RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 EDC4Q6P2E9 1401 aaKnown RBP17.23■□□□□ 0.35
SFXN3-202ENST00000393459 BIN1O00499 593 aa17.22■□□□□ 0.35
SFXN3-202ENST00000393459 ATP8B2P98198 1209 aa17.22■□□□□ 0.35
SFXN3-202ENST00000393459 ANKRD7Q92527 254 aa17.22■□□□□ 0.35
SFXN3-202ENST00000393459 TMEM51Q9NW97 253 aa17.22■□□□□ 0.35
SFXN3-202ENST00000393459 HYPKQ9NX55 129 aa17.22■□□□□ 0.35
SFXN3-202ENST00000393459 CYP46A1Q9Y6A2 500 aa17.22■□□□□ 0.35
SFXN3-202ENST00000393459 ROBO2Q9HCK4 1378 aa17.22■□□□□ 0.35
SFXN3-202ENST00000393459 ST3GAL1Q11201 340 aa17.22■□□□□ 0.35
SFXN3-202ENST00000393459 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
SFXN3-202ENST00000393459 BOLA2Q9H3K6 86 aa17.22■□□□□ 0.35
SFXN3-202ENST00000393459 PDE4CQ08493 712 aa17.22■□□□□ 0.35
SFXN3-202ENST00000393459 SKILP12757 684 aa17.21■□□□□ 0.35
SFXN3-202ENST00000393459 RAB11FIP4Q86YS3 637 aa17.21■□□□□ 0.35
SFXN3-202ENST00000393459 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
SFXN3-202ENST00000393459 LSG1Q9H089 658 aaKnown RBP17.21■□□□□ 0.35
SFXN3-202ENST00000393459 OGFRQ9NZT2 677 aa17.21■□□□□ 0.35
SFXN3-202ENST00000393459 SKIDA1Q1XH10 827 aa17.21■□□□□ 0.35
SFXN3-202ENST00000393459 ERCC6LQ2NKX8 1250 aa17.21■□□□□ 0.35
SFXN3-202ENST00000393459 FBXO38Q6PIJ6 1188 aa17.21■□□□□ 0.35
SFXN3-202ENST00000393459 GNAI3P08754 354 aa17.2■□□□□ 0.34
SFXN3-202ENST00000393459 AIMP1Q12904 312 aaKnown RBP17.2■□□□□ 0.34
SFXN3-202ENST00000393459 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
SFXN3-202ENST00000393459 C11orf57Q6ZUT1 292 aaPredicted RBP17.2■□□□□ 0.34
SFXN3-202ENST00000393459 OSBPL3Q9H4L5 887 aa17.2■□□□□ 0.34
SFXN3-202ENST00000393459 TBX22Q9Y458 520 aa17.2■□□□□ 0.34
SFXN3-202ENST00000393459 PTPRCP08575 1304 aa17.2■□□□□ 0.34
SFXN3-202ENST00000393459 RAD50Q92878 1312 aa17.2■□□□□ 0.34
SFXN3-202ENST00000393459 AMPHP49418 695 aa17.2■□□□□ 0.34
SFXN3-202ENST00000393459 ZNF75DP51815 510 aa17.2■□□□□ 0.34
SFXN3-202ENST00000393459 ANAPC15P60006 121 aa17.2■□□□□ 0.34
SFXN3-202ENST00000393459 PTPN14Q15678 1187 aa17.2■□□□□ 0.34
SFXN3-202ENST00000393459 H3BQV1 296 aa17.19■□□□□ 0.34
SFXN3-202ENST00000393459 GOLGA8FQ08AF8 430 aa17.19■□□□□ 0.34
SFXN3-202ENST00000393459 GOLGA8DPQ0D2H9 430 aa17.19■□□□□ 0.34
SFXN3-202ENST00000393459 IFFO2Q5TF58 517 aa17.19■□□□□ 0.34
SFXN3-202ENST00000393459 TTC14Q96N46 770 aa17.19■□□□□ 0.34
SFXN3-202ENST00000393459 MAP3K19Q56UN5 1328 aa17.19■□□□□ 0.34
SFXN3-202ENST00000393459 SLC26A8Q96RN1 970 aa17.19■□□□□ 0.34
SFXN3-202ENST00000393459 SLFNL1Q499Z3 407 aa17.18■□□□□ 0.34
SFXN3-202ENST00000393459 CHST3Q7LGC8 479 aa17.18■□□□□ 0.34
SFXN3-202ENST00000393459 RBM8AQ9Y5S9 174 aaKnown RBP17.18■□□□□ 0.34
SFXN3-202ENST00000393459 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.18■□□□□ 0.34
SFXN3-202ENST00000393459 SLFN14P0C7P3 912 aa17.18■□□□□ 0.34
SFXN3-202ENST00000393459 KIF18AQ8NI77 898 aa17.18■□□□□ 0.34
SFXN3-202ENST00000393459 PI4KAP2A4QPH2 592 aa17.17■□□□□ 0.34
SFXN3-202ENST00000393459 IFIT2P09913 472 aaKnown RBP17.17■□□□□ 0.34
SFXN3-202ENST00000393459 AACSQ86V21 672 aa17.17■□□□□ 0.34
SFXN3-202ENST00000393459 CCAR2Q8N163 923 aaKnown RBP17.17■□□□□ 0.34
SFXN3-202ENST00000393459 PI4KAP1Q8N8J0 262 aa17.17■□□□□ 0.34
SFXN3-202ENST00000393459 PI4K2BQ8TCG2 481 aa17.17■□□□□ 0.34
SFXN3-202ENST00000393459 SMTNL1A8MU46 457 aa17.17■□□□□ 0.34
SFXN3-202ENST00000393459 ZKSCAN1P17029 563 aaPredicted RBP17.17■□□□□ 0.34
SFXN3-202ENST00000393459 GYS2P54840 703 aa17.17■□□□□ 0.34
SFXN3-202ENST00000393459 CCT2P78371 535 aaKnown RBP17.17■□□□□ 0.34
SFXN3-202ENST00000393459 IRX5P78411 483 aaPredicted RBP17.17■□□□□ 0.34
SFXN3-202ENST00000393459 HOMER1Q86YM7 354 aa17.17■□□□□ 0.34
SFXN3-202ENST00000393459 NEK11Q8NG66 645 aa17.17■□□□□ 0.34
SFXN3-202ENST00000393459 ZCCHC17Q9NP64 241 aaKnown RBP17.17■□□□□ 0.34
SFXN3-202ENST00000393459 DIP2AQ14689 1571 aa17.17■□□□□ 0.34
SFXN3-202ENST00000393459 CCDC69A6NI79 296 aa17.16■□□□□ 0.34
SFXN3-202ENST00000393459 SMC2O95347 1197 aa17.16■□□□□ 0.34
SFXN3-202ENST00000393459 SYT10Q6XYQ8 523 aa17.16■□□□□ 0.34
SFXN3-202ENST00000393459 CTIFO43310 598 aaKnown RBP17.16■□□□□ 0.34
SFXN3-202ENST00000393459 CCDC129Q6ZRS4 1044 aa17.16■□□□□ 0.34
SFXN3-202ENST00000393459 PGBD1Q96JS3 809 aa17.16■□□□□ 0.34
SFXN3-202ENST00000393459 SALL3Q9BXA9 1300 aa17.16■□□□□ 0.34
SFXN3-202ENST00000393459 KCNQ3O43525 872 aa17.15■□□□□ 0.34
SFXN3-202ENST00000393459 SEC62Q99442 399 aaKnown RBP17.15■□□□□ 0.34
SFXN3-202ENST00000393459 DDX41Q9UJV9 622 aaKnown RBP17.15■□□□□ 0.34
SFXN3-202ENST00000393459 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
SFXN3-202ENST00000393459 PTPRUQ92729 1446 aa17.15■□□□□ 0.34
SFXN3-202ENST00000393459 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
SFXN3-202ENST00000393459 ZSWIM4Q9H7M6 989 aa17.15■□□□□ 0.34
SFXN3-202ENST00000393459 TLR7Q9NYK1 1049 aaKnown RBP17.15■□□□□ 0.34
SFXN3-202ENST00000393459 MAP2P11137 1827 aaKnown RBP17.15■□□□□ 0.34
SFXN3-202ENST00000393459 CCDC30Q5VVM6 783 aa17.15■□□□□ 0.34
SFXN3-202ENST00000393459 KRT222Q8N1A0 295 aa17.15■□□□□ 0.34
SFXN3-202ENST00000393459 LEO1Q8WVC0 666 aaPredicted RBP17.15■□□□□ 0.34
SFXN3-202ENST00000393459 FSD1Q9BTV5 496 aa17.15■□□□□ 0.34
SFXN3-202ENST00000393459 NMIQ13287 307 aaPredicted RBP17.14■□□□□ 0.33
SFXN3-202ENST00000393459 TERF2Q15554 542 aa17.14■□□□□ 0.33
SFXN3-202ENST00000393459 AOPEPQ8N6M6 819 aa17.14■□□□□ 0.33
SFXN3-202ENST00000393459 PRR36Q9H6K5 1346 aa17.14■□□□□ 0.33
SFXN3-202ENST00000393459 SEC31AO94979 1220 aaKnown RBP17.14■□□□□ 0.33
SFXN3-202ENST00000393459 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.33
SFXN3-202ENST00000393459 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
SFXN3-202ENST00000393459 OTUD7BQ6GQQ9 843 aa17.14■□□□□ 0.33
SFXN3-202ENST00000393459 BRF1Q92994 677 aa17.14■□□□□ 0.33
SFXN3-202ENST00000393459 CCDC34Q96HJ3 373 aa17.14■□□□□ 0.33
SFXN3-202ENST00000393459 TRIM34Q9BYJ4 488 aa17.14■□□□□ 0.33
SFXN3-202ENST00000393459 C9orf78Q9NZ63 289 aaPredicted RBP17.14■□□□□ 0.33
SFXN3-202ENST00000393459 GNL2Q13823 731 aaKnown RBP17.13■□□□□ 0.33
SFXN3-202ENST00000393459 CREB3L3Q68CJ9 461 aa17.13■□□□□ 0.33
SFXN3-202ENST00000393459 MON2Q7Z3U7 1717 aa17.13■□□□□ 0.33
SFXN3-202ENST00000393459 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.13■□□□□ 0.33
SFXN3-202ENST00000393459 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
SFXN3-202ENST00000393459 AATKQ6ZMQ8 1374 aa17.12■□□□□ 0.33
SFXN3-202ENST00000393459 RBM6P78332 1123 aaKnown RBP17.12■□□□□ 0.33
SFXN3-202ENST00000393459 BLOC1S2Q6QNY1 142 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms