307 aa16.23■□□□□ 0.19
GTF2F1-201ENST00000394456 SNRPA1P09661 255 aaKnown RBP16.23■□□□□ 0.19
GTF2F1-201ENST00000394456 LINS1Q8NG48 757 aa16.23■□□□□ 0.19
GTF2F1-201ENST00000394456 FMNL2Q96PY5 1086 aa16.23■□□□□ 0.19
GTF2F1-201ENST00000394456 BOLA2Q9H3K6 86 aa16.23■□□□□ 0.19
GTF2F1-201ENST00000394456 TCHHQ07283 1943 aa16.22■□□□□ 0.19
GTF2F1-201ENST00000394456 PRKCSHP14314 528 aaPredicted RBP16.22■□□□□ 0.19
GTF2F1-201ENST00000394456 FIBPO43427 364 aa16.22■□□□□ 0.19
GTF2F1-201ENST00000394456 EVA1CP58658 441 aa16.22■□□□□ 0.19
GTF2F1-201ENST00000394456 MTX1Q13505 466 aa16.22■□□□□ 0.19
GTF2F1-201ENST00000394456 LIMCH1Q9UPQ0 1083 aa16.22■□□□□ 0.19
GTF2F1-201ENST00000394456 PCDH11XQ9BZA7 1347 aa16.21■□□□□ 0.19
GTF2F1-201ENST00000394456 PCDH11YQ9BZA8 1340 aa16.21■□□□□ 0.19
GTF2F1-201ENST00000394456 WDR33Q9C0J8 1336 aaKnown RBP16.21■□□□□ 0.19
GTF2F1-201ENST00000394456 GRM8O00222 908 aa16.21■□□□□ 0.19
GTF2F1-201ENST00000394456 NMIQ13287 307 aaPredicted RBP16.21■□□□□ 0.19
GTF2F1-201ENST00000394456 USP42Q9H9J4 1324 aaKnown RBP16.21■□□□□ 0.19
GTF2F1-201ENST00000394456 NHSL1Q5SYE7 1610 aa16.21■□□□□ 0.19
GTF2F1-201ENST00000394456 A0A0D9SFI3 127 aa16.21■□□□□ 0.19
GTF2F1-201ENST00000394456 MBD3O95983 291 aa16.21■□□□□ 0.19
GTF2F1-201ENST00000394456 MYD88Q99836 296 aa16.21■□□□□ 0.19
GTF2F1-201ENST00000394456 KAT6BQ8WYB5 2073 aa16.2■□□□□ 0.18
GTF2F1-201ENST00000394456 ZSCAN22P10073 491 aaPredicted RBP16.2■□□□□ 0.18
GTF2F1-201ENST00000394456 CCDC9Q9Y3X0 531 aaKnown RBP16.2■□□□□ 0.18
GTF2F1-201ENST00000394456 STX6O43752 255 aa16.2■□□□□ 0.18
GTF2F1-201ENST00000394456 IL2RBP14784 551 aa16.2■□□□□ 0.18
GTF2F1-201ENST00000394456 FAM173BQ6P4H8 233 aa16.2■□□□□ 0.18
GTF2F1-201ENST00000394456 PDRG1Q9NUG6 133 aa16.2■□□□□ 0.18
GTF2F1-201ENST00000394456 TTC41PQ6P2S7 1318 aa16.19■□□□□ 0.18
GTF2F1-201ENST00000394456 MSNP26038 577 aaKnown RBP16.19■□□□□ 0.18
GTF2F1-201ENST00000394456 GJB2P29033 226 aa16.19■□□□□ 0.18
GTF2F1-201ENST00000394456 ME3Q16798 604 aa16.19■□□□□ 0.18
GTF2F1-201ENST00000394456 TSPY26PQ9H489 355 aa16.19■□□□□ 0.18
GTF2F1-201ENST00000394456 RBM8AQ9Y5S9 174 aaKnown RBP16.19■□□□□ 0.18
GTF2F1-201ENST00000394456 HSP90AB4PQ58FF6 505 aa16.19■□□□□ 0.18
GTF2F1-201ENST00000394456 LRP10Q7Z4F1 713 aa16.19■□□□□ 0.18
GTF2F1-201ENST00000394456 SMC3Q9UQE7 1217 aa16.19■□□□□ 0.18
GTF2F1-201ENST00000394456 GLI3P10071 1580 aa16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 DNM1Q05193 864 aaKnown RBP16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 NEXNQ0ZGT2 675 aa16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 CARD10Q9BWT7 1032 aa16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 SHANK3Q9BYB0 1731 aa16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 AFDNP55196 1824 aaKnown RBP16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 NEURL1BA8MQ27 555 aa16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 ANKRD13DQ6ZTN6 518 aa16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 ZNF589Q86UQ0 364 aaPredicted RBP16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 TPCN1Q9ULQ1 816 aa16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 PTCD1O75127 700 aaKnown RBP16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 NECTIN1Q15223 517 aa16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 FERMT3Q86UX7 667 aa16.18■□□□□ 0.18
GTF2F1-201ENST00000394456 CCDC171Q6TFL3 1326 aa16.17■□□□□ 0.18
GTF2F1-201ENST00000394456 F13A1P00488 732 aa16.17■□□□□ 0.18
GTF2F1-201ENST00000394456 CREB3L3Q68CJ9 461 aa16.17■□□□□ 0.18
GTF2F1-201ENST00000394456 ZNF830Q96NB3 372 aaPredicted RBP16.17■□□□□ 0.18
GTF2F1-201ENST00000394456 VPS37CA5D8V6 355 aaPredicted RBP16.17■□□□□ 0.18
GTF2F1-201ENST00000394456 G3BP1Q13283 466 aaKnown RBP eCLIP16.17■□□□□ 0.181e-8■■■■■ 33.6
GTF2F1-201ENST00000394456 SLFNL1Q499Z3 407 aa16.17■□□□□ 0.18
GTF2F1-201ENST00000394456 METTL22Q9BUU2 404 aaPredicted RBP16.17■□□□□ 0.18
GTF2F1-201ENST00000394456 NOL7Q9UMY1 257 aaKnown RBP16.17■□□□□ 0.18
GTF2F1-201ENST00000394456 MTMR6Q9Y217 621 aa16.17■□□□□ 0.18
GTF2F1-201ENST00000394456 LAMB4A4D0S4 1761 aa16.16■□□□□ 0.18
GTF2F1-201ENST00000394456 ATP5J2-PTCD1G3V325 749 aa16.16■□□□□ 0.18
GTF2F1-201ENST00000394456 KCNJ4P48050 445 aa16.16■□□□□ 0.18
GTF2F1-201ENST00000394456 GCKRQ14397 625 aa16.16■□□□□ 0.18
GTF2F1-201ENST00000394456 ZSWIM6Q9HCJ5 1215 aa16.16■□□□□ 0.18
GTF2F1-201ENST00000394456 CHMP3Q9Y3E7 222 aa16.16■□□□□ 0.18
GTF2F1-201ENST00000394456 ARFGEF2Q9Y6D5 1785 aa16.16■□□□□ 0.18
GTF2F1-201ENST00000394456 HCLS1P14317 486 aaPredicted RBP16.16■□□□□ 0.18
GTF2F1-201ENST00000394456 BTG4Q9NY30 223 aa16.16■□□□□ 0.18
GTF2F1-201ENST00000394456 GIMAP6Q6P9H5 292 aa16.15■□□□□ 0.18
GTF2F1-201ENST00000394456 EVI5LQ96CN4 794 aa16.15■□□□□ 0.18
GTF2F1-201ENST00000394456 USP25Q9UHP3 1055 aa16.15■□□□□ 0.18
GTF2F1-201ENST00000394456 R3HCC1Q9Y3T6 440 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms