RNA–Protein interactions for RNA: ENST00000393572.5

FAM3A-205, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-205ENST00000393572 DPY19L2Q6NUT2 758 aa22.68■■□□□ 1.22
FAM3A-205ENST00000393572 NUTM1Q86Y26 1132 aa22.68■■□□□ 1.22
FAM3A-205ENST00000393572 C7orf43Q8WVR3 580 aa22.68■■□□□ 1.22
FAM3A-205ENST00000393572 RPGRQ92834 1020 aaKnown RBP22.68■■□□□ 1.22
FAM3A-205ENST00000393572 CHPF2Q9P2E5 772 aa22.68■■□□□ 1.22
FAM3A-205ENST00000393572 TCIRG1Q13488 830 aa22.67■■□□□ 1.22
FAM3A-205ENST00000393572 KRT24Q2M2I5 525 aa22.67■■□□□ 1.22
FAM3A-205ENST00000393572 NLRP3Q96P20 1036 aa22.67■■□□□ 1.22
FAM3A-205ENST00000393572 NMRK2Q9NPI5 230 aa22.67■■□□□ 1.22
FAM3A-205ENST00000393572 ABCC12Q96J65 1359 aa22.66■■□□□ 1.22
FAM3A-205ENST00000393572 HOXA10P31260 410 aaPredicted RBP22.66■■□□□ 1.22
FAM3A-205ENST00000393572 PLBD2Q8NHP8 589 aa22.66■■□□□ 1.22
FAM3A-205ENST00000393572 RBM17Q96I25 401 aaKnown RBP22.66■■□□□ 1.22
FAM3A-205ENST00000393572 TNRC6CQ9HCJ0 1690 aaKnown RBP22.65■■□□□ 1.22
FAM3A-205ENST00000393572 CCDC88AQ3V6T2 1871 aa22.65■■□□□ 1.22
FAM3A-205ENST00000393572 SLC10A5Q5PT55 438 aa22.65■■□□□ 1.22
FAM3A-205ENST00000393572 ANKRD13DQ6ZTN6 518 aa22.65■■□□□ 1.22
FAM3A-205ENST00000393572 RBM46Q8TBY0 533 aaKnown RBP22.65■■□□□ 1.22
FAM3A-205ENST00000393572 CACNA1SQ13698 1873 aa22.64■■□□□ 1.22
FAM3A-205ENST00000393572 HSPA6P17066 643 aa22.64■■□□□ 1.21
FAM3A-205ENST00000393572 FKBP4Q02790 459 aaKnown RBP eCLIP22.64■■□□□ 1.21
FAM3A-205ENST00000393572 CRAMP1Q96RY5 1269 aa22.64■■□□□ 1.21
FAM3A-205ENST00000393572 DICER1Q9UPY3 1922 aaKnown RBP22.64■■□□□ 1.21
FAM3A-205ENST00000393572 PRELPP51888 382 aa22.63■■□□□ 1.21
FAM3A-205ENST00000393572 CCDC184Q52MB2 194 aa22.63■■□□□ 1.21
FAM3A-205ENST00000393572 NLRP10Q86W26 655 aa22.63■■□□□ 1.21
FAM3A-205ENST00000393572 TMX4Q9H1E5 349 aaPredicted RBP22.63■■□□□ 1.21
FAM3A-205ENST00000393572 VEGFAP15692 232 aaPredicted RBP22.62■■□□□ 1.21
FAM3A-205ENST00000393572 RRAGCQ9HB90 399 aa22.62■■□□□ 1.21
FAM3A-205ENST00000393572 ANKRD36CQ5JPF3 1778 aa22.62■■□□□ 1.21
FAM3A-205ENST00000393572 TIAM2Q8IVF5 1701 aa22.62■■□□□ 1.21
FAM3A-205ENST00000393572 IL16Q14005 1332 aa22.61■■□□□ 1.21
FAM3A-205ENST00000393572 FSTL1Q12841 308 aa22.61■■□□□ 1.21
FAM3A-205ENST00000393572 CCDC30Q5VVM6 783 aa22.61■■□□□ 1.21
FAM3A-205ENST00000393572 TRMT112Q9UI30 125 aaKnown RBP22.61■■□□□ 1.21
FAM3A-205ENST00000393572 SH3TC1Q8TE82 1336 aa22.6■■□□□ 1.21
FAM3A-205ENST00000393572 GOLGA2Q08379 1002 aa22.6■■□□□ 1.21
FAM3A-205ENST00000393572 WWC1Q8IX03 1113 aa22.6■■□□□ 1.21
FAM3A-205ENST00000393572 PSMD1Q99460 953 aa22.6■■□□□ 1.21
FAM3A-205ENST00000393572 DDX58O95786 925 aaKnown RBP22.58■■□□□ 1.21
FAM3A-205ENST00000393572 HSP90B1P14625 803 aaKnown RBP22.58■■□□□ 1.21
FAM3A-205ENST00000393572 TRIM28Q13263 835 aaKnown RBP22.58■■□□□ 1.21
FAM3A-205ENST00000393572 ISCA1Q9BUE6 129 aa22.57■■□□□ 1.2
FAM3A-205ENST00000393572 ELL2O00472 640 aaPredicted RBP22.56■■□□□ 1.2
FAM3A-205ENST00000393572 PPEF1O14829 653 aaPredicted RBP22.56■■□□□ 1.2
FAM3A-205ENST00000393572 APLP1P51693 650 aa22.56■■□□□ 1.2
FAM3A-205ENST00000393572 RIC3Q7Z5B4 369 aa22.56■■□□□ 1.2
FAM3A-205ENST00000393572 SMC1BQ8NDV3 1235 aa22.56■■□□□ 1.2
FAM3A-205ENST00000393572 BBOX1O75936 387 aa22.55■■□□□ 1.2
FAM3A-205ENST00000393572 DDX46Q7L014 1031 aaKnown RBP22.55■■□□□ 1.2
FAM3A-205ENST00000393572 WDR63Q8IWG1 891 aa22.55■■□□□ 1.2
FAM3A-205ENST00000393572 SYNE4Q8N205 404 aa22.55■■□□□ 1.2
FAM3A-205ENST00000393572 C8orf58Q8NAV2 365 aa22.55■■□□□ 1.2
FAM3A-205ENST00000393572 WDR90Q96KV7 1748 aa22.54■■□□□ 1.2
FAM3A-205ENST00000393572 IARSP41252 1262 aaKnown RBP22.54■■□□□ 1.2
FAM3A-205ENST00000393572 TMC4Q7Z404 712 aa22.54■■□□□ 1.2
FAM3A-205ENST00000393572 JDP2Q8WYK2 163 aa22.54■■□□□ 1.2
FAM3A-205ENST00000393572 STK31Q9BXU1 1019 aa22.54■■□□□ 1.2
FAM3A-205ENST00000393572 VPS33BQ9H267 617 aa22.54■■□□□ 1.2
FAM3A-205ENST00000393572 ZNF277Q9NRM2 450 aaPredicted RBP22.54■■□□□ 1.2
FAM3A-205ENST00000393572 IQCA1LA6NCM1 817 aa22.53■■□□□ 1.2
FAM3A-205ENST00000393572 HCLS1P14317 486 aaPredicted RBP22.52■■□□□ 1.2
FAM3A-205ENST00000393572 C3orf67Q6ZVT6 689 aa22.52■■□□□ 1.2
FAM3A-205ENST00000393572 ATP6V0A2Q9Y487 856 aa22.52■■□□□ 1.2
FAM3A-205ENST00000393572 SNED1Q8TER0 1413 aa22.51■■□□□ 1.19
FAM3A-205ENST00000393572 OLFM4Q6UX06 510 aa22.51■■□□□ 1.19
FAM3A-205ENST00000393572 SUPT20HQ8NEM7 779 aa22.51■■□□□ 1.19
FAM3A-205ENST00000393572 ABCC4O15439 1325 aa22.51■■□□□ 1.19
FAM3A-205ENST00000393572 ATP5J2-PTCD1G3V325 749 aa22.5■■□□□ 1.19
FAM3A-205ENST00000393572 TWISTNBQ3B726 338 aaPredicted RBP22.5■■□□□ 1.19
FAM3A-205ENST00000393572 CCDC191Q8NCU4 936 aa22.5■■□□□ 1.19
FAM3A-205ENST00000393572 TSR2Q969E8 191 aaKnown RBP22.5■■□□□ 1.19
FAM3A-205ENST00000393572 L3MBTL3Q96JM7 780 aaPredicted RBP22.5■■□□□ 1.19
FAM3A-205ENST00000393572 PHAXQ9H814 394 aaKnown RBP22.5■■□□□ 1.19
FAM3A-205ENST00000393572 FZD9O00144 591 aa22.49■■□□□ 1.19
FAM3A-205ENST00000393572 GRAPQ13588 217 aa22.49■■□□□ 1.19
FAM3A-205ENST00000393572 SF3B3Q15393 1217 aaKnown RBP22.49■■□□□ 1.19
FAM3A-205ENST00000393572 SP8Q8IXZ3 490 aa22.49■■□□□ 1.19
FAM3A-205ENST00000393572 ZBTB38Q8NAP3 1195 aaPredicted RBP22.49■■□□□ 1.19
FAM3A-205ENST00000393572 GRAPLQ8TC17 118 aaPredicted RBP22.49■■□□□ 1.19
FAM3A-205ENST00000393572 DDNO94850 711 aaPredicted RBP22.48■■□□□ 1.19
FAM3A-205ENST00000393572 TSPYL6Q8N831 410 aa22.48■■□□□ 1.19
FAM3A-205ENST00000393572 FAM89AQ96GI7 184 aa22.48■■□□□ 1.19
FAM3A-205ENST00000393572 POTECB2RU33 542 aa22.47■■□□□ 1.19
FAM3A-205ENST00000393572 EIF6P56537 245 aaKnown RBP22.47■■□□□ 1.19
FAM3A-205ENST00000393572 METTL22Q9BUU2 404 aaPredicted RBP22.47■■□□□ 1.19
FAM3A-205ENST00000393572 IRS4O14654 1257 aaPredicted RBP22.46■■□□□ 1.19
FAM3A-205ENST00000393572 NEXNQ0ZGT2 675 aa22.46■■□□□ 1.19
FAM3A-205ENST00000393572 KSR2Q6VAB6 950 aa22.46■■□□□ 1.19
FAM3A-205ENST00000393572 FAM9BQ8IZU0 186 aa22.46■■□□□ 1.19
FAM3A-205ENST00000393572 GPC2Q8N158 579 aa22.46■■□□□ 1.19
FAM3A-205ENST00000393572 LARGE2Q8N3Y3 721 aa22.46■■□□□ 1.19
FAM3A-205ENST00000393572 MYD88Q99836 296 aa22.46■■□□□ 1.19
FAM3A-205ENST00000393572 CWC25Q9NXE8 425 aaPredicted RBP22.46■■□□□ 1.19
FAM3A-205ENST00000393572 CEP350Q5VT06 3117 aa22.46■■□□□ 1.19
FAM3A-205ENST00000393572 LAMB2P55268 1798 aa22.45■■□□□ 1.19
FAM3A-205ENST00000393572 SCN4AP35499 1836 aa22.45■■□□□ 1.19
FAM3A-205ENST00000393572 TCERG1O14776 1098 aaKnown RBP22.45■■□□□ 1.18
FAM3A-205ENST00000393572 DPP8Q6V1X1 898 aaPredicted RBP22.45■■□□□ 1.18
FAM3A-205ENST00000393572 RTFDC1Q9BY42 306 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms