RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 MRFAP1L1Q96HT8 127 aa17.66■□□□□ 0.42
CTNS-202ENST00000381870 CYP46A1Q9Y6A2 500 aa17.66■□□□□ 0.42
CTNS-202ENST00000381870 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
CTNS-202ENST00000381870 POLR3GO15318 223 aaPredicted RBP17.65■□□□□ 0.42
CTNS-202ENST00000381870 TAF7LQ5H9L4 462 aa17.65■□□□□ 0.42
CTNS-202ENST00000381870 SARM1Q6SZW1 724 aa17.65■□□□□ 0.42
CTNS-202ENST00000381870 ZSWIM6Q9HCJ5 1215 aa17.65■□□□□ 0.42
CTNS-202ENST00000381870 PIK3C2BO00750 1634 aa17.65■□□□□ 0.42
CTNS-202ENST00000381870 RNF20Q5VTR2 975 aa17.65■□□□□ 0.42
CTNS-202ENST00000381870 SCAND2PQ9GZW5 306 aaPredicted RBP17.65■□□□□ 0.42
CTNS-202ENST00000381870 HECW2Q9P2P5 1572 aa17.65■□□□□ 0.42
CTNS-202ENST00000381870 A0A087WWV3 80 aa17.64■□□□□ 0.42
CTNS-202ENST00000381870 NFATC2IPQ8NCF5 419 aa17.64■□□□□ 0.42
CTNS-202ENST00000381870 SIGLEC1Q9BZZ2 1709 aa17.64■□□□□ 0.41
CTNS-202ENST00000381870 CNTROBQ8N137 903 aa17.64■□□□□ 0.41
CTNS-202ENST00000381870 L2HGDHQ9H9P8 463 aa17.64■□□□□ 0.41
CTNS-202ENST00000381870 ATP7BP35670 1465 aa17.63■□□□□ 0.41
CTNS-202ENST00000381870 HTATSF1O43719 755 aaKnown RBP17.63■□□□□ 0.41
CTNS-202ENST00000381870 SNW1Q13573 536 aaKnown RBP17.63■□□□□ 0.41
CTNS-202ENST00000381870 ARHGAP29Q52LW3 1261 aa17.63■□□□□ 0.41
CTNS-202ENST00000381870 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
CTNS-202ENST00000381870 AATKQ6ZMQ8 1374 aa17.63■□□□□ 0.41
CTNS-202ENST00000381870 LARP1Q6PKG0 1096 aaKnown RBP17.63■□□□□ 0.41
CTNS-202ENST00000381870 SYT10Q6XYQ8 523 aa17.63■□□□□ 0.41
CTNS-202ENST00000381870 ZBTB9Q96C00 473 aa17.63■□□□□ 0.41
CTNS-202ENST00000381870 SURF6O75683 361 aaKnown RBP17.62■□□□□ 0.41
CTNS-202ENST00000381870 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
CTNS-202ENST00000381870 NECTIN2Q92692 538 aa17.62■□□□□ 0.41
CTNS-202ENST00000381870 CRB1P82279 1406 aa17.62■□□□□ 0.41
CTNS-202ENST00000381870 ST5P78524 1137 aa17.62■□□□□ 0.41
CTNS-202ENST00000381870 TSPYL4Q9UJ04 414 aa17.62■□□□□ 0.41
CTNS-202ENST00000381870 FLIIQ13045 1269 aa17.61■□□□□ 0.41
CTNS-202ENST00000381870 CCDC93Q567U6 631 aa17.61■□□□□ 0.41
CTNS-202ENST00000381870 RHPN1Q8TCX5 695 aa17.61■□□□□ 0.41
CTNS-202ENST00000381870 ZFP91Q96JP5 570 aaPredicted RBP17.61■□□□□ 0.41
CTNS-202ENST00000381870 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
CTNS-202ENST00000381870 ZRANB2O95218 330 aaKnown RBP eCLIP17.61■□□□□ 0.41
CTNS-202ENST00000381870 EIF4A2Q14240 407 aaKnown RBP17.61■□□□□ 0.41
CTNS-202ENST00000381870 E4F1Q66K89 784 aaPredicted RBP17.61■□□□□ 0.41
CTNS-202ENST00000381870 WAPLQ7Z5K2 1190 aa17.61■□□□□ 0.41
CTNS-202ENST00000381870 TCEANC2Q96MN5 208 aa17.61■□□□□ 0.41
CTNS-202ENST00000381870 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
CTNS-202ENST00000381870 IRX3P78415 501 aaPredicted RBP17.6■□□□□ 0.41
CTNS-202ENST00000381870 KRBA2Q6ZNG9 492 aa17.6■□□□□ 0.41
CTNS-202ENST00000381870 SMARCE1Q969G3 411 aa17.6■□□□□ 0.41
CTNS-202ENST00000381870 COG3Q96JB2 828 aa17.6■□□□□ 0.41
CTNS-202ENST00000381870 TM6SF1Q9BZW5 370 aa17.6■□□□□ 0.41
CTNS-202ENST00000381870 KCND1Q9NSA2 647 aa17.6■□□□□ 0.41
CTNS-202ENST00000381870 KIF2AO00139 706 aaPredicted RBP17.6■□□□□ 0.41
CTNS-202ENST00000381870 CAVIN2O95810 425 aa17.6■□□□□ 0.41
CTNS-202ENST00000381870 PDCP20941 246 aa17.6■□□□□ 0.41
CTNS-202ENST00000381870 GORABQ5T7V8 394 aa17.6■□□□□ 0.41
CTNS-202ENST00000381870 PPP1R13BQ96KQ4 1090 aa17.6■□□□□ 0.41
CTNS-202ENST00000381870 USP44Q9H0E7 712 aa17.6■□□□□ 0.41
CTNS-202ENST00000381870 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.6■□□□□ 0.41
CTNS-202ENST00000381870 BECN2A8MW95 431 aa17.59■□□□□ 0.41
CTNS-202ENST00000381870 FOXO3O43524 673 aa17.59■□□□□ 0.41
CTNS-202ENST00000381870 RAB11FIP3O75154 756 aa17.59■□□□□ 0.41
CTNS-202ENST00000381870 DHX40Q8IX18 779 aaKnown RBP17.59■□□□□ 0.41
CTNS-202ENST00000381870 SSH3Q8TE77 659 aa17.59■□□□□ 0.41
CTNS-202ENST00000381870 STK31Q9BXU1 1019 aa17.59■□□□□ 0.41
CTNS-202ENST00000381870 ZCCHC17Q9NP64 241 aaKnown RBP17.59■□□□□ 0.41
CTNS-202ENST00000381870 RSPH14Q9UHP6 348 aa17.59■□□□□ 0.41
CTNS-202ENST00000381870 DIP2CQ9Y2E4 1556 aa17.59■□□□□ 0.41
CTNS-202ENST00000381870 SEC31AO94979 1220 aaKnown RBP17.59■□□□□ 0.41
CTNS-202ENST00000381870 TEX35Q5T0J7 233 aa17.59■□□□□ 0.41
CTNS-202ENST00000381870 PAXIP1Q6ZW49 1069 aaPredicted RBP17.59■□□□□ 0.41
CTNS-202ENST00000381870 PPP1R42Q7Z4L9 355 aa17.59■□□□□ 0.41
CTNS-202ENST00000381870 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.41
CTNS-202ENST00000381870 TMCO3Q6UWJ1 677 aa17.58■□□□□ 0.41
CTNS-202ENST00000381870 TNNT3P45378 269 aaPredicted RBP17.58■□□□□ 0.4
CTNS-202ENST00000381870 STX1AQ16623 288 aa17.58■□□□□ 0.4
CTNS-202ENST00000381870 TXLNBQ8N3L3 684 aa17.58■□□□□ 0.4
CTNS-202ENST00000381870 LCMT1Q9UIC8 334 aa17.58■□□□□ 0.4
CTNS-202ENST00000381870 ADCY9O60503 1353 aa17.57■□□□□ 0.4
CTNS-202ENST00000381870 TRIM66O15016 1216 aa17.57■□□□□ 0.4
CTNS-202ENST00000381870 STK3Q13188 491 aa17.57■□□□□ 0.4
CTNS-202ENST00000381870 NECTIN1Q15223 517 aa17.57■□□□□ 0.4
CTNS-202ENST00000381870 MUM1L1Q5H9M0 696 aa17.57■□□□□ 0.4
CTNS-202ENST00000381870 NBPF11Q86T75 865 aa17.57■□□□□ 0.4
CTNS-202ENST00000381870 KCNB2Q92953 911 aa17.57■□□□□ 0.4
CTNS-202ENST00000381870 FBXW7Q969H0 707 aa17.57■□□□□ 0.4
CTNS-202ENST00000381870 EDC4Q6P2E9 1401 aaKnown RBP17.57■□□□□ 0.4
CTNS-202ENST00000381870 TPM4P67936 248 aa17.57■□□□□ 0.4
CTNS-202ENST00000381870 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
CTNS-202ENST00000381870 DDX11Q96FC9 970 aa17.57■□□□□ 0.4
CTNS-202ENST00000381870 RASSF4Q9H2L5 321 aa17.57■□□□□ 0.4
CTNS-202ENST00000381870 ORC3Q9UBD5 711 aaPredicted RBP17.57■□□□□ 0.4
CTNS-202ENST00000381870 IFIT2P09913 472 aaKnown RBP17.56■□□□□ 0.4
CTNS-202ENST00000381870 ZKSCAN1P17029 563 aaPredicted RBP17.56■□□□□ 0.4
CTNS-202ENST00000381870 CREB3L3Q68CJ9 461 aa17.56■□□□□ 0.4
CTNS-202ENST00000381870 C10orf67Q8IYJ2 551 aa17.56■□□□□ 0.4
CTNS-202ENST00000381870 ERCC4Q92889 916 aaPredicted RBP17.56■□□□□ 0.4
CTNS-202ENST00000381870 RBM8AQ9Y5S9 174 aaKnown RBP17.56■□□□□ 0.4
CTNS-202ENST00000381870 NCKAP5LQ9HCH0 1330 aa17.55■□□□□ 0.4
CTNS-202ENST00000381870 AOPEPQ8N6M6 819 aa17.55■□□□□ 0.4
CTNS-202ENST00000381870 TMX1Q9H3N1 280 aa17.55■□□□□ 0.4
CTNS-202ENST00000381870 ARHGEF10O15013 1369 aa17.55■□□□□ 0.4
CTNS-202ENST00000381870 ADGRL3Q9HAR2 1447 aa17.55■□□□□ 0.4
CTNS-202ENST00000381870 CPS1P31327 1500 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms