RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 ZGPATQ8N5A5 531 aaKnown RBP16.1■□□□□ 0.17
LCMT1-201ENST00000380962 A0A087WZG4 1122 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 NBPF26B4DH59 902 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 ATP5JP18859 108 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 NBPF14Q5TI25 921 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 NBPF10Q6P3W6 841 aaKnown RBP16.09■□□□□ 0.17
LCMT1-201ENST00000380962 CWC27Q6UX04 472 aaKnown RBP16.09■□□□□ 0.17
LCMT1-201ENST00000380962 NBPF15Q8N660 670 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 CCDC191Q8NCU4 936 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 TTC14Q96N46 770 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 GPR108Q9NPR9 543 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 CWC25Q9NXE8 425 aaPredicted RBP16.09■□□□□ 0.17
LCMT1-201ENST00000380962 LRP6O75581 1613 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 JCADQ9P266 1359 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 BRD1O95696 1058 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 EVA1CP58658 441 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 UBE3BQ7Z3V4 1068 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 ATG3Q9NT62 314 aa16.09■□□□□ 0.17
LCMT1-201ENST00000380962 CCDC171Q6TFL3 1326 aa16.08■□□□□ 0.17
LCMT1-201ENST00000380962 TNNI3KQ59H18 835 aa16.08■□□□□ 0.16
LCMT1-201ENST00000380962 FPGT-TNNI3KV9GXZ4 949 aa16.08■□□□□ 0.16
LCMT1-201ENST00000380962 COL14A1Q05707 1796 aaKnown RBP16.08■□□□□ 0.16
LCMT1-201ENST00000380962 TOM1O60784 492 aa16.07■□□□□ 0.16
LCMT1-201ENST00000380962 TRIM28Q13263 835 aaKnown RBP16.07■□□□□ 0.16
LCMT1-201ENST00000380962 ZSCAN31Q96LW9 406 aaPredicted RBP16.07■□□□□ 0.16
LCMT1-201ENST00000380962 FBXO3Q9UK99 471 aa16.07■□□□□ 0.16
LCMT1-201ENST00000380962 LIMCH1Q9UPQ0 1083 aa16.07■□□□□ 0.16
LCMT1-201ENST00000380962 ZDHHC9Q9Y397 364 aa16.07■□□□□ 0.16
LCMT1-201ENST00000380962 DISP2A7MBM2 1401 aa16.07■□□□□ 0.16
LCMT1-201ENST00000380962 MED23Q9ULK4 1368 aa16.06■□□□□ 0.16
LCMT1-201ENST00000380962 PLCH1Q4KWH8 1693 aa16.06■□□□□ 0.16
LCMT1-201ENST00000380962 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
LCMT1-201ENST00000380962 ZKSCAN1P17029 563 aaPredicted RBP16.06■□□□□ 0.16
LCMT1-201ENST00000380962 HSPA1LP34931 641 aa16.06■□□□□ 0.16
LCMT1-201ENST00000380962 TJP1Q07157 1748 aa16.06■□□□□ 0.16
LCMT1-201ENST00000380962 NECTIN1Q15223 517 aa16.06■□□□□ 0.16
LCMT1-201ENST00000380962 VPS53Q5VIR6 699 aa16.06■□□□□ 0.16
LCMT1-201ENST00000380962 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
LCMT1-201ENST00000380962 CCDC8Q9H0W5 538 aaPredicted RBP16.06■□□□□ 0.16
LCMT1-201ENST00000380962 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
LCMT1-201ENST00000380962 TOGARAM1Q9Y4F4 1720 aa16.06■□□□□ 0.16
LCMT1-201ENST00000380962 COL22A1Q8NFW1 1626 aaPredicted RBP16.06■□□□□ 0.16
LCMT1-201ENST00000380962 FOXO4P98177 505 aa16.05■□□□□ 0.16
LCMT1-201ENST00000380962 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
LCMT1-201ENST00000380962 GZF1Q9H116 711 aaPredicted RBP16.05■□□□□ 0.16
LCMT1-201ENST00000380962 SIL1Q9H173 461 aa16.05■□□□□ 0.16
LCMT1-201ENST00000380962 ZSWIM6Q9HCJ5 1215 aa16.05■□□□□ 0.16
LCMT1-201ENST00000380962 SH2B1Q9NRF2 756 aaPredicted RBP16.05■□□□□ 0.16
LCMT1-201ENST00000380962 LMBRD1Q9NUN5 540 aa16.05■□□□□ 0.16
LCMT1-201ENST00000380962 HMG20BQ9P0W2 317 aa16.05■□□□□ 0.16
LCMT1-201ENST00000380962 DDX49Q9Y6V7 483 aaKnown RBP16.05■□□□□ 0.16
LCMT1-201ENST00000380962 AHDC1Q5TGY3 1603 aaPredicted RBP16.05■□□□□ 0.16
LCMT1-201ENST00000380962 ATP5J2-PTCD1G3V325 749 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 PTCD1O75127 700 aaKnown RBP16.04■□□□□ 0.16
LCMT1-201ENST00000380962 CIAO1O76071 339 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 PSMA5P28066 241 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 PIP4K2BP78356 416 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 RNF20Q5VTR2 975 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 FSD1Q9BTV5 496 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 ISCA1Q9BUE6 129 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 ALDH8A1Q9H2A2 487 aaPredicted RBP16.04■□□□□ 0.16
LCMT1-201ENST00000380962 TLR7Q9NYK1 1049 aaKnown RBP16.04■□□□□ 0.16
LCMT1-201ENST00000380962 BRPF3Q9ULD4 1205 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.04■□□□□ 0.16
LCMT1-201ENST00000380962 WDR33Q9C0J8 1336 aaKnown RBP16.04■□□□□ 0.16
LCMT1-201ENST00000380962 XRCC6P12956 609 aaKnown RBP eCLIP16.04■□□□□ 0.16
LCMT1-201ENST00000380962 IL15P40933 162 aaPredicted RBP16.04■□□□□ 0.16
LCMT1-201ENST00000380962 NMIQ13287 307 aaPredicted RBP16.04■□□□□ 0.16
LCMT1-201ENST00000380962 PKP1Q13835 747 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 TSGA10IPQ3SY00 556 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 TTLL7Q6ZT98 887 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 STRN4Q9NRL3 753 aa16.04■□□□□ 0.16
LCMT1-201ENST00000380962 DBNLQ9UJU6 430 aaKnown RBP16.04■□□□□ 0.16
LCMT1-201ENST00000380962 A1BGP04217 495 aa16.03■□□□□ 0.16
LCMT1-201ENST00000380962 PIP4K2AP48426 406 aaPredicted RBP16.03■□□□□ 0.16
LCMT1-201ENST00000380962 PTH1RQ03431 593 aa16.03■□□□□ 0.16
LCMT1-201ENST00000380962 TFCP2Q12800 502 aa16.03■□□□□ 0.16
LCMT1-201ENST00000380962 LMBR1LQ6UX01 489 aa16.03■□□□□ 0.16
LCMT1-201ENST00000380962 DDX54Q8TDD1 881 aaKnown RBP16.03■□□□□ 0.16
LCMT1-201ENST00000380962 HAUS7Q99871 368 aa16.03■□□□□ 0.16
LCMT1-201ENST00000380962 BOLA2Q9H3K6 86 aa16.03■□□□□ 0.16
LCMT1-201ENST00000380962 GRPEL1Q9HAV7 217 aa16.03■□□□□ 0.16
LCMT1-201ENST00000380962 CYP46A1Q9Y6A2 500 aa16.03■□□□□ 0.16
LCMT1-201ENST00000380962 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.03■□□□□ 0.16
LCMT1-201ENST00000380962 RPAP1Q9BWH6 1393 aaPredicted RBP16.02■□□□□ 0.16
LCMT1-201ENST00000380962 MBD3O95983 291 aa16.02■□□□□ 0.15
LCMT1-201ENST00000380962 AK2P54819 239 aa16.02■□□□□ 0.15
LCMT1-201ENST00000380962 ZNF445P59923 1031 aa16.02■□□□□ 0.15
LCMT1-201ENST00000380962 KLHDC4Q8TBB5 520 aa16.02■□□□□ 0.15
LCMT1-201ENST00000380962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.02■□□□□ 0.15
LCMT1-201ENST00000380962 PLA2G12BQ9BX93 195 aa16.02■□□□□ 0.15
LCMT1-201ENST00000380962 RBM8AQ9Y5S9 174 aaKnown RBP16.02■□□□□ 0.15
LCMT1-201ENST00000380962 STARD3NLO95772 234 aa16.01■□□□□ 0.15
LCMT1-201ENST00000380962 CASTP20810 708 aaKnown RBP16.01■□□□□ 0.15
LCMT1-201ENST00000380962 TCIRG1Q13488 830 aa16.01■□□□□ 0.15
LCMT1-201ENST00000380962 ANKRD1Q15327 319 aa16.01■□□□□ 0.15
LCMT1-201ENST00000380962 USPL1Q5W0Q7 1092 aa16.01■□□□□ 0.15
LCMT1-201ENST00000380962 CREB3L3Q68CJ9 461 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms