RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 PRPF40AO75400 957 aaKnown RBP17.74■□□□□ 0.43
CDH16-202ENST00000394055 RUFY2Q8WXA3 655 aa17.74■□□□□ 0.43
CDH16-202ENST00000394055 IL17RAQ96F46 866 aa17.74■□□□□ 0.43
CDH16-202ENST00000394055 LMBRD1Q9NUN5 540 aa17.74■□□□□ 0.43
CDH16-202ENST00000394055 EPB41L2O43491 1005 aaKnown RBP17.73■□□□□ 0.43
CDH16-202ENST00000394055 MRE11P49959 708 aa17.73■□□□□ 0.43
CDH16-202ENST00000394055 KLHL40Q2TBA0 621 aa17.73■□□□□ 0.43
CDH16-202ENST00000394055 TTLL7Q6ZT98 887 aa17.73■□□□□ 0.43
CDH16-202ENST00000394055 SOS2Q07890 1332 aaPredicted RBP17.73■□□□□ 0.43
CDH16-202ENST00000394055 A1BGP04217 495 aa17.73■□□□□ 0.43
CDH16-202ENST00000394055 FOXD4L6Q3SYB3 417 aaPredicted RBP17.73■□□□□ 0.43
CDH16-202ENST00000394055 PRPF40BQ6NWY9 871 aaKnown RBP17.73■□□□□ 0.43
CDH16-202ENST00000394055 FOXD4L3Q6VB84 417 aaPredicted RBP17.73■□□□□ 0.43
CDH16-202ENST00000394055 EDC3Q96F86 508 aaKnown RBP17.73■□□□□ 0.43
CDH16-202ENST00000394055 COL5A2P05997 1499 aaPredicted RBP17.73■□□□□ 0.43
CDH16-202ENST00000394055 CHMP3Q9Y3E7 222 aa17.72■□□□□ 0.43
CDH16-202ENST00000394055 IL2RBP14784 551 aa17.72■□□□□ 0.43
CDH16-202ENST00000394055 NMIQ13287 307 aaPredicted RBP17.72■□□□□ 0.43
CDH16-202ENST00000394055 PLBD2Q8NHP8 589 aa17.72■□□□□ 0.43
CDH16-202ENST00000394055 DTNBO60941 627 aa17.71■□□□□ 0.43
CDH16-202ENST00000394055 CASTP20810 708 aaKnown RBP17.71■□□□□ 0.43
CDH16-202ENST00000394055 AK2P54819 239 aa17.71■□□□□ 0.43
CDH16-202ENST00000394055 EVA1CP58658 441 aa17.71■□□□□ 0.43
CDH16-202ENST00000394055 PTPN12Q05209 780 aaKnown RBP17.71■□□□□ 0.43
CDH16-202ENST00000394055 TFCP2Q12800 502 aa17.71■□□□□ 0.43
CDH16-202ENST00000394055 CAVIN1Q6NZI2 390 aaKnown RBP17.71■□□□□ 0.43
CDH16-202ENST00000394055 FSD1Q9BTV5 496 aa17.71■□□□□ 0.43
CDH16-202ENST00000394055 CCDC9Q9Y3X0 531 aaKnown RBP17.71■□□□□ 0.43
CDH16-202ENST00000394055 AFDNP55196 1824 aaKnown RBP17.71■□□□□ 0.43
CDH16-202ENST00000394055 GLI3P10071 1580 aa17.71■□□□□ 0.43
CDH16-202ENST00000394055 ZBTB3Q9H5J0 574 aa17.71■□□□□ 0.43
CDH16-202ENST00000394055 NDUFB9Q9Y6M9 179 aa17.71■□□□□ 0.43
CDH16-202ENST00000394055 RFX5P48382 616 aaPredicted RBP17.71■□□□□ 0.42
CDH16-202ENST00000394055 ADCK5Q3MIX3 580 aa17.71■□□□□ 0.42
CDH16-202ENST00000394055 INTS4Q96HW7 963 aaKnown RBP17.71■□□□□ 0.42
CDH16-202ENST00000394055 ARFGEF2Q9Y6D5 1785 aa17.7■□□□□ 0.42
CDH16-202ENST00000394055 A0A0U1RQG5 324 aaPredicted RBP17.7■□□□□ 0.42
CDH16-202ENST00000394055 RRP9O43818 475 aaKnown RBP17.7■□□□□ 0.42
CDH16-202ENST00000394055 TTC14Q96N46 770 aa17.7■□□□□ 0.42
CDH16-202ENST00000394055 COPRSQ9NQ92 184 aa17.7■□□□□ 0.42
CDH16-202ENST00000394055 KCNJ4P48050 445 aa17.7■□□□□ 0.42
CDH16-202ENST00000394055 LMBR1LQ6UX01 489 aa17.7■□□□□ 0.42
CDH16-202ENST00000394055 JAKMIP1Q96N16 626 aaKnown RBP17.7■□□□□ 0.42
CDH16-202ENST00000394055 ZNF330Q9Y3S2 320 aaPredicted RBP17.7■□□□□ 0.42
CDH16-202ENST00000394055 PLEKHG2Q9H7P9 1386 aa17.69■□□□□ 0.42
CDH16-202ENST00000394055 A0A0D9SFI3 127 aa17.69■□□□□ 0.42
CDH16-202ENST00000394055 BRD1O95696 1058 aa17.69■□□□□ 0.42
CDH16-202ENST00000394055 RUFY3Q7L099 469 aa17.69■□□□□ 0.42
CDH16-202ENST00000394055 DBNLQ9UJU6 430 aaKnown RBP17.69■□□□□ 0.42
CDH16-202ENST00000394055 PARP4Q9UKK3 1724 aaKnown RBP17.69■□□□□ 0.42
CDH16-202ENST00000394055 CCDC171Q6TFL3 1326 aa17.69■□□□□ 0.42
CDH16-202ENST00000394055 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
CDH16-202ENST00000394055 ERVV-2B6SEH9 535 aa17.68■□□□□ 0.42
CDH16-202ENST00000394055 CARD10Q9BWT7 1032 aa17.68■□□□□ 0.42
CDH16-202ENST00000394055 CASP7P55210 303 aa17.68■□□□□ 0.42
CDH16-202ENST00000394055 RABL6Q3YEC7 729 aaPredicted RBP17.68■□□□□ 0.42
CDH16-202ENST00000394055 TNNI3KQ59H18 835 aa17.68■□□□□ 0.42
CDH16-202ENST00000394055 RBM27Q9P2N5 1060 aaKnown RBP17.68■□□□□ 0.42
CDH16-202ENST00000394055 RBM8AQ9Y5S9 174 aaKnown RBP17.68■□□□□ 0.42
CDH16-202ENST00000394055 FPGT-TNNI3KV9GXZ4 949 aa17.68■□□□□ 0.42
CDH16-202ENST00000394055 GPT2Q8TD30 523 aa17.67■□□□□ 0.42
CDH16-202ENST00000394055 LARGE1O95461 756 aa17.67■□□□□ 0.42
CDH16-202ENST00000394055 LAMB4A4D0S4 1761 aa17.67■□□□□ 0.42
CDH16-202ENST00000394055 DBNDD2Q9BQY9 259 aa17.67■□□□□ 0.42
CDH16-202ENST00000394055 KDM4FA0A1W2PPD8 638 aa17.66■□□□□ 0.42
CDH16-202ENST00000394055 CHGBP05060 677 aa17.66■□□□□ 0.42
CDH16-202ENST00000394055 COL9A3Q14050 684 aaPredicted RBP17.66■□□□□ 0.42
CDH16-202ENST00000394055 NSFL1CQ9UNZ2 370 aaKnown RBP17.66■□□□□ 0.42
CDH16-202ENST00000394055 LIMCH1Q9UPQ0 1083 aa17.66■□□□□ 0.42
CDH16-202ENST00000394055 NECTIN1Q15223 517 aa17.66■□□□□ 0.42
CDH16-202ENST00000394055 DNAJC2Q99543 621 aaKnown RBP17.66■□□□□ 0.42
CDH16-202ENST00000394055 ISY1Q9ULR0 285 aaKnown RBP17.66■□□□□ 0.42
CDH16-202ENST00000394055 HIP1O00291 1037 aa17.65■□□□□ 0.42
CDH16-202ENST00000394055 CREB3L3Q68CJ9 461 aa17.65■□□□□ 0.42
CDH16-202ENST00000394055 ZNF589Q86UQ0 364 aaPredicted RBP17.65■□□□□ 0.42
CDH16-202ENST00000394055 PDRG1Q9NUG6 133 aa17.65■□□□□ 0.42
CDH16-202ENST00000394055 CWC25Q9NXE8 425 aaPredicted RBP17.65■□□□□ 0.42
CDH16-202ENST00000394055 KCPQ6ZWJ8 1503 aa17.65■□□□□ 0.42
CDH16-202ENST00000394055 FOXO4P98177 505 aa17.65■□□□□ 0.42
CDH16-202ENST00000394055 NKX1-1Q15270 411 aaPredicted RBP17.65■□□□□ 0.42
CDH16-202ENST00000394055 ZSCAN23Q3MJ62 389 aa17.65■□□□□ 0.42
CDH16-202ENST00000394055 GDPD2Q9HCC8 539 aa17.65■□□□□ 0.42
CDH16-202ENST00000394055 ERBB4Q15303 1308 aa17.64■□□□□ 0.41
CDH16-202ENST00000394055 H7C1W4 665 aa17.64■□□□□ 0.41
CDH16-202ENST00000394055 ZKSCAN1P17029 563 aaPredicted RBP17.64■□□□□ 0.41
CDH16-202ENST00000394055 RBM10P98175 930 aaKnown RBP17.64■□□□□ 0.41
CDH16-202ENST00000394055 CYP46A1Q9Y6A2 500 aa17.64■□□□□ 0.41
CDH16-202ENST00000394055 TAF6LQ9Y6J9 622 aa17.64■□□□□ 0.41
CDH16-202ENST00000394055 CCDC83Q8IWF9 413 aa17.63■□□□□ 0.41
CDH16-202ENST00000394055 MAP4K1Q92918 833 aa17.63■□□□□ 0.41
CDH16-202ENST00000394055 TCEANC2Q96MN5 208 aa17.63■□□□□ 0.41
CDH16-202ENST00000394055 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
CDH16-202ENST00000394055 TMOD3Q9NYL9 352 aa17.63■□□□□ 0.41
CDH16-202ENST00000394055 RPAP1Q9BWH6 1393 aaPredicted RBP17.63■□□□□ 0.41
CDH16-202ENST00000394055 SLC27A2O14975 620 aa17.62■□□□□ 0.41
CDH16-202ENST00000394055 ATP5JP18859 108 aa17.62■□□□□ 0.41
CDH16-202ENST00000394055 ZNF594Q96JF6 807 aaPredicted RBP17.62■□□□□ 0.41
CDH16-202ENST00000394055 NEUROD6Q96NK8 337 aa17.62■□□□□ 0.41
CDH16-202ENST00000394055 ZSWIM6Q9HCJ5 1215 aa17.62■□□□□ 0.41
CDH16-202ENST00000394055 RRAGDQ9NQL2 400 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms