RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 CSPP1Q1MSJ5 1256 aa16.68■□□□□ 0.26
GAPVD1-205ENST00000394084 FAM184AQ8NB25 1140 aa16.68■□□□□ 0.26
GAPVD1-205ENST00000394084 ORAI2Q96SN7 254 aa16.68■□□□□ 0.26
GAPVD1-205ENST00000394084 TPCN1Q9ULQ1 816 aa16.68■□□□□ 0.26
GAPVD1-205ENST00000394084 SLC39A6Q13433 755 aa16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 FAM173BQ6P4H8 233 aa16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 FSD1Q9BTV5 496 aa16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 USP54Q70EL1 1684 aa16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 MYL6BP14649 208 aa16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 KIAA2012Q0VF49 1180 aa16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 LINS1Q8NG48 757 aa16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 ZSCAN31Q96LW9 406 aaPredicted RBP16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 TTC12Q9H892 705 aaPredicted RBP16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 A0A0D9SFI3 127 aa16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 TAF6LQ9Y6J9 622 aa16.67■□□□□ 0.26
GAPVD1-205ENST00000394084 FER1L4A9Z1Z3 1794 aa16.66■□□□□ 0.26
GAPVD1-205ENST00000394084 DNTTIP2Q5QJE6 756 aaKnown RBP16.66■□□□□ 0.26
GAPVD1-205ENST00000394084 RIC3Q7Z5B4 369 aa16.66■□□□□ 0.26
GAPVD1-205ENST00000394084 VSIG10Q8N0Z9 540 aa16.66■□□□□ 0.26
GAPVD1-205ENST00000394084 C17orf53Q8N3J3 647 aaPredicted RBP16.66■□□□□ 0.26
GAPVD1-205ENST00000394084 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
GAPVD1-205ENST00000394084 UVSSAQ2YD98 709 aa16.66■□□□□ 0.26
GAPVD1-205ENST00000394084 EDC3Q96F86 508 aaKnown RBP16.66■□□□□ 0.26
GAPVD1-205ENST00000394084 TM6SF1Q9BZW5 370 aa16.66■□□□□ 0.26
GAPVD1-205ENST00000394084 CRYBG1Q9Y4K1 1723 aa16.65■□□□□ 0.26
GAPVD1-205ENST00000394084 SLC27A2O14975 620 aa16.65■□□□□ 0.26
GAPVD1-205ENST00000394084 TERF1P54274 439 aa16.65■□□□□ 0.26
GAPVD1-205ENST00000394084 LARP1BQ659C4 914 aaKnown RBP16.65■□□□□ 0.26
GAPVD1-205ENST00000394084 AXIN2Q9Y2T1 843 aa16.65■□□□□ 0.26
GAPVD1-205ENST00000394084 LETM1O95202 739 aaPredicted RBP16.65■□□□□ 0.26
GAPVD1-205ENST00000394084 ARHGEF25Q86VW2 580 aa16.65■□□□□ 0.26
GAPVD1-205ENST00000394084 DDX58O95786 925 aaKnown RBP16.65■□□□□ 0.26
GAPVD1-205ENST00000394084 MAP4K1Q92918 833 aa16.65■□□□□ 0.26
GAPVD1-205ENST00000394084 PIP4K2AP48426 406 aaPredicted RBP16.64■□□□□ 0.25
GAPVD1-205ENST00000394084 STK3Q13188 491 aa16.64■□□□□ 0.25
GAPVD1-205ENST00000394084 KCNB2Q92953 911 aa16.64■□□□□ 0.25
GAPVD1-205ENST00000394084 HDAC5Q9UQL6 1122 aa16.64■□□□□ 0.25
GAPVD1-205ENST00000394084 LMO7Q8WWI1 1683 aa16.64■□□□□ 0.25
GAPVD1-205ENST00000394084 IGKV5-2P06315 115 aa16.64■□□□□ 0.25
GAPVD1-205ENST00000394084 CDC37L1Q7L3B6 337 aa16.64■□□□□ 0.25
GAPVD1-205ENST00000394084 PDCL3Q9H2J4 239 aa16.64■□□□□ 0.25
GAPVD1-205ENST00000394084 DDX21Q9NR30 783 aaKnown RBP eCLIP16.64■□□□□ 0.25
GAPVD1-205ENST00000394084 ARID3AQ99856 593 aa16.63■□□□□ 0.25
GAPVD1-205ENST00000394084 NDUFB9Q9Y6M9 179 aa16.63■□□□□ 0.25
GAPVD1-205ENST00000394084 PDIA6Q15084 440 aa16.63■□□□□ 0.25
GAPVD1-205ENST00000394084 EPHA10Q5JZY3 1008 aa16.63■□□□□ 0.25
GAPVD1-205ENST00000394084 BLOC1S2Q6QNY1 142 aa16.63■□□□□ 0.25
GAPVD1-205ENST00000394084 ZNF589Q86UQ0 364 aaPredicted RBP16.63■□□□□ 0.25
GAPVD1-205ENST00000394084 ANKLE2Q86XL3 938 aa16.63■□□□□ 0.25
GAPVD1-205ENST00000394084 SASS6Q6UVJ0 657 aa16.62■□□□□ 0.25
GAPVD1-205ENST00000394084 TTC6Q86TZ1 520 aa16.62■□□□□ 0.25
GAPVD1-205ENST00000394084 MYD88Q99836 296 aa16.62■□□□□ 0.25
GAPVD1-205ENST00000394084 KDM4AO75164 1064 aa16.62■□□□□ 0.25
GAPVD1-205ENST00000394084 FUCA2Q9BTY2 467 aa16.62■□□□□ 0.25
GAPVD1-205ENST00000394084 HIP1O00291 1037 aa16.61■□□□□ 0.25
GAPVD1-205ENST00000394084 PSMA5P28066 241 aa16.61■□□□□ 0.25
GAPVD1-205ENST00000394084 ZC3H6P61129 1189 aaKnown RBP16.61■□□□□ 0.25
GAPVD1-205ENST00000394084 CAMK4Q16566 473 aa16.61■□□□□ 0.25
GAPVD1-205ENST00000394084 XAGE3Q8WTP9 111 aa16.61■□□□□ 0.25
GAPVD1-205ENST00000394084 HEG1Q9ULI3 1381 aa16.61■□□□□ 0.25
GAPVD1-205ENST00000394084 AP5Z1O43299 807 aa16.61■□□□□ 0.25
GAPVD1-205ENST00000394084 CHGBP05060 677 aa16.61■□□□□ 0.25
GAPVD1-205ENST00000394084 TFIP11Q9UBB9 837 aaKnown RBP16.61■□□□□ 0.25
GAPVD1-205ENST00000394084 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
GAPVD1-205ENST00000394084 NEXNQ0ZGT2 675 aa16.6■□□□□ 0.25
GAPVD1-205ENST00000394084 COPS6Q7L5N1 327 aa16.6■□□□□ 0.25
GAPVD1-205ENST00000394084 NCAPD2Q15021 1401 aa16.6■□□□□ 0.25
GAPVD1-205ENST00000394084 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
GAPVD1-205ENST00000394084 KRT85P78386 507 aa16.6■□□□□ 0.25
GAPVD1-205ENST00000394084 RNF20Q5VTR2 975 aa16.6■□□□□ 0.25
GAPVD1-205ENST00000394084 SPC24Q8NBT2 197 aa16.6■□□□□ 0.25
GAPVD1-205ENST00000394084 NEURL1BA8MQ27 555 aa16.59■□□□□ 0.25
GAPVD1-205ENST00000394084 LIG1P18858 919 aa16.59■□□□□ 0.25
GAPVD1-205ENST00000394084 LARP1Q6PKG0 1096 aaKnown RBP16.59■□□□□ 0.25
GAPVD1-205ENST00000394084 UTYO14607 1347 aa16.59■□□□□ 0.25
GAPVD1-205ENST00000394084 RPS6KB1P23443 525 aa16.59■□□□□ 0.25
GAPVD1-205ENST00000394084 NOLC1Q14978 699 aaKnown RBP eCLIP16.59■□□□□ 0.25
GAPVD1-205ENST00000394084 ZNF790Q6PG37 636 aa16.59■□□□□ 0.25
GAPVD1-205ENST00000394084 PIBF1Q8WXW3 757 aa16.59■□□□□ 0.25
GAPVD1-205ENST00000394084 TOB2Q14106 344 aaPredicted RBP16.58■□□□□ 0.24
GAPVD1-205ENST00000394084 GCKRQ14397 625 aa16.58■□□□□ 0.24
GAPVD1-205ENST00000394084 NFATC2IPQ8NCF5 419 aa16.58■□□□□ 0.24
GAPVD1-205ENST00000394084 NPHP4O75161 1426 aaPredicted RBP16.58■□□□□ 0.24
GAPVD1-205ENST00000394084 CCDC129Q6ZRS4 1044 aa16.58■□□□□ 0.24
GAPVD1-205ENST00000394084 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.24
GAPVD1-205ENST00000394084 NLRP2Q9NX02 1062 aa16.58■□□□□ 0.24
GAPVD1-205ENST00000394084 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
GAPVD1-205ENST00000394084 CCDC192P0DO97 292 aa16.57■□□□□ 0.24
GAPVD1-205ENST00000394084 TSC1Q92574 1164 aa16.57■□□□□ 0.24
GAPVD1-205ENST00000394084 MED23Q9ULK4 1368 aa16.57■□□□□ 0.24
GAPVD1-205ENST00000394084 TFCP2Q12800 502 aa16.57■□□□□ 0.24
GAPVD1-205ENST00000394084 DBNLQ9UJU6 430 aaKnown RBP16.57■□□□□ 0.24
GAPVD1-205ENST00000394084 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
GAPVD1-205ENST00000394084 GOLGA6L4A6NEF3 574 aa16.56■□□□□ 0.24
GAPVD1-205ENST00000394084 JAK2O60674 1132 aa16.56■□□□□ 0.24
GAPVD1-205ENST00000394084 TAF5LO75529 589 aa16.56■□□□□ 0.24
GAPVD1-205ENST00000394084 RAPGEF4Q8WZA2 1011 aa16.56■□□□□ 0.24
GAPVD1-205ENST00000394084 SEC62Q99442 399 aaKnown RBP16.56■□□□□ 0.24
GAPVD1-205ENST00000394084 NUP62CLQ9H1M0 184 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms