RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 UTP14AQ9BVJ6 771 aaKnown RBP24.79■■□□□ 1.56
GTF3A-201ENST00000381140 ADCY9O60503 1353 aa24.78■■□□□ 1.56
GTF3A-201ENST00000381140 ABCC12Q96J65 1359 aa24.78■■□□□ 1.56
GTF3A-201ENST00000381140 NTSR2O95665 410 aa24.78■■□□□ 1.56
GTF3A-201ENST00000381140 BCS1LQ9Y276 419 aa24.78■■□□□ 1.56
GTF3A-201ENST00000381140 IBTKQ9P2D0 1353 aaPredicted RBP24.77■■□□□ 1.56
GTF3A-201ENST00000381140 KCNA3P22001 575 aa24.77■■□□□ 1.56
GTF3A-201ENST00000381140 ISCA1Q9BUE6 129 aa24.77■■□□□ 1.56
GTF3A-201ENST00000381140 BCL2L13Q9BXK5 485 aa24.77■■□□□ 1.56
GTF3A-201ENST00000381140 PIM2Q9P1W9 311 aa24.77■■□□□ 1.56
GTF3A-201ENST00000381140 ZNF622Q969S3 477 aaKnown RBP eCLIP24.76■■□□□ 1.55
GTF3A-201ENST00000381140 METTL22Q9BUU2 404 aaPredicted RBP24.76■■□□□ 1.55
GTF3A-201ENST00000381140 TRMT112Q9UI30 125 aaKnown RBP24.76■■□□□ 1.55
GTF3A-201ENST00000381140 ARFGEF1Q9Y6D6 1849 aa24.75■■□□□ 1.55
GTF3A-201ENST00000381140 LAMB2P55268 1798 aa24.74■■□□□ 1.55
GTF3A-201ENST00000381140 RTL5Q5HYW3 569 aaPredicted RBP24.74■■□□□ 1.55
GTF3A-201ENST00000381140 SSH1Q8WYL5 1049 aa24.74■■□□□ 1.55
GTF3A-201ENST00000381140 NEXNQ0ZGT2 675 aa24.73■■□□□ 1.55
GTF3A-201ENST00000381140 DALRD3Q5D0E6 543 aaKnown RBP24.73■■□□□ 1.55
GTF3A-201ENST00000381140 SYNE4Q8N205 404 aa24.73■■□□□ 1.55
GTF3A-201ENST00000381140 SMC4Q9NTJ3 1288 aa24.73■■□□□ 1.55
GTF3A-201ENST00000381140 CHD4Q14839 1912 aa24.73■■□□□ 1.55
GTF3A-201ENST00000381140 CENPBP07199 599 aaPredicted RBP24.72■■□□□ 1.55
GTF3A-201ENST00000381140 MRPL50Q8N5N7 158 aaKnown RBP24.72■■□□□ 1.55
GTF3A-201ENST00000381140 SH3TC1Q8TE82 1336 aa24.72■■□□□ 1.55
GTF3A-201ENST00000381140 DDX60Q8IY21 1712 aaKnown RBP24.71■■□□□ 1.55
GTF3A-201ENST00000381140 F6X3S4 739 aa24.71■■□□□ 1.55
GTF3A-201ENST00000381140 DNAAF4Q8WXU2 420 aa24.71■■□□□ 1.55
GTF3A-201ENST00000381140 PDZRN3Q9UPQ7 1066 aa24.71■■□□□ 1.55
GTF3A-201ENST00000381140 CT47B1P0C2W7 299 aaPredicted RBP24.7■■□□□ 1.55
GTF3A-201ENST00000381140 HCLS1P14317 486 aaPredicted RBP24.7■■□□□ 1.55
GTF3A-201ENST00000381140 FAM89AQ96GI7 184 aa24.7■■□□□ 1.55
GTF3A-201ENST00000381140 CWC25Q9NXE8 425 aaPredicted RBP24.7■■□□□ 1.55
GTF3A-201ENST00000381140 SLX4Q8IY92 1834 aa24.7■■□□□ 1.54
GTF3A-201ENST00000381140 GRIN3BO60391 1043 aa24.69■■□□□ 1.54
GTF3A-201ENST00000381140 SRGNP10124 158 aa24.69■■□□□ 1.54
GTF3A-201ENST00000381140 TRIM28Q13263 835 aaKnown RBP24.69■■□□□ 1.54
GTF3A-201ENST00000381140 RNF123Q5XPI4 1314 aa24.69■■□□□ 1.54
GTF3A-201ENST00000381140 IGKV5-2P06315 115 aa24.68■■□□□ 1.54
GTF3A-201ENST00000381140 CWF19L2Q2TBE0 894 aaKnown RBP24.68■■□□□ 1.54
GTF3A-201ENST00000381140 ALDH1L2Q3SY69 923 aa24.68■■□□□ 1.54
GTF3A-201ENST00000381140 TTLL6Q8N841 843 aa24.68■■□□□ 1.54
GTF3A-201ENST00000381140 CCDC191Q8NCU4 936 aa24.68■■□□□ 1.54
GTF3A-201ENST00000381140 JARID2Q92833 1246 aaPredicted RBP24.68■■□□□ 1.54
GTF3A-201ENST00000381140 MASTLQ96GX5 879 aa24.68■■□□□ 1.54
GTF3A-201ENST00000381140 ZNF219Q9P2Y4 722 aaPredicted RBP24.68■■□□□ 1.54
GTF3A-201ENST00000381140 C3orf67Q6ZVT6 689 aa24.67■■□□□ 1.54
GTF3A-201ENST00000381140 RPGRQ92834 1020 aaKnown RBP24.67■■□□□ 1.54
GTF3A-201ENST00000381140 RIC1Q4ADV7 1423 aa24.67■■□□□ 1.54
GTF3A-201ENST00000381140 NPR1P16066 1061 aa24.67■■□□□ 1.54
GTF3A-201ENST00000381140 STYK1Q6J9G0 422 aa24.67■■□□□ 1.54
GTF3A-201ENST00000381140 SLC4A10Q6U841 1118 aa24.67■■□□□ 1.54
GTF3A-201ENST00000381140 NLRP3Q96P20 1036 aa24.67■■□□□ 1.54
GTF3A-201ENST00000381140 GOLGB1Q14789 3259 aaKnown RBP24.66■■□□□ 1.54
GTF3A-201ENST00000381140 NEURL1BA8MQ27 555 aa24.66■■□□□ 1.54
GTF3A-201ENST00000381140 SLC10A5Q5PT55 438 aa24.66■■□□□ 1.54
GTF3A-201ENST00000381140 TAF1P21675 1872 aa24.65■■□□□ 1.54
GTF3A-201ENST00000381140 KLRG2A4D1S0 409 aaPredicted RBP24.65■■□□□ 1.54
GTF3A-201ENST00000381140 ARHGAP27Q6ZUM4 889 aa24.65■■□□□ 1.54
GTF3A-201ENST00000381140 ZBTB38Q8NAP3 1195 aaPredicted RBP24.65■■□□□ 1.54
GTF3A-201ENST00000381140 CNKSR1Q969H4 720 aa24.65■■□□□ 1.54
GTF3A-201ENST00000381140 MYH3P11055 1940 aa24.64■■□□□ 1.54
GTF3A-201ENST00000381140 IRS4O14654 1257 aaPredicted RBP24.64■■□□□ 1.53
GTF3A-201ENST00000381140 RARSP54136 660 aaKnown RBP24.64■■□□□ 1.53
GTF3A-201ENST00000381140 PCCAP05165 728 aaPredicted RBP24.63■■□□□ 1.53
GTF3A-201ENST00000381140 CRY2Q49AN0 593 aa24.63■■□□□ 1.53
GTF3A-201ENST00000381140 PRPF40BQ6NWY9 871 aaKnown RBP24.63■■□□□ 1.53
GTF3A-201ENST00000381140 LINS1Q8NG48 757 aa24.63■■□□□ 1.53
GTF3A-201ENST00000381140 PTPRCP08575 1304 aa24.63■■□□□ 1.53
GTF3A-201ENST00000381140 C21orf2O43822 256 aa24.61■■□□□ 1.53
GTF3A-201ENST00000381140 CCDC88AQ3V6T2 1871 aa24.6■■□□□ 1.53
GTF3A-201ENST00000381140 GCKRQ14397 625 aa24.6■■□□□ 1.53
GTF3A-201ENST00000381140 BEND3Q5T5X7 828 aa24.6■■□□□ 1.53
GTF3A-201ENST00000381140 UBE3BQ7Z3V4 1068 aa24.6■■□□□ 1.53
GTF3A-201ENST00000381140 RBM17Q96I25 401 aaKnown RBP24.6■■□□□ 1.53
GTF3A-201ENST00000381140 NOB1Q9ULX3 412 aaKnown RBP24.6■■□□□ 1.53
GTF3A-201ENST00000381140 ALDH1B1P30837 517 aa24.59■■□□□ 1.53
GTF3A-201ENST00000381140 BCAR3O75815 825 aa24.57■■□□□ 1.52
GTF3A-201ENST00000381140 SRCIN1Q9C0H9 1055 aa24.57■■□□□ 1.52
GTF3A-201ENST00000381140 SBF1O95248 1867 aa24.57■■□□□ 1.52
GTF3A-201ENST00000381140 FER1L6Q2WGJ9 1857 aa24.57■■□□□ 1.52
GTF3A-201ENST00000381140 HSP90B1P14625 803 aaKnown RBP24.56■■□□□ 1.52
GTF3A-201ENST00000381140 HOXA10P31260 410 aaPredicted RBP24.56■■□□□ 1.52
GTF3A-201ENST00000381140 CCDC85AQ96PX6 553 aaPredicted RBP24.56■■□□□ 1.52
GTF3A-201ENST00000381140 KIF16BQ96L93 1317 aa24.56■■□□□ 1.52
GTF3A-201ENST00000381140 CDHR2Q9BYE9 1310 aa24.56■■□□□ 1.52
GTF3A-201ENST00000381140 H7C1W4 665 aa24.55■■□□□ 1.52
GTF3A-201ENST00000381140 PDE8AO60658 829 aa24.55■■□□□ 1.52
GTF3A-201ENST00000381140 DDX46Q7L014 1031 aaKnown RBP24.55■■□□□ 1.52
GTF3A-201ENST00000381140 FRAT1Q92837 279 aaPredicted RBP24.55■■□□□ 1.52
GTF3A-201ENST00000381140 CRAMP1Q96RY5 1269 aa24.55■■□□□ 1.52
GTF3A-201ENST00000381140 ABCC4O15439 1325 aa24.55■■□□□ 1.52
GTF3A-201ENST00000381140 OLFM4Q6UX06 510 aa24.54■■□□□ 1.52
GTF3A-201ENST00000381140 SPEF2Q9C093 1822 aa24.54■■□□□ 1.52
GTF3A-201ENST00000381140 ALDH1L1O75891 902 aa24.54■■□□□ 1.52
GTF3A-201ENST00000381140 BRPF1P55201 1214 aaPredicted RBP24.54■■□□□ 1.52
GTF3A-201ENST00000381140 RASSF7Q02833 373 aa24.54■■□□□ 1.52
GTF3A-201ENST00000381140 SF3B3Q15393 1217 aaKnown RBP24.54■■□□□ 1.52
GTF3A-201ENST00000381140 API5Q9BZZ5 524 aaKnown RBP24.54■■□□□ 1.52
GTF3A-201ENST00000381140 C9orf78Q9NZ63 289 aaPredicted RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms