RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 RABL6Q3YEC7 729 aaPredicted RBP24.24■■□□□ 1.47
RAB5C-202ENST00000393860 LMBR1LQ6UX01 489 aa24.24■■□□□ 1.47
RAB5C-202ENST00000393860 CHMP3Q9Y3E7 222 aa24.24■■□□□ 1.47
RAB5C-202ENST00000393860 COL15A1P39059 1388 aa24.24■■□□□ 1.47
RAB5C-202ENST00000393860 ONECUT3O60422 494 aaPredicted RBP24.23■■□□□ 1.47
RAB5C-202ENST00000393860 EIF5P55010 431 aaKnown RBP24.23■■□□□ 1.47
RAB5C-202ENST00000393860 TBC1D9Q6ZT07 1266 aa24.23■■□□□ 1.47
RAB5C-202ENST00000393860 LINC00116Q8NCU8 138 aa24.23■■□□□ 1.47
RAB5C-202ENST00000393860 SDSP20132 328 aa24.23■■□□□ 1.47
RAB5C-202ENST00000393860 OSBPL3Q9H4L5 887 aa24.23■■□□□ 1.47
RAB5C-202ENST00000393860 SBF2Q86WG5 1849 aa24.22■■□□□ 1.47
RAB5C-202ENST00000393860 G3BP1Q13283 466 aaKnown RBP eCLIP24.22■■□□□ 1.473e-6■■□□□ 13.8
RAB5C-202ENST00000393860 IPO9Q96P70 1041 aaKnown RBP24.22■■□□□ 1.47
RAB5C-202ENST00000393860 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.22■■□□□ 1.47
RAB5C-202ENST00000393860 CDC45O75419 566 aa24.22■■□□□ 1.47
RAB5C-202ENST00000393860 RFX5P48382 616 aaPredicted RBP24.22■■□□□ 1.47
RAB5C-202ENST00000393860 UPF2Q9HAU5 1272 aaKnown RBP24.22■■□□□ 1.47
RAB5C-202ENST00000393860 SASH1O94885 1247 aa24.21■■□□□ 1.47
RAB5C-202ENST00000393860 FAM89AQ96GI7 184 aa24.21■■□□□ 1.47
RAB5C-202ENST00000393860 SYNE4Q8N205 404 aa24.2■■□□□ 1.46
RAB5C-202ENST00000393860 TUBGCP6Q96RT7 1819 aa24.2■■□□□ 1.46
RAB5C-202ENST00000393860 TRIM28Q13263 835 aaKnown RBP24.2■■□□□ 1.46
RAB5C-202ENST00000393860 NLRP10Q86W26 655 aa24.2■■□□□ 1.46
RAB5C-202ENST00000393860 ERC1Q8IUD2 1116 aa24.2■■□□□ 1.46
RAB5C-202ENST00000393860 ZNF831Q5JPB2 1677 aa24.19■■□□□ 1.46
RAB5C-202ENST00000393860 PTPN12Q05209 780 aaKnown RBP24.19■■□□□ 1.46
RAB5C-202ENST00000393860 HSP90AB3PQ58FF7 597 aa24.19■■□□□ 1.46
RAB5C-202ENST00000393860 STAP2Q9UGK3 403 aa24.19■■□□□ 1.46
RAB5C-202ENST00000393860 BRWD3Q6RI45 1802 aa24.18■■□□□ 1.46
RAB5C-202ENST00000393860 ERVV-1B6SEH8 477 aa24.18■■□□□ 1.46
RAB5C-202ENST00000393860 SMIM5Q71RC9 77 aa24.18■■□□□ 1.46
RAB5C-202ENST00000393860 CLASRPQ8N2M8 674 aaKnown RBP24.18■■□□□ 1.46
RAB5C-202ENST00000393860 PCCAP05165 728 aaPredicted RBP24.17■■□□□ 1.46
RAB5C-202ENST00000393860 TBC1D32Q96NH3 1257 aa24.17■■□□□ 1.46
RAB5C-202ENST00000393860 COPRSQ9NQ92 184 aa24.17■■□□□ 1.46
RAB5C-202ENST00000393860 UBN2Q6ZU65 1347 aa24.17■■□□□ 1.46
RAB5C-202ENST00000393860 ZBTB38Q8NAP3 1195 aaPredicted RBP24.16■■□□□ 1.46
RAB5C-202ENST00000393860 CCDC85AQ96PX6 553 aaPredicted RBP24.16■■□□□ 1.46
RAB5C-202ENST00000393860 AACSQ86V21 672 aa24.16■■□□□ 1.46
RAB5C-202ENST00000393860 CAMTA2O94983 1202 aa24.15■■□□□ 1.46
RAB5C-202ENST00000393860 MAP4K4O95819 1239 aaPredicted RBP24.15■■□□□ 1.46
RAB5C-202ENST00000393860 FAM177BA6PVY3 158 aa24.14■■□□□ 1.46
RAB5C-202ENST00000393860 TRIM6-TRIM34B2RNG4 842 aa24.14■■□□□ 1.46
RAB5C-202ENST00000393860 ZNF594Q96JF6 807 aaPredicted RBP24.14■■□□□ 1.46
RAB5C-202ENST00000393860 CCNL1Q9UK58 526 aaPredicted RBP24.14■■□□□ 1.46
RAB5C-202ENST00000393860 IFIT2P09913 472 aaKnown RBP24.14■■□□□ 1.45
RAB5C-202ENST00000393860 ZNF34Q8IZ26 560 aa24.14■■□□□ 1.45
RAB5C-202ENST00000393860 PI4K2BQ8TCG2 481 aa24.14■■□□□ 1.45
RAB5C-202ENST00000393860 RILPL2Q969X0 211 aa24.14■■□□□ 1.45
RAB5C-202ENST00000393860 C22orf23Q9BZE7 217 aa24.14■■□□□ 1.45
RAB5C-202ENST00000393860 CCDC8Q9H0W5 538 aaPredicted RBP24.14■■□□□ 1.45
RAB5C-202ENST00000393860 TRMT112Q9UI30 125 aaKnown RBP24.14■■□□□ 1.45
RAB5C-202ENST00000393860 AOX1Q06278 1338 aa24.13■■□□□ 1.45
RAB5C-202ENST00000393860 EAF2Q96CJ1 260 aaPredicted RBP24.13■■□□□ 1.45
RAB5C-202ENST00000393860 TLR7Q9NYK1 1049 aaKnown RBP24.13■■□□□ 1.45
RAB5C-202ENST00000393860 LY75O60449 1722 aa24.13■■□□□ 1.45
RAB5C-202ENST00000393860 TFCP2Q12800 502 aa24.12■■□□□ 1.45
RAB5C-202ENST00000393860 BCORQ6W2J9 1755 aa24.11■■□□□ 1.45
RAB5C-202ENST00000393860 CNTNAP4Q9C0A0 1308 aa24.11■■□□□ 1.45
RAB5C-202ENST00000393860 KRT27Q7Z3Y8 459 aa24.11■■□□□ 1.45
RAB5C-202ENST00000393860 DDRGK1Q96HY6 314 aa24.11■■□□□ 1.45
RAB5C-202ENST00000393860 CDHR2Q9BYE9 1310 aa24.1■■□□□ 1.45
RAB5C-202ENST00000393860 SUSD4Q5VX71 490 aa24.1■■□□□ 1.45
RAB5C-202ENST00000393860 IRS4O14654 1257 aaPredicted RBP24.09■■□□□ 1.45
RAB5C-202ENST00000393860 USP42Q9H9J4 1324 aaKnown RBP24.09■■□□□ 1.45
RAB5C-202ENST00000393860 TAF1LQ8IZX4 1826 aa24.09■■□□□ 1.45
RAB5C-202ENST00000393860 SLC4A3P48751 1232 aa24.08■■□□□ 1.45
RAB5C-202ENST00000393860 LRRC24Q50LG9 513 aa24.08■■□□□ 1.45
RAB5C-202ENST00000393860 PLA2G12BQ9BX93 195 aa24.08■■□□□ 1.45
RAB5C-202ENST00000393860 BCL11BQ9C0K0 894 aaPredicted RBP24.08■■□□□ 1.45
RAB5C-202ENST00000393860 AK9Q5TCS8 1911 aa24.08■■□□□ 1.45
RAB5C-202ENST00000393860 GNPATO15228 680 aa24.08■■□□□ 1.44
RAB5C-202ENST00000393860 CASC1Q6TDU7 716 aa24.08■■□□□ 1.44
RAB5C-202ENST00000393860 ECHDC1Q9NTX5 307 aa24.08■■□□□ 1.44
RAB5C-202ENST00000393860 NIP7Q9Y221 180 aaKnown RBP eCLIP24.08■■□□□ 1.44
RAB5C-202ENST00000393860 TTC41PQ6P2S7 1318 aa24.07■■□□□ 1.44
RAB5C-202ENST00000393860 CCDC57Q2TAC2 916 aa24.07■■□□□ 1.44
RAB5C-202ENST00000393860 ATG9AQ7Z3C6 839 aa24.07■■□□□ 1.44
RAB5C-202ENST00000393860 PUS3Q9BZE2 481 aaKnown RBP24.07■■□□□ 1.44
RAB5C-202ENST00000393860 GPATCH3Q96I76 525 aa24.06■■□□□ 1.44
RAB5C-202ENST00000393860 MYH3P11055 1940 aa24.06■■□□□ 1.44
RAB5C-202ENST00000393860 CTSWP56202 376 aa24.06■■□□□ 1.44
RAB5C-202ENST00000393860 TNNI3KQ59H18 835 aa24.06■■□□□ 1.44
RAB5C-202ENST00000393860 ZNF772Q68DY9 489 aaPredicted RBP24.06■■□□□ 1.44
RAB5C-202ENST00000393860 AMIGO3Q86WK7 504 aa24.06■■□□□ 1.44
RAB5C-202ENST00000393860 FPGT-TNNI3KV9GXZ4 949 aa24.06■■□□□ 1.44
RAB5C-202ENST00000393860 TRIM37O94972 964 aa24.05■■□□□ 1.44
RAB5C-202ENST00000393860 CSF1RP07333 972 aa24.05■■□□□ 1.44
RAB5C-202ENST00000393860 EYA2O00167 538 aa24.04■■□□□ 1.44
RAB5C-202ENST00000393860 GLRX3O76003 335 aaKnown RBP24.04■■□□□ 1.44
RAB5C-202ENST00000393860 RBM6P78332 1123 aaKnown RBP24.04■■□□□ 1.44
RAB5C-202ENST00000393860 RC3H1Q5TC82 1133 aaKnown RBP24.04■■□□□ 1.44
RAB5C-202ENST00000393860 FAM196AQ6ZSG2 479 aa24.04■■□□□ 1.44
RAB5C-202ENST00000393860 TTLL11Q8NHH1 800 aa24.04■■□□□ 1.44
RAB5C-202ENST00000393860 GREM2Q9H772 168 aa24.04■■□□□ 1.44
RAB5C-202ENST00000393860 SRP68Q9UHB9 627 aaKnown RBP24.04■■□□□ 1.44
RAB5C-202ENST00000393860 EP400Q96L91 3159 aa24.04■■□□□ 1.44
RAB5C-202ENST00000393860 SCN7AQ01118 1682 aa24.04■■□□□ 1.44
RAB5C-202ENST00000393860 ERC2O15083 957 aa24.04■■□□□ 1.44
RAB5C-202ENST00000393860 RPS6KA4O75676 772 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms