RNA–Protein interactions for RNA: ENST00000381998.8

MSR1-204, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-204ENST00000381998 PPP4R3BQ5MIZ7 849 aa7.36□□□□□ -1.23
MSR1-204ENST00000381998 TTC13Q8NBP0 860 aa7.36□□□□□ -1.23
MSR1-204ENST00000381998 PROCA1Q8NCQ7 364 aaPredicted RBP7.36□□□□□ -1.23
MSR1-204ENST00000381998 GAS2L2Q8NHY3 880 aa7.36□□□□□ -1.23
MSR1-204ENST00000381998 VTI1AQ96AJ9 217 aa7.36□□□□□ -1.23
MSR1-204ENST00000381998 GCC1Q96CN9 775 aa7.36□□□□□ -1.23
MSR1-204ENST00000381998 COG3Q96JB2 828 aa7.36□□□□□ -1.23
MSR1-204ENST00000381998 GBP4Q96PP9 640 aa7.36□□□□□ -1.23
MSR1-204ENST00000381998 NAP1L2Q9ULW6 460 aaPredicted RBP7.36□□□□□ -1.23
MSR1-204ENST00000381998 GNEQ9Y223 722 aaKnown RBP7.36□□□□□ -1.23
MSR1-204ENST00000381998 CDK12Q9NYV4 1490 aaPredicted RBP7.35□□□□□ -1.23
MSR1-204ENST00000381998 PIK3R4Q99570 1358 aa7.35□□□□□ -1.23
MSR1-204ENST00000381998 ESPNB1AK53 854 aa7.35□□□□□ -1.23
MSR1-204ENST00000381998 K7ELQ4 463 aaPredicted RBP7.35□□□□□ -1.23
MSR1-204ENST00000381998 HSP90AA1P07900 732 aaKnown RBP7.35□□□□□ -1.23
MSR1-204ENST00000381998 VARS2Q5ST30 1063 aaKnown RBP7.35□□□□□ -1.23
MSR1-204ENST00000381998 ISY1Q9ULR0 285 aaKnown RBP7.35□□□□□ -1.23
MSR1-204ENST00000381998 PTCH1Q13635 1447 aa7.35□□□□□ -1.23
MSR1-204ENST00000381998 CREB3O43889 395 aa7.35□□□□□ -1.23
MSR1-204ENST00000381998 PARNO95453 639 aaKnown RBP7.35□□□□□ -1.23
MSR1-204ENST00000381998 SSFA2P28290 1259 aa7.35□□□□□ -1.23
MSR1-204ENST00000381998 CEBPAP49715 358 aaPredicted RBP7.35□□□□□ -1.23
MSR1-204ENST00000381998 LHX8Q68G74 356 aa7.35□□□□□ -1.23
MSR1-204ENST00000381998 VRTNQ9H8Y1 702 aa7.35□□□□□ -1.23
MSR1-204ENST00000381998 ZSWIM6Q9HCJ5 1215 aa7.35□□□□□ -1.23
MSR1-204ENST00000381998 FAM217BQ9NTX9 383 aaPredicted RBP7.35□□□□□ -1.23
MSR1-204ENST00000381998 MAP2P11137 1827 aaKnown RBP7.35□□□□□ -1.23
MSR1-204ENST00000381998 ABCC4O15439 1325 aa7.34□□□□□ -1.23
MSR1-204ENST00000381998 ST18O60284 1047 aa7.34□□□□□ -1.23
MSR1-204ENST00000381998 GSPT1P15170 499 aaKnown RBP7.34□□□□□ -1.23
MSR1-204ENST00000381998 MAMSTRQ6ZN01 415 aa7.34□□□□□ -1.23
MSR1-204ENST00000381998 GLMNQ92990 594 aa7.34□□□□□ -1.23
MSR1-204ENST00000381998 MBIPQ9NS73 344 aa7.34□□□□□ -1.23
MSR1-204ENST00000381998 SEPT9Q9UHD8 586 aaPredicted RBP7.34□□□□□ -1.23
MSR1-204ENST00000381998 MON2Q7Z3U7 1717 aa7.34□□□□□ -1.23
MSR1-204ENST00000381998 PLEKHG1Q9ULL1 1385 aa7.34□□□□□ -1.23
MSR1-204ENST00000381998 CCDC194A0A1B0GVG4 234 aa7.34□□□□□ -1.23
MSR1-204ENST00000381998 SPDYE5A6NIY4 337 aa7.34□□□□□ -1.23
MSR1-204ENST00000381998 FOXD4Q12950 439 aaPredicted RBP7.34□□□□□ -1.23
MSR1-204ENST00000381998 ARHGAP45Q92619 1136 aa7.34□□□□□ -1.23
MSR1-204ENST00000381998 C3P01024 1663 aa7.34□□□□□ -1.23
MSR1-204ENST00000381998 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.34□□□□□ -1.24
MSR1-204ENST00000381998 POTEB3A0JP26 581 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 RCCD1A6NED2 376 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 ZNF853P0CG23 659 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 POTEBQ6S5H4 581 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 NOP9Q86U38 636 aaKnown RBP7.33□□□□□ -1.24
MSR1-204ENST00000381998 LARGE2Q8N3Y3 721 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 PTPRUQ92729 1446 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 TTC21BQ7Z4L5 1316 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 AKAP12Q02952 1782 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 PTPREP23469 700 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 DMRTA1Q5VZB9 504 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 C8orf58Q8NAV2 365 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 SLC26A8Q96RN1 970 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 TMA7Q9Y2S6 64 aaKnown RBP7.33□□□□□ -1.24
MSR1-204ENST00000381998 ACEP12821 1306 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 CDC45O75419 566 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 SKOR2Q2VWA4 1001 aaPredicted RBP7.33□□□□□ -1.24
MSR1-204ENST00000381998 TWISTNBQ3B726 338 aaPredicted RBP7.33□□□□□ -1.24
MSR1-204ENST00000381998 SH3D19Q5HYK7 790 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 GIPC2Q8TF65 315 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 EYA1Q99502 592 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 MTA3Q9BTC8 594 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 IFT57Q9NWB7 429 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 PNMA3Q9UL41 463 aa7.33□□□□□ -1.24
MSR1-204ENST00000381998 FAM83GA6ND36 823 aa7.32□□□□□ -1.24
MSR1-204ENST00000381998 EIF3JO75822 258 aaKnown RBP7.32□□□□□ -1.24
MSR1-204ENST00000381998 GNAI1P63096 354 aa7.32□□□□□ -1.24
MSR1-204ENST00000381998 PLEKHM2Q8IWE5 1019 aa7.32□□□□□ -1.24
MSR1-204ENST00000381998 RPS6KL1Q9Y6S9 549 aa7.32□□□□□ -1.24
MSR1-204ENST00000381998 CALD1Q05682 793 aaKnown RBP7.32□□□□□ -1.24
MSR1-204ENST00000381998 NOM1Q5C9Z4 860 aaKnown RBP7.32□□□□□ -1.24
MSR1-204ENST00000381998 ZFYVE27Q5T4F4 411 aa7.32□□□□□ -1.24
MSR1-204ENST00000381998 C16orf71Q8IYS4 520 aaPredicted RBP7.32□□□□□ -1.24
MSR1-204ENST00000381998 OTUD7AQ8TE49 926 aaPredicted RBP7.32□□□□□ -1.24
MSR1-204ENST00000381998 PMM1Q92871 262 aa7.32□□□□□ -1.24
MSR1-204ENST00000381998 TRIM44Q96DX7 344 aaPredicted RBP7.32□□□□□ -1.24
MSR1-204ENST00000381998 ITSN1Q15811 1721 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 BAG4O95429 457 aaKnown RBP7.31□□□□□ -1.24
MSR1-204ENST00000381998 RFX1P22670 979 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 PKP1Q13835 747 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 DCTN1Q14203 1278 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 EIF4A2Q14240 407 aaKnown RBP7.31□□□□□ -1.24
MSR1-204ENST00000381998 KRBA2Q6ZNG9 492 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 CLEC17AQ6ZS10 378 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 CHMP4BQ9H444 224 aaKnown RBP7.31□□□□□ -1.24
MSR1-204ENST00000381998 OVOS2A0A0J9YW53 1432 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 OVOS2Q6IE36 1432 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 NRKQ7Z2Y5 1582 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 FAM205CA6NFA0 338 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 PPP1R3GB7ZBB8 358 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 IGBP1P78318 339 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 PSME1Q06323 249 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 EID1Q9Y6B2 187 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 USP6P35125 1406 aa7.31□□□□□ -1.24
MSR1-204ENST00000381998 TOPAZ1Q8N9V7 1692 aa7.3□□□□□ -1.24
MSR1-204ENST00000381998 hCG_2014768A0A024R1R8 64 aa7.3□□□□□ -1.24
MSR1-204ENST00000381998 SH3BP5O60239 455 aa7.3□□□□□ -1.24
MSR1-204ENST00000381998 NASPP49321 788 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms