RNA–Protein interactions for RNA: ENST00000390398.3

TRBV25-1-202, Transcript of T cell receptor beta variable 25-1, humanhuman

APPRIS P1 BASIC

Gene TRBV25-1, Length 381 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1-202ENST00000390398 PPP1R42Q7Z4L9 355 aa9.07□□□□□ -0.96
TRBV25-1-202ENST00000390398 NPM2Q86SE8 214 aaKnown RBP9.07□□□□□ -0.96
TRBV25-1-202ENST00000390398 NLRP10Q86W26 655 aa9.07□□□□□ -0.96
TRBV25-1-202ENST00000390398 ZNF34Q8IZ26 560 aa9.07□□□□□ -0.96
TRBV25-1-202ENST00000390398 SSH3Q8TE77 659 aa9.07□□□□□ -0.96
TRBV25-1-202ENST00000390398 BICC1Q9H694 974 aaKnown RBP9.07□□□□□ -0.96
TRBV25-1-202ENST00000390398 COL24A1Q17RW2 1714 aa9.07□□□□□ -0.96
TRBV25-1-202ENST00000390398 DDX60Q8IY21 1712 aaKnown RBP9.07□□□□□ -0.96
TRBV25-1-202ENST00000390398 UBN2Q6ZU65 1347 aa9.06□□□□□ -0.96
TRBV25-1-202ENST00000390398 HMMRO75330 724 aa9.06□□□□□ -0.96
TRBV25-1-202ENST00000390398 NUCB1Q02818 461 aa9.06□□□□□ -0.96
TRBV25-1-202ENST00000390398 RABL6Q3YEC7 729 aaPredicted RBP9.06□□□□□ -0.96
TRBV25-1-202ENST00000390398 POTEDQ86YR6 584 aa9.06□□□□□ -0.96
TRBV25-1-202ENST00000390398 BCL2L12Q9HB09 334 aa9.06□□□□□ -0.96
TRBV25-1-202ENST00000390398 HDAC5Q9UQL6 1122 aa9.06□□□□□ -0.96
TRBV25-1-202ENST00000390398 RTCBQ9Y3I0 505 aaKnown RBP9.06□□□□□ -0.96
TRBV25-1-202ENST00000390398 RGL2O15211 777 aa9.05□□□□□ -0.96
TRBV25-1-202ENST00000390398 SRGAP3O43295 1099 aa9.05□□□□□ -0.96
TRBV25-1-202ENST00000390398 PCCAP05165 728 aaPredicted RBP9.05□□□□□ -0.96
TRBV25-1-202ENST00000390398 PDE4AP27815 886 aa9.05□□□□□ -0.96
TRBV25-1-202ENST00000390398 FOXO4P98177 505 aa9.05□□□□□ -0.96
TRBV25-1-202ENST00000390398 RTL5Q5HYW3 569 aaPredicted RBP9.05□□□□□ -0.96
TRBV25-1-202ENST00000390398 ZBTB38Q8NAP3 1195 aaPredicted RBP9.05□□□□□ -0.96
TRBV25-1-202ENST00000390398 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
TRBV25-1-202ENST00000390398 AK7Q96M32 723 aa9.05□□□□□ -0.96
TRBV25-1-202ENST00000390398 SRP68Q9UHB9 627 aaKnown RBP9.05□□□□□ -0.96
TRBV25-1-202ENST00000390398 NARFQ9UHQ1 456 aa9.05□□□□□ -0.96
TRBV25-1-202ENST00000390398 PHF14O94880 888 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 RGS3P49796 1198 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 ANKRD45Q5TZF3 282 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 SUSD4Q5VX71 490 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 USPL1Q5W0Q7 1092 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 CLEC4GQ6UXB4 293 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 CHD1LQ86WJ1 897 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 SYNE4Q8N205 404 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 FAM89AQ96GI7 184 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 LNPKQ9C0E8 428 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 EXOC6BQ9Y2D4 811 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 CDHR2Q9BYE9 1310 aa9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 USP42Q9H9J4 1324 aaKnown RBP9.04□□□□□ -0.96
TRBV25-1-202ENST00000390398 QSER1Q2KHR3 1735 aa9.03□□□□□ -0.96
TRBV25-1-202ENST00000390398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.03□□□□□ -0.96
TRBV25-1-202ENST00000390398 RFX5P48382 616 aaPredicted RBP9.03□□□□□ -0.96
TRBV25-1-202ENST00000390398 ZNF827Q17R98 1081 aa9.03□□□□□ -0.96
TRBV25-1-202ENST00000390398 TRAPPC3LQ5T215 181 aa9.03□□□□□ -0.96
TRBV25-1-202ENST00000390398 PELP1Q8IZL8 1130 aaKnown RBP9.03□□□□□ -0.96
TRBV25-1-202ENST00000390398 AKT1S1Q96B36 256 aa9.03□□□□□ -0.96
TRBV25-1-202ENST00000390398 PLA2G12BQ9BX93 195 aa9.03□□□□□ -0.96
TRBV25-1-202ENST00000390398 NIP7Q9Y221 180 aaKnown RBP eCLIP9.03□□□□□ -0.96
TRBV25-1-202ENST00000390398 ZNF652Q9Y2D9 606 aa9.03□□□□□ -0.96
TRBV25-1-202ENST00000390398 NOP58Q9Y2X3 529 aaKnown RBP9.03□□□□□ -0.96
TRBV25-1-202ENST00000390398 APBB1O00213 710 aa9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 SMARCA5O60264 1052 aaPredicted RBP9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 ZPR1O75312 459 aa9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 SURF6O75683 361 aaKnown RBP9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 NTSR2O95665 410 aa9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 SSFA2P28290 1259 aa9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 RFC4P35249 363 aa9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 PARP10Q53GL7 1025 aa9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 TBC1D9BQ66K14 1250 aa9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 LMBR1LQ6UX01 489 aa9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 CAMKK2Q96RR4 588 aa9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 UTP14AQ9BVJ6 771 aaKnown RBP9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 TRMT112Q9UI30 125 aaKnown RBP9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 PA2G4Q9UQ80 394 aaKnown RBP9.02□□□□□ -0.97
TRBV25-1-202ENST00000390398 SPEF2Q9C093 1822 aa9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 FAM177BA6PVY3 158 aa9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 IRS4O14654 1257 aaPredicted RBP9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 CSF1RP07333 972 aa9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 TAF1P21675 1872 aa9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 HMGB2P26583 209 aaKnown RBP9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 EN1Q05925 392 aaPredicted RBP9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 MAPK8IP2Q13387 824 aaPredicted RBP9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 EZH2Q15910 746 aaKnown RBP9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 C16orf71Q8IYS4 520 aaPredicted RBP9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 KLHDC4Q8TBB5 520 aa9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 SH3TC1Q8TE82 1336 aa9.01□□□□□ -0.97
TRBV25-1-202ENST00000390398 RAB11FIP3O75154 756 aa9□□□□□ -0.97
TRBV25-1-202ENST00000390398 PTPN12Q05209 780 aaKnown RBP9□□□□□ -0.97
TRBV25-1-202ENST00000390398 BICDL1Q6ZP65 573 aa9□□□□□ -0.97
TRBV25-1-202ENST00000390398 OTUD7AQ8TE49 926 aaPredicted RBP9□□□□□ -0.97
TRBV25-1-202ENST00000390398 LRRCC1Q9C099 1032 aa9□□□□□ -0.97
TRBV25-1-202ENST00000390398 COPRSQ9NQ92 184 aa9□□□□□ -0.97
TRBV25-1-202ENST00000390398 TNRC6CQ9HCJ0 1690 aaKnown RBP9□□□□□ -0.97
TRBV25-1-202ENST00000390398 PDE8AO60658 829 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 SASH1O94885 1247 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 GYS1P13807 737 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 HCLS1P14317 486 aaPredicted RBP8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 CTSWP56202 376 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 NFIXQ14938 502 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 FAM161AQ3B820 660 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 HSP90AB4PQ58FF6 505 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 DEFB132Q7Z7B7 95 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 COL23A1Q86Y22 540 aaPredicted RBP8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 NUTM1Q86Y26 1132 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 PLEKHM2Q8IWE5 1019 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 TTLL11Q8NHH1 800 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 RHPN1Q8TCX5 695 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 SETDB2Q96T68 719 aa8.99□□□□□ -0.97
TRBV25-1-202ENST00000390398 CHMP3Q9Y3E7 222 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms