RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 PLBD2Q8NHP8 589 aa15.21■□□□□ 0.03
PUDP-201ENST00000381077 GPT2Q8TD30 523 aa15.21■□□□□ 0.03
PUDP-201ENST00000381077 HMG20BQ9P0W2 317 aa15.21■□□□□ 0.03
PUDP-201ENST00000381077 PA2G4Q9UQ80 394 aaKnown RBP15.21■□□□□ 0.03
PUDP-201ENST00000381077 PCDH11XQ9BZA7 1347 aa15.21■□□□□ 0.03
PUDP-201ENST00000381077 PCDH11YQ9BZA8 1340 aa15.21■□□□□ 0.03
PUDP-201ENST00000381077 ERVV-2B6SEH9 535 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 AK2P54819 239 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 SLC39A6Q13433 755 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 TSGA10IPQ3SY00 556 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 LRSAM1Q6UWE0 723 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 CYP46A1Q9Y6A2 500 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 PAPPAQ13219 1627 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 NCLP19338 710 aaKnown RBP15.2■□□□□ 0.02
PUDP-201ENST00000381077 CABP4P57796 275 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 ANKRD1Q15327 319 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 CSPP1Q1MSJ5 1256 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 MYD88Q99836 296 aa15.2■□□□□ 0.02
PUDP-201ENST00000381077 RPAP1Q9BWH6 1393 aaPredicted RBP15.19■□□□□ 0.02
PUDP-201ENST00000381077 MED23Q9ULK4 1368 aa15.19■□□□□ 0.02
PUDP-201ENST00000381077 ATP5JP18859 108 aa15.19■□□□□ 0.02
PUDP-201ENST00000381077 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
PUDP-201ENST00000381077 RRAGDQ9NQL2 400 aaPredicted RBP15.19■□□□□ 0.02
PUDP-201ENST00000381077 WDR17Q8IZU2 1322 aa15.19■□□□□ 0.02
PUDP-201ENST00000381077 RUFY3Q7L099 469 aa15.19■□□□□ 0.02
PUDP-201ENST00000381077 ARXQ96QS3 562 aa15.19■□□□□ 0.02
PUDP-201ENST00000381077 ESPNB1AK53 854 aa15.18■□□□□ 0.02
PUDP-201ENST00000381077 CASTP20810 708 aaKnown RBP15.18■□□□□ 0.02
PUDP-201ENST00000381077 RFX5P48382 616 aaPredicted RBP15.18■□□□□ 0.02
PUDP-201ENST00000381077 PDRG1Q9NUG6 133 aa15.18■□□□□ 0.02
PUDP-201ENST00000381077 ZSCAN22P10073 491 aaPredicted RBP15.17■□□□□ 0.02
PUDP-201ENST00000381077 MYL6BP14649 208 aa15.17■□□□□ 0.02
PUDP-201ENST00000381077 KRT32Q14532 448 aa15.17■□□□□ 0.02
PUDP-201ENST00000381077 GPR108Q9NPR9 543 aa15.17■□□□□ 0.02
PUDP-201ENST00000381077 SMC3Q9UQE7 1217 aa15.17■□□□□ 0.02
PUDP-201ENST00000381077 USP16Q9Y5T5 823 aa15.17■□□□□ 0.02
PUDP-201ENST00000381077 XIRP1Q702N8 1843 aaKnown RBP15.17■□□□□ 0.02
PUDP-201ENST00000381077 LETM1O95202 739 aaPredicted RBP15.17■□□□□ 0.02
PUDP-201ENST00000381077 RBM8AQ9Y5S9 174 aaKnown RBP15.17■□□□□ 0.02
PUDP-201ENST00000381077 NUP188Q5SRE5 1749 aa15.16■□□□□ 0.02
PUDP-201ENST00000381077 STX6O43752 255 aa15.16■□□□□ 0.02
PUDP-201ENST00000381077 CASP7P55210 303 aa15.16■□□□□ 0.02
PUDP-201ENST00000381077 PTH1RQ03431 593 aa15.16■□□□□ 0.02
PUDP-201ENST00000381077 PTPN12Q05209 780 aaKnown RBP15.16■□□□□ 0.02
PUDP-201ENST00000381077 CREB3L3Q68CJ9 461 aa15.16■□□□□ 0.02
PUDP-201ENST00000381077 JAKMIP1Q96N16 626 aaKnown RBP15.16■□□□□ 0.02
PUDP-201ENST00000381077 ATG3Q9NT62 314 aa15.16■□□□□ 0.02
PUDP-201ENST00000381077 USPL1Q5W0Q7 1092 aa15.16■□□□□ 0.02
PUDP-201ENST00000381077 PRPF40BQ6NWY9 871 aaKnown RBP15.16■□□□□ 0.02
PUDP-201ENST00000381077 PDLIM2Q96JY6 352 aa15.16■□□□□ 0.02
PUDP-201ENST00000381077 FSD1Q9BTV5 496 aa15.16■□□□□ 0.02
PUDP-201ENST00000381077 TMEM63CQ9P1W3 806 aa15.16■□□□□ 0.02
PUDP-201ENST00000381077 SOS2Q07890 1332 aaPredicted RBP15.16■□□□□ 0.02
PUDP-201ENST00000381077 NMIQ13287 307 aaPredicted RBP15.15■□□□□ 0.02
PUDP-201ENST00000381077 TNNI3KQ59H18 835 aa15.15■□□□□ 0.02
PUDP-201ENST00000381077 FPGT-TNNI3KV9GXZ4 949 aa15.15■□□□□ 0.02
PUDP-201ENST00000381077 TNS2Q63HR2 1409 aa15.15■□□□□ 0.02
PUDP-201ENST00000381077 SPEF2Q9C093 1822 aa15.15■□□□□ 0.02
PUDP-201ENST00000381077 COL5A2P05997 1499 aaPredicted RBP15.14■□□□□ 0.01
PUDP-201ENST00000381077 H7C1W4 665 aa15.14■□□□□ 0.01
PUDP-201ENST00000381077 PDCP20941 246 aa15.14■□□□□ 0.01
PUDP-201ENST00000381077 FAM184AQ8NB25 1140 aa15.14■□□□□ 0.01
PUDP-201ENST00000381077 ZCRB1Q8TBF4 217 aaKnown RBP15.14■□□□□ 0.01
PUDP-201ENST00000381077 CCDC8Q9H0W5 538 aaPredicted RBP15.14■□□□□ 0.01
PUDP-201ENST00000381077 KCPQ6ZWJ8 1503 aa15.14■□□□□ 0.01
PUDP-201ENST00000381077 F13A1P00488 732 aa15.14■□□□□ 0.01
PUDP-201ENST00000381077 SYT1P21579 422 aa15.14■□□□□ 0.01
PUDP-201ENST00000381077 FBXO3Q9UK99 471 aa15.14■□□□□ 0.01
PUDP-201ENST00000381077 A0A087WZG4 1122 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 SLC27A2O14975 620 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 KCNJ4P48050 445 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 PRIM1P49642 420 aaKnown RBP15.13■□□□□ 0.01
PUDP-201ENST00000381077 UBE2HP62256 183 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 EPHA10Q5JZY3 1008 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 BRINP3Q76B58 766 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 NOL8Q76FK4 1167 aaKnown RBP15.13■□□□□ 0.01
PUDP-201ENST00000381077 CARD10Q9BWT7 1032 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 CHRNA2Q15822 529 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 BLOC1S2Q6QNY1 142 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 CCDC191Q8NCU4 936 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 HAUS7Q99871 368 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 BOLA2Q9H3K6 86 aa15.13■□□□□ 0.01
PUDP-201ENST00000381077 ABCA3Q99758 1704 aa15.12■□□□□ 0.01
PUDP-201ENST00000381077 PALLDQ8WX93 1383 aa15.12■□□□□ 0.01
PUDP-201ENST00000381077 UBE3BQ7Z3V4 1068 aa15.12■□□□□ 0.01
PUDP-201ENST00000381077 FAM227BQ96M60 508 aa15.12■□□□□ 0.01
PUDP-201ENST00000381077 RBSNQ9H1K0 784 aa15.12■□□□□ 0.01
PUDP-201ENST00000381077 CWC25Q9NXE8 425 aaPredicted RBP15.12■□□□□ 0.01
PUDP-201ENST00000381077 ADCK5Q3MIX3 580 aa15.11■□□□□ 0.01
PUDP-201ENST00000381077 USP48Q86UV5 1035 aa15.11■□□□□ 0.01
PUDP-201ENST00000381077 ZSCAN30Q86W11 494 aa15.11■□□□□ 0.01
PUDP-201ENST00000381077 CABLES1Q8TDN4 633 aa15.11■□□□□ 0.01
PUDP-201ENST00000381077 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.11■□□□□ 0.01
PUDP-201ENST00000381077 SIL1Q9H173 461 aa15.11■□□□□ 0.01
PUDP-201ENST00000381077 PRDM11Q9NQV5 511 aa15.11■□□□□ 0.01
PUDP-201ENST00000381077 TLR7Q9NYK1 1049 aaKnown RBP15.11■□□□□ 0.01
PUDP-201ENST00000381077 DBNLQ9UJU6 430 aaKnown RBP15.11■□□□□ 0.01
PUDP-201ENST00000381077 U3KPZ7 1027 aaPredicted RBP15.11■□□□□ 0.01
PUDP-201ENST00000381077 SH3TC1Q8TE82 1336 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms