RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 MFSD4BQ5TF39 518 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 ZNF513Q8N8E2 541 aaPredicted RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 ATP2A3Q93084 1043 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 TRIM55Q9BYV6 548 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 TAOK3Q9H2K8 898 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 C6orf203Q9P0P8 240 aaPredicted RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 MKRN1Q9UHC7 482 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 ZNF711Q9Y462 761 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 PPME1Q9Y570 386 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 HNRNPCL2B2RXH8 293 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 HNRNPCL1O60812 293 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 XBP1P17861 261 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 RASIP1Q5U651 963 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 TCERG1LQ5VWI1 586 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 DZIP1LQ8IYY4 767 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 SREK1Q8WXA9 508 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 N4BP2L2Q92802 583 aaPredicted RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 MRGBPQ9NV56 204 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 KRT85P78386 507 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 MAP3K9P80192 1104 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.74□□□□□ -1.81
PHF3-202ENST00000393387 TEX11Q8IYF3 940 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 TTC12Q9H892 705 aaPredicted RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 SPINK5Q9NQ38 1064 aaPredicted RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 TMA7Q9Y2S6 64 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 NUTM2FA1L443 756 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 NDC80O14777 642 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 OPA1O60313 960 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 MGEA5O60502 916 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 PTGS1P23219 599 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 LONP1P36776 959 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 UTP14CQ5TAP6 766 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 BTN2A1Q7KYR7 527 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 RNF10Q8N5U6 811 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 PRIMPOLQ96LW4 560 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 ALS2CR12Q96Q35 445 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 EFCC1Q9HA90 598 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 CCDC196A0A1B0GTZ2 297 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 CTAGE15A4D2H0 777 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 FGFR1OPO95684 399 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 CTAGE8P0CG41 777 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 PSMA5P28066 241 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 PHEXP78562 749 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 IL1RL1Q01638 556 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 CFAP157Q5JU67 520 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 SYT10Q6XYQ8 523 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 TRMT1LQ7Z2T5 733 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 CTAGE4Q8IX94 777 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 CEP70Q8NHQ1 597 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 MGARPQ8TDB4 240 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 YIPF3Q9GZM5 350 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 STMN4Q9H169 189 aaPredicted RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.74□□□□□ -1.81
PHF3-202ENST00000393387 HSPA1LP34931 641 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 G3BP1Q13283 466 aaKnown RBP eCLIP3.74□□□□□ -1.81
PHF3-202ENST00000393387 MPP4Q96JB8 637 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 CALR3Q96L12 384 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 ARIH1Q9Y4X5 557 aaPredicted RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 WDR33Q9C0J8 1336 aaKnown RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 TPD52L2O43399 206 aaKnown RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 OAS2P29728 719 aaKnown RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 CKAP4Q07065 602 aaKnown RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 NMIQ13287 307 aaPredicted RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 CCDC65Q8IXS2 484 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 TMEM57Q8N5G2 664 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 ANKRD24Q8TF21 1146 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 PDRG1Q9NUG6 133 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 ROCK2O75116 1388 aaKnown RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 GOLGA6BA6NDN3 693 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 DCAF8L1A6NGE4 600 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 NDUFAB1O14561 156 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 NBNO60934 754 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 CLCN1P35523 988 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 FOXD4Q12950 439 aaPredicted RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 CCDC183Q5T5S1 534 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 HDGFL2Q7Z4V5 671 aaPredicted RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 GPIHBP1Q8IV16 184 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 CCDC83Q8IWF9 413 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 JPH2Q9BR39 696 aaPredicted RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 NAA15Q9BXJ9 866 aaKnown RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 GIMAP4Q9NUV9 329 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 PAXBP1Q9Y5B6 917 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 E7EVH7 732 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 SERPINI2O75830 405 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 FCHSD2O94868 740 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 APOEP02649 317 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 CCDC159P0C7I6 412 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 CASTP20810 708 aaKnown RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 AIMP1Q12904 312 aaKnown RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 ZSCAN23Q3MJ62 389 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 TRIML2Q8N7C3 387 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 TRIML1Q8N9V2 468 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 MCUR1Q96AQ8 359 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 TRIM7Q9C029 511 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 DDX19BQ9UMR2 479 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 NINLQ9Y2I6 1382 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 YEATS4O95619 227 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 S100BP04271 92 aaPredicted RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 RNASE9P60153 205 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 996 ms