RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	TMOD3	Q9NYL9	352 aa		11.27	□□□□□ -0.61
MITF-205	ENST00000394348	THRAP3	Q9Y2W1	955 aa	Known RBP	11.27	□□□□□ -0.61
MITF-205	ENST00000394348	ITGB4	P16144	1822 aa		11.27	□□□□□ -0.61
MITF-205	ENST00000394348	CIC	Q96RK0	1608 aa	Predicted RBP	11.27	□□□□□ -0.61
MITF-205	ENST00000394348	TJP1	Q07157	1748 aa		11.26	□□□□□ -0.61
MITF-205	ENST00000394348		K7ELQ4	463 aa	Predicted RBP	11.26	□□□□□ -0.61
MITF-205	ENST00000394348	DDIT3	P35638	169 aa		11.26	□□□□□ -0.61
MITF-205	ENST00000394348	OS9	Q13438	667 aa	Predicted RBP	11.26	□□□□□ -0.61
MITF-205	ENST00000394348	BICC1	Q9H694	974 aa	Known RBP	11.26	□□□□□ -0.61
MITF-205	ENST00000394348	COPRS	Q9NQ92	184 aa		11.26	□□□□□ -0.61
MITF-205	ENST00000394348	NBPF26	B4DH59	902 aa		11.25	□□□□□ -0.61
MITF-205	ENST00000394348	CLCN6	P51797	869 aa		11.25	□□□□□ -0.61
MITF-205	ENST00000394348	CASP7	P55210	303 aa		11.25	□□□□□ -0.61
MITF-205	ENST00000394348	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
MITF-205	ENST00000394348	NBPF14	Q5TI25	921 aa		11.25	□□□□□ -0.61
MITF-205	ENST00000394348	NBPF10	Q6P3W6	841 aa	Known RBP	11.25	□□□□□ -0.61
MITF-205	ENST00000394348	NBPF15	Q8N660	670 aa		11.25	□□□□□ -0.61
MITF-205	ENST00000394348	CCDC191	Q8NCU4	936 aa		11.25	□□□□□ -0.61
MITF-205	ENST00000394348	IL1RAPL2	Q9NP60	686 aa		11.25	□□□□□ -0.61
MITF-205	ENST00000394348	ECHDC1	Q9NTX5	307 aa		11.25	□□□□□ -0.61
MITF-205	ENST00000394348	BCL9	O00512	1426 aa		11.25	□□□□□ -0.61
MITF-205	ENST00000394348	TRIM6-TRIM34	B2RNG4	842 aa		11.24	□□□□□ -0.61
MITF-205	ENST00000394348		H7C1W4	665 aa		11.24	□□□□□ -0.61
MITF-205	ENST00000394348	GALR2	O43603	387 aa	Predicted RBP	11.24	□□□□□ -0.61
MITF-205	ENST00000394348	ST18	O60284	1047 aa		11.24	□□□□□ -0.61
MITF-205	ENST00000394348	MCM2	P49736	904 aa		11.24	□□□□□ -0.61
MITF-205	ENST00000394348	TRIM28	Q13263	835 aa	Known RBP	11.24	□□□□□ -0.61
MITF-205	ENST00000394348	TICAM2	Q86XR7	235 aa		11.24	□□□□□ -0.61
MITF-205	ENST00000394348	DDX54	Q8TDD1	881 aa	Known RBP	11.24	□□□□□ -0.61
MITF-205	ENST00000394348	SLK	Q9H2G2	1235 aa	Predicted RBP	11.24	□□□□□ -0.61
MITF-205	ENST00000394348	RFX7	Q2KHR2	1363 aa		11.24	□□□□□ -0.61
MITF-205	ENST00000394348	HIP1	O00291	1037 aa		11.23	□□□□□ -0.61
MITF-205	ENST00000394348	IFIT2	P09913	472 aa	Known RBP	11.23	□□□□□ -0.61
MITF-205	ENST00000394348	NUTM1	Q86Y26	1132 aa		11.23	□□□□□ -0.61
MITF-205	ENST00000394348	RILPL2	Q969X0	211 aa		11.23	□□□□□ -0.61
MITF-205	ENST00000394348	CWC25	Q9NXE8	425 aa	Predicted RBP	11.23	□□□□□ -0.61
MITF-205	ENST00000394348	STARD3NL	O95772	234 aa		11.22	□□□□□ -0.61
MITF-205	ENST00000394348	RFX5	P48382	616 aa	Predicted RBP	11.22	□□□□□ -0.61
MITF-205	ENST00000394348	GSE1	Q14687	1217 aa		11.22	□□□□□ -0.61
MITF-205	ENST00000394348	TSHZ3	Q63HK5	1081 aa		11.22	□□□□□ -0.61
MITF-205	ENST00000394348	RUFY2	Q8WXA3	655 aa		11.22	□□□□□ -0.61
MITF-205	ENST00000394348	RAD50	Q92878	1312 aa		11.22	□□□□□ -0.61
MITF-205	ENST00000394348	EVI5L	Q96CN4	794 aa		11.22	□□□□□ -0.61
MITF-205	ENST00000394348	KIF12	Q96FN5	646 aa		11.22	□□□□□ -0.61
MITF-205	ENST00000394348	ATG3	Q9NT62	314 aa		11.22	□□□□□ -0.61
MITF-205	ENST00000394348	DOT1L	Q8TEK3	1739 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348	SLIT2	O94813	1529 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348		A0A087WZG4	1122 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348	EXOC5	O00471	708 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348	SGSM2	O43147	1006 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348	SASH1	O94885	1247 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348	PTMS	P20962	102 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348	AACS	Q86V21	672 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348	PIGB	Q92521	554 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348	MS4A3	Q96HJ5	214 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348	ISCA1	Q9BUE6	129 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348	GPR108	Q9NPR9	543 aa		11.21	□□□□□ -0.61
MITF-205	ENST00000394348	ANKRD36C	Q5JPF3	1778 aa		11.21	□□□□□ -0.62
MITF-205	ENST00000394348	RREB1	Q92766	1687 aa		11.2	□□□□□ -0.62
MITF-205	ENST00000394348	SPATA31A1	Q5TZJ5	1347 aa		11.2	□□□□□ -0.62
MITF-205	ENST00000394348	TOM1	O60784	492 aa		11.2	□□□□□ -0.62
MITF-205	ENST00000394348	PTPN12	Q05209	780 aa	Known RBP	11.2	□□□□□ -0.62
MITF-205	ENST00000394348	HSP90AB3P	Q58FF7	597 aa		11.2	□□□□□ -0.62
MITF-205	ENST00000394348	EPHA10	Q5JZY3	1008 aa		11.2	□□□□□ -0.62
MITF-205	ENST00000394348	KIF6	Q6ZMV9	814 aa		11.2	□□□□□ -0.62
MITF-205	ENST00000394348	UBE3B	Q7Z3V4	1068 aa		11.2	□□□□□ -0.62
MITF-205	ENST00000394348	UNC5CL	Q8IV45	518 aa		11.2	□□□□□ -0.62
MITF-205	ENST00000394348	PLA2G12B	Q9BX93	195 aa		11.2	□□□□□ -0.62
MITF-205	ENST00000394348	CWC22	Q9HCG8	908 aa	Known RBP	11.2	□□□□□ -0.62
MITF-205	ENST00000394348	SNRK	Q9NRH2	765 aa		11.2	□□□□□ -0.62
MITF-205	ENST00000394348	PA2G4	Q9UQ80	394 aa	Known RBP	11.2	□□□□□ -0.62
MITF-205	ENST00000394348	ZNF831	Q5JPB2	1677 aa		11.2	□□□□□ -0.62
MITF-205	ENST00000394348	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.19	□□□□□ -0.62
MITF-205	ENST00000394348	MAP3K13	O43283	966 aa		11.19	□□□□□ -0.62
MITF-205	ENST00000394348	PTCD1	O75127	700 aa	Known RBP	11.19	□□□□□ -0.62
MITF-205	ENST00000394348	FRAT2	O75474	233 aa	Predicted RBP	11.19	□□□□□ -0.62
MITF-205	ENST00000394348	CIAO1	O76071	339 aa		11.19	□□□□□ -0.62
MITF-205	ENST00000394348	A1BG	P04217	495 aa		11.19	□□□□□ -0.62
MITF-205	ENST00000394348	HSPA4	P34932	840 aa		11.19	□□□□□ -0.62
MITF-205	ENST00000394348	TCIRG1	Q13488	830 aa		11.19	□□□□□ -0.62
MITF-205	ENST00000394348	BARGIN	Q6ZT62	677 aa		11.19	□□□□□ -0.62
MITF-205	ENST00000394348	TTLL7	Q6ZT98	887 aa		11.19	□□□□□ -0.62
MITF-205	ENST00000394348	BCL11A	Q9H165	835 aa		11.19	□□□□□ -0.62
MITF-205	ENST00000394348	ANO2	Q9NQ90	1003 aa		11.19	□□□□□ -0.62
MITF-205	ENST00000394348	SPEF2	Q9C093	1822 aa		11.19	□□□□□ -0.62
MITF-205	ENST00000394348	SPATA31A5	Q5VU36	1347 aa		11.18	□□□□□ -0.62
MITF-205	ENST00000394348	MAP3K15	Q6ZN16	1313 aa		11.18	□□□□□ -0.62
MITF-205	ENST00000394348	SPATA31A7	Q8IWB4	1347 aa		11.18	□□□□□ -0.62
MITF-205	ENST00000394348	CDHR2	Q9BYE9	1310 aa		11.18	□□□□□ -0.62
MITF-205	ENST00000394348	DDX11L8	A8MPP1	907 aa		11.18	□□□□□ -0.62
MITF-205	ENST00000394348	CD2BP2	O95400	341 aa	Known RBP	11.18	□□□□□ -0.62
MITF-205	ENST00000394348	HSP90AA1	P07900	732 aa	Known RBP	11.18	□□□□□ -0.62
MITF-205	ENST00000394348	PYGB	P11216	843 aa		11.18	□□□□□ -0.62
MITF-205	ENST00000394348	DEK	P35659	375 aa	Known RBP	11.18	□□□□□ -0.62
MITF-205	ENST00000394348	FOXO4	P98177	505 aa		11.18	□□□□□ -0.62
MITF-205	ENST00000394348	RAB3GAP1	Q15042	981 aa		11.18	□□□□□ -0.62
MITF-205	ENST00000394348	CLEC17A	Q6ZS10	378 aa		11.18	□□□□□ -0.62
MITF-205	ENST00000394348	EAF2	Q96CJ1	260 aa	Predicted RBP	11.18	□□□□□ -0.62
MITF-205	ENST00000394348	DIAPH3	Q9NSV4	1193 aa		11.18	□□□□□ -0.62
MITF-205	ENST00000394348	ASAP1	Q9ULH1	1129 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms