RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CC2D1BQ5T0F9 858 aaKnown RBP12.97□□□□□ -0.33
IFT88-203ENST00000389373 NUTM1Q86Y26 1132 aa12.97□□□□□ -0.33
IFT88-203ENST00000389373 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
IFT88-203ENST00000389373 RPGRQ92834 1020 aaKnown RBP12.97□□□□□ -0.33
IFT88-203ENST00000389373 CA12O43570 354 aa12.96□□□□□ -0.33
IFT88-203ENST00000389373 CC2D2BQ6DHV5 1058 aa12.96□□□□□ -0.33
IFT88-203ENST00000389373 CIAPIN1Q6FI81 312 aa12.96□□□□□ -0.33
IFT88-203ENST00000389373 GLIS2Q9BZE0 524 aaPredicted RBP12.96□□□□□ -0.33
IFT88-203ENST00000389373 TIMELESSQ9UNS1 1208 aa12.96□□□□□ -0.33
IFT88-203ENST00000389373 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
IFT88-203ENST00000389373 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
IFT88-203ENST00000389373 SAPCD2Q86UD0 394 aa12.95□□□□□ -0.34
IFT88-203ENST00000389373 SLC51AQ86UW1 340 aa12.95□□□□□ -0.34
IFT88-203ENST00000389373 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
IFT88-203ENST00000389373 ADARB2Q9NS39 739 aaKnown RBP12.95□□□□□ -0.34
IFT88-203ENST00000389373 LTBP1Q14766 1721 aa12.94□□□□□ -0.34
IFT88-203ENST00000389373 COL4A5P29400 1685 aa12.94□□□□□ -0.34
IFT88-203ENST00000389373 PPIP5K2O43314 1243 aa12.94□□□□□ -0.34
IFT88-203ENST00000389373 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
IFT88-203ENST00000389373 AOC3Q16853 763 aa12.94□□□□□ -0.34
IFT88-203ENST00000389373 NYXQ9GZU5 481 aa12.94□□□□□ -0.34
IFT88-203ENST00000389373 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
IFT88-203ENST00000389373 PPEF1O14829 653 aaPredicted RBP12.93□□□□□ -0.34
IFT88-203ENST00000389373 SOX10P56693 466 aa12.93□□□□□ -0.34
IFT88-203ENST00000389373 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
IFT88-203ENST00000389373 RBM17Q96I25 401 aaKnown RBP12.93□□□□□ -0.34
IFT88-203ENST00000389373 PHACTR3Q96KR7 559 aa12.93□□□□□ -0.34
IFT88-203ENST00000389373 TMX4Q9H1E5 349 aaPredicted RBP12.93□□□□□ -0.34
IFT88-203ENST00000389373 GPRC5DQ9NZD1 345 aa12.93□□□□□ -0.34
IFT88-203ENST00000389373 THSD7BQ9C0I4 1608 aa12.92□□□□□ -0.34
IFT88-203ENST00000389373 GPTP24298 496 aa12.92□□□□□ -0.34
IFT88-203ENST00000389373 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
IFT88-203ENST00000389373 CRY2Q49AN0 593 aa12.92□□□□□ -0.34
IFT88-203ENST00000389373 MCM10Q7L590 875 aa12.92□□□□□ -0.34
IFT88-203ENST00000389373 ZIC5Q96T25 663 aa12.92□□□□□ -0.34
IFT88-203ENST00000389373 BCL2L13Q9BXK5 485 aa12.92□□□□□ -0.34
IFT88-203ENST00000389373 CASP8AP2Q9UKL3 1982 aa12.92□□□□□ -0.34
IFT88-203ENST00000389373 ABCC12Q96J65 1359 aa12.92□□□□□ -0.34
IFT88-203ENST00000389373 GMPSP49915 693 aaPredicted RBP12.91□□□□□ -0.34
IFT88-203ENST00000389373 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
IFT88-203ENST00000389373 GRIPAP1Q4V328 841 aa12.91□□□□□ -0.34
IFT88-203ENST00000389373 CEMIPQ8WUJ3 1361 aa12.91□□□□□ -0.34
IFT88-203ENST00000389373 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
IFT88-203ENST00000389373 HUNKP57058 714 aa12.9□□□□□ -0.34
IFT88-203ENST00000389373 CXCL9Q07325 125 aa12.9□□□□□ -0.34
IFT88-203ENST00000389373 USP48Q86UV5 1035 aa12.9□□□□□ -0.34
IFT88-203ENST00000389373 HHIPL1Q96JK4 782 aa12.9□□□□□ -0.34
IFT88-203ENST00000389373 PCGF6Q9BYE7 350 aa12.9□□□□□ -0.34
IFT88-203ENST00000389373 RRP7AQ9Y3A4 280 aaKnown RBP12.9□□□□□ -0.34
IFT88-203ENST00000389373 TRPM7Q96QT4 1865 aa12.9□□□□□ -0.34
IFT88-203ENST00000389373 NPC1L1Q9UHC9 1359 aa12.9□□□□□ -0.34
IFT88-203ENST00000389373 RAD17O75943 681 aa12.89□□□□□ -0.35
IFT88-203ENST00000389373 HOXA10P31260 410 aaPredicted RBP12.89□□□□□ -0.35
IFT88-203ENST00000389373 NOGQ13253 232 aa12.89□□□□□ -0.35
IFT88-203ENST00000389373 SUSD4Q5VX71 490 aa12.89□□□□□ -0.35
IFT88-203ENST00000389373 DLK2Q6UY11 383 aa12.89□□□□□ -0.35
IFT88-203ENST00000389373 CDC37L1Q7L3B6 337 aa12.89□□□□□ -0.35
IFT88-203ENST00000389373 CRAMP1Q96RY5 1269 aa12.89□□□□□ -0.35
IFT88-203ENST00000389373 MIS18AQ9NYP9 233 aa12.89□□□□□ -0.35
IFT88-203ENST00000389373 ZNRF3Q9ULT6 936 aa12.89□□□□□ -0.35
IFT88-203ENST00000389373 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
IFT88-203ENST00000389373 RGL2O15211 777 aa12.88□□□□□ -0.35
IFT88-203ENST00000389373 MYL6BP14649 208 aa12.88□□□□□ -0.35
IFT88-203ENST00000389373 HIRAP54198 1017 aaPredicted RBP12.88□□□□□ -0.35
IFT88-203ENST00000389373 KIF6Q6ZMV9 814 aa12.88□□□□□ -0.35
IFT88-203ENST00000389373 TTLL7Q6ZT98 887 aa12.88□□□□□ -0.35
IFT88-203ENST00000389373 TRPM4Q8TD43 1214 aa12.88□□□□□ -0.35
IFT88-203ENST00000389373 ZBTB3Q9H5J0 574 aa12.88□□□□□ -0.35
IFT88-203ENST00000389373 ERVV-1B6SEH8 477 aa12.87□□□□□ -0.35
IFT88-203ENST00000389373 TNIP1Q15025 636 aa12.87□□□□□ -0.35
IFT88-203ENST00000389373 C3orf67Q6ZVT6 689 aa12.87□□□□□ -0.35
IFT88-203ENST00000389373 SUPT20HQ8NEM7 779 aa12.87□□□□□ -0.35
IFT88-203ENST00000389373 NLRP3Q96P20 1036 aa12.87□□□□□ -0.35
IFT88-203ENST00000389373 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
IFT88-203ENST00000389373 PGAP2Q9UHJ9 254 aa12.87□□□□□ -0.35
IFT88-203ENST00000389373 CNOT7Q9UIV1 285 aaKnown RBP12.87□□□□□ -0.35
IFT88-203ENST00000389373 KIF7Q2M1P5 1343 aa12.87□□□□□ -0.35
IFT88-203ENST00000389373 MAP3K15Q6ZN16 1313 aa12.87□□□□□ -0.35
IFT88-203ENST00000389373 SHTN1A0MZ66 631 aa12.86□□□□□ -0.35
IFT88-203ENST00000389373 H7C1D1 291 aa12.86□□□□□ -0.35
IFT88-203ENST00000389373 PER1O15534 1290 aaPredicted RBP12.86□□□□□ -0.35
IFT88-203ENST00000389373 TRPA1O75762 1119 aa12.86□□□□□ -0.35
IFT88-203ENST00000389373 KIF23Q02241 960 aaPredicted RBP12.86□□□□□ -0.35
IFT88-203ENST00000389373 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
IFT88-203ENST00000389373 ZC3H15Q8WU90 426 aaKnown RBP12.86□□□□□ -0.35
IFT88-203ENST00000389373 VPS33BQ9H267 617 aa12.86□□□□□ -0.35
IFT88-203ENST00000389373 ATP6V0A2Q9Y487 856 aa12.86□□□□□ -0.35
IFT88-203ENST00000389373 UBN2Q6ZU65 1347 aa12.86□□□□□ -0.35
IFT88-203ENST00000389373 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
IFT88-203ENST00000389373 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
IFT88-203ENST00000389373 TAF7Q15545 349 aaPredicted RBP12.85□□□□□ -0.35
IFT88-203ENST00000389373 RGMBQ6NW40 437 aa12.85□□□□□ -0.35
IFT88-203ENST00000389373 PPP1R42Q7Z4L9 355 aa12.85□□□□□ -0.35
IFT88-203ENST00000389373 MPNDQ8N594 471 aa12.85□□□□□ -0.35
IFT88-203ENST00000389373 C2orf69Q8N8R5 385 aa12.85□□□□□ -0.35
IFT88-203ENST00000389373 CFAP53Q96M91 514 aa12.85□□□□□ -0.35
IFT88-203ENST00000389373 NUDCQ9Y266 331 aa12.85□□□□□ -0.35
IFT88-203ENST00000389373 NTSR2O95665 410 aa12.84□□□□□ -0.35
IFT88-203ENST00000389373 ZNF157P51786 506 aaPredicted RBP12.84□□□□□ -0.35
IFT88-203ENST00000389373 TRIM26Q12899 539 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms