RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 H7C1W4 665 aa30.97■■■□□ 2.55
SMARCD3-203ENST00000392811 NOL8Q76FK4 1167 aaKnown RBP30.97■■■□□ 2.55
SMARCD3-203ENST00000392811 BTG4Q9NY30 223 aa30.97■■■□□ 2.55
SMARCD3-203ENST00000392811 TMOD3Q9NYL9 352 aa30.97■■■□□ 2.55
SMARCD3-203ENST00000392811 SKOR2Q2VWA4 1001 aaPredicted RBP30.96■■■□□ 2.55
SMARCD3-203ENST00000392811 GOLGA6L22H0YM25 854 aa30.95■■■□□ 2.55
SMARCD3-203ENST00000392811 RASEFQ8IZ41 740 aa30.95■■■□□ 2.55
SMARCD3-203ENST00000392811 IL27Q8NEV9 243 aa30.95■■■□□ 2.55
SMARCD3-203ENST00000392811 BOLA2Q9H3K6 86 aa30.95■■■□□ 2.55
SMARCD3-203ENST00000392811 CWC25Q9NXE8 425 aaPredicted RBP30.95■■■□□ 2.55
SMARCD3-203ENST00000392811 ZBTB3Q9H5J0 574 aa30.95■■■□□ 2.54
SMARCD3-203ENST00000392811 TJP1Q07157 1748 aa30.94■■■□□ 2.54
SMARCD3-203ENST00000392811 FOXO4P98177 505 aa30.94■■■□□ 2.54
SMARCD3-203ENST00000392811 PTH1RQ03431 593 aa30.94■■■□□ 2.54
SMARCD3-203ENST00000392811 TFCP2Q12800 502 aa30.94■■■□□ 2.54
SMARCD3-203ENST00000392811 L1TD1Q5T7N2 865 aaKnown RBP30.94■■■□□ 2.54
SMARCD3-203ENST00000392811 LMBR1LQ6UX01 489 aa30.94■■■□□ 2.54
SMARCD3-203ENST00000392811 ZDHHC9Q9Y397 364 aa30.94■■■□□ 2.54
SMARCD3-203ENST00000392811 FSD2A1L4K1 749 aa30.93■■■□□ 2.54
SMARCD3-203ENST00000392811 TNNI3KQ59H18 835 aa30.93■■■□□ 2.54
SMARCD3-203ENST00000392811 FPGT-TNNI3KV9GXZ4 949 aa30.93■■■□□ 2.54
SMARCD3-203ENST00000392811 HIP1O00291 1037 aa30.92■■■□□ 2.54
SMARCD3-203ENST00000392811 INTS4Q96HW7 963 aaKnown RBP30.92■■■□□ 2.54
SMARCD3-203ENST00000392811 GOLGA6L3A6NEY3 463 aa30.91■■■□□ 2.54
SMARCD3-203ENST00000392811 NMIQ13287 307 aaPredicted RBP30.91■■■□□ 2.54
SMARCD3-203ENST00000392811 FAM227BQ96M60 508 aa30.91■■■□□ 2.54
SMARCD3-203ENST00000392811 DBNLQ9UJU6 430 aaKnown RBP30.91■■■□□ 2.54
SMARCD3-203ENST00000392811 CCDC191Q8NCU4 936 aa30.9■■■□□ 2.54
SMARCD3-203ENST00000392811 PIGBQ92521 554 aa30.89■■■□□ 2.54
SMARCD3-203ENST00000392811 TTC14Q96N46 770 aa30.89■■■□□ 2.54
SMARCD3-203ENST00000392811 FSD1Q9BTV5 496 aa30.89■■■□□ 2.54
SMARCD3-203ENST00000392811 ASAP1Q9ULH1 1129 aa30.89■■■□□ 2.54
SMARCD3-203ENST00000392811 COL14A1Q05707 1796 aaKnown RBP30.89■■■□□ 2.53
SMARCD3-203ENST00000392811 MCTP1Q6DN14 999 aa30.88■■■□□ 2.53
SMARCD3-203ENST00000392811 CHMP3Q9Y3E7 222 aa30.88■■■□□ 2.53
SMARCD3-203ENST00000392811 CCDC171Q6TFL3 1326 aa30.88■■■□□ 2.53
SMARCD3-203ENST00000392811 ATP5JP18859 108 aa30.87■■■□□ 2.53
SMARCD3-203ENST00000392811 DISP2A7MBM2 1401 aa30.87■■■□□ 2.53
SMARCD3-203ENST00000392811 KCNB2Q92953 911 aa30.86■■■□□ 2.53
SMARCD3-203ENST00000392811 SNRKQ9NRH2 765 aa30.86■■■□□ 2.53
SMARCD3-203ENST00000392811 PRPF40BQ6NWY9 871 aaKnown RBP30.86■■■□□ 2.53
SMARCD3-203ENST00000392811 ARXQ96QS3 562 aa30.85■■■□□ 2.53
SMARCD3-203ENST00000392811 ROBO1Q9Y6N7 1651 aa30.85■■■□□ 2.53
SMARCD3-203ENST00000392811 A0A0D9SFI3 127 aa30.85■■■□□ 2.53
SMARCD3-203ENST00000392811 DNAJC10Q8IXB1 793 aa30.85■■■□□ 2.53
SMARCD3-203ENST00000392811 ATG3Q9NT62 314 aa30.85■■■□□ 2.53
SMARCD3-203ENST00000392811 ITGB4P16144 1822 aa30.84■■■□□ 2.53
SMARCD3-203ENST00000392811 NECTIN1Q15223 517 aa30.84■■■□□ 2.53
SMARCD3-203ENST00000392811 VSIG10Q8N0Z9 540 aa30.84■■■□□ 2.53
SMARCD3-203ENST00000392811 EDC3Q96F86 508 aaKnown RBP30.84■■■□□ 2.53
SMARCD3-203ENST00000392811 DBNDD2Q9BQY9 259 aa30.84■■■□□ 2.53
SMARCD3-203ENST00000392811 AK2P54819 239 aa30.83■■■□□ 2.53
SMARCD3-203ENST00000392811 TEX13AQ9BXU3 409 aaPredicted RBP30.83■■■□□ 2.53
SMARCD3-203ENST00000392811 CASTP20810 708 aaKnown RBP30.83■■■□□ 2.53
SMARCD3-203ENST00000392811 ISCA1Q9BUE6 129 aa30.83■■■□□ 2.53
SMARCD3-203ENST00000392811 RBM8AQ9Y5S9 174 aaKnown RBP30.83■■■□□ 2.53
SMARCD3-203ENST00000392811 ATG9AQ7Z3C6 839 aa30.82■■■□□ 2.52
SMARCD3-203ENST00000392811 MAP4K1Q92918 833 aa30.82■■■□□ 2.52
SMARCD3-203ENST00000392811 ZNF330Q9Y3S2 320 aaPredicted RBP30.82■■■□□ 2.52
SMARCD3-203ENST00000392811 BRD1O95696 1058 aa30.81■■■□□ 2.52
SMARCD3-203ENST00000392811 CPA1P15085 419 aa30.81■■■□□ 2.52
SMARCD3-203ENST00000392811 KLHL40Q2TBA0 621 aa30.81■■■□□ 2.52
SMARCD3-203ENST00000392811 ADCK5Q3MIX3 580 aa30.81■■■□□ 2.52
SMARCD3-203ENST00000392811 LMBRD1Q9NUN5 540 aa30.81■■■□□ 2.52
SMARCD3-203ENST00000392811 DDX49Q9Y6V7 483 aaKnown RBP30.81■■■□□ 2.52
SMARCD3-203ENST00000392811 MED23Q9ULK4 1368 aa30.81■■■□□ 2.52
SMARCD3-203ENST00000392811 XRCC6P12956 609 aaKnown RBP eCLIP30.81■■■□□ 2.52
SMARCD3-203ENST00000392811 RUFY3Q7L099 469 aa30.81■■■□□ 2.52
SMARCD3-203ENST00000392811 JAKMIP1Q96N16 626 aaKnown RBP30.81■■■□□ 2.52
SMARCD3-203ENST00000392811 COL16A1Q07092 1604 aaPredicted RBP30.81■■■□□ 2.52
SMARCD3-203ENST00000392811 TCIRG1Q13488 830 aa30.8■■■□□ 2.52
SMARCD3-203ENST00000392811 TM6SF1Q9BZW5 370 aa30.8■■■□□ 2.52
SMARCD3-203ENST00000392811 COL22A1Q8NFW1 1626 aaPredicted RBP30.8■■■□□ 2.52
SMARCD3-203ENST00000392811 FOXD4L5Q5VV16 416 aaPredicted RBP30.8■■■□□ 2.52
SMARCD3-203ENST00000392811 FOXD4L4Q8WXT5 416 aaPredicted RBP30.8■■■□□ 2.52
SMARCD3-203ENST00000392811 LIMCH1Q9UPQ0 1083 aa30.8■■■□□ 2.52
SMARCD3-203ENST00000392811 AHDC1Q5TGY3 1603 aaPredicted RBP30.79■■■□□ 2.52
SMARCD3-203ENST00000392811 CREB3L3Q68CJ9 461 aa30.79■■■□□ 2.52
SMARCD3-203ENST00000392811 KCNJ4P48050 445 aa30.78■■■□□ 2.52
SMARCD3-203ENST00000392811 ZSWIM6Q9HCJ5 1215 aa30.78■■■□□ 2.52
SMARCD3-203ENST00000392811 PLCH1Q4KWH8 1693 aa30.78■■■□□ 2.52
SMARCD3-203ENST00000392811 STARD3NLO95772 234 aa30.78■■■□□ 2.52
SMARCD3-203ENST00000392811 NDUFB9Q9Y6M9 179 aa30.78■■■□□ 2.52
SMARCD3-203ENST00000392811 ZKSCAN1P17029 563 aaPredicted RBP30.77■■■□□ 2.52
SMARCD3-203ENST00000392811 KIF6Q6ZMV9 814 aa30.77■■■□□ 2.52
SMARCD3-203ENST00000392811 HAUS7Q99871 368 aa30.77■■■□□ 2.52
SMARCD3-203ENST00000392811 LARP6Q9BRS8 491 aaKnown RBP30.77■■■□□ 2.52
SMARCD3-203ENST00000392811 BCL9O00512 1426 aa30.76■■■□□ 2.52
SMARCD3-203ENST00000392811 IL15P40933 162 aaPredicted RBP30.76■■■□□ 2.52
SMARCD3-203ENST00000392811 CHAMP1Q96JM3 812 aa30.76■■■□□ 2.52
SMARCD3-203ENST00000392811 ISY1Q9ULR0 285 aaKnown RBP30.76■■■□□ 2.52
SMARCD3-203ENST00000392811 VPS53Q5VIR6 699 aa30.76■■■□□ 2.51
SMARCD3-203ENST00000392811 ZNF589Q86UQ0 364 aaPredicted RBP30.76■■■□□ 2.51
SMARCD3-203ENST00000392811 ZNF594Q96JF6 807 aaPredicted RBP30.76■■■□□ 2.51
SMARCD3-203ENST00000392811 DNAJC2Q99543 621 aaKnown RBP30.76■■■□□ 2.51
SMARCD3-203ENST00000392811 PDRG1Q9NUG6 133 aa30.76■■■□□ 2.51
SMARCD3-203ENST00000392811 CYP46A1Q9Y6A2 500 aa30.76■■■□□ 2.51
SMARCD3-203ENST00000392811 TRIM28Q13263 835 aaKnown RBP30.75■■■□□ 2.51
SMARCD3-203ENST00000392811 GPR108Q9NPR9 543 aa30.75■■■□□ 2.51
SMARCD3-203ENST00000392811 JCADQ9P266 1359 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms