RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 G3BP1Q13283 466 aaKnown RBP eCLIP23.49■■□□□ 1.353e-7■■■■□ 19.5
GMDS-201ENST00000380805 RBM42Q9BTD8 480 aaKnown RBP23.49■■□□□ 1.35
GMDS-201ENST00000380805 ATG3Q9NT62 314 aa23.49■■□□□ 1.35
GMDS-201ENST00000380805 CICQ96RK0 1608 aaPredicted RBP23.49■■□□□ 1.35
GMDS-201ENST00000380805 CNTROBQ8N137 903 aa23.48■■□□□ 1.35
GMDS-201ENST00000380805 GPATCH3Q96I76 525 aa23.48■■□□□ 1.35
GMDS-201ENST00000380805 A0A087WZG4 1122 aa23.47■■□□□ 1.35
GMDS-201ENST00000380805 RXRBP28702 533 aa23.47■■□□□ 1.35
GMDS-201ENST00000380805 UBE3BQ7Z3V4 1068 aa23.47■■□□□ 1.35
GMDS-201ENST00000380805 ATP5J2-PTCD1G3V325 749 aa23.47■■□□□ 1.35
GMDS-201ENST00000380805 ONECUT3O60422 494 aaPredicted RBP23.47■■□□□ 1.35
GMDS-201ENST00000380805 ANAPC15P60006 121 aa23.47■■□□□ 1.35
GMDS-201ENST00000380805 CCDC191Q8NCU4 936 aa23.47■■□□□ 1.35
GMDS-201ENST00000380805 ASAP1Q9ULH1 1129 aa23.47■■□□□ 1.35
GMDS-201ENST00000380805 CIZ1Q9ULV3 898 aaPredicted RBP23.47■■□□□ 1.35
GMDS-201ENST00000380805 EXOC5O00471 708 aa23.46■■□□□ 1.35
GMDS-201ENST00000380805 FRAT2O75474 233 aaPredicted RBP23.46■■□□□ 1.35
GMDS-201ENST00000380805 CWC25Q9NXE8 425 aaPredicted RBP23.46■■□□□ 1.35
GMDS-201ENST00000380805 ANKRD36CQ5JPF3 1778 aa23.46■■□□□ 1.35
GMDS-201ENST00000380805 IFIT2P09913 472 aaKnown RBP23.45■■□□□ 1.34
GMDS-201ENST00000380805 IL27Q8NEV9 243 aa23.45■■□□□ 1.34
GMDS-201ENST00000380805 PTPN12Q05209 780 aaKnown RBP23.45■■□□□ 1.34
GMDS-201ENST00000380805 EAF2Q96CJ1 260 aaPredicted RBP23.45■■□□□ 1.34
GMDS-201ENST00000380805 A0A0G2JS52 829 aa23.44■■□□□ 1.34
GMDS-201ENST00000380805 TRIM28Q13263 835 aaKnown RBP23.44■■□□□ 1.34
GMDS-201ENST00000380805 AACSQ86V21 672 aa23.44■■□□□ 1.34
GMDS-201ENST00000380805 ISCA1Q9BUE6 129 aa23.44■■□□□ 1.34
GMDS-201ENST00000380805 FOXO4P98177 505 aa23.43■■□□□ 1.34
GMDS-201ENST00000380805 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.43■■□□□ 1.34
GMDS-201ENST00000380805 SGSM2O43147 1006 aa23.42■■□□□ 1.34
GMDS-201ENST00000380805 STARD3NLO95772 234 aa23.42■■□□□ 1.34
GMDS-201ENST00000380805 DNAJC10Q8IXB1 793 aa23.42■■□□□ 1.34
GMDS-201ENST00000380805 SEPT12Q8IYM1 358 aa23.42■■□□□ 1.34
GMDS-201ENST00000380805 THSD7AQ9UPZ6 1657 aa23.42■■□□□ 1.34
GMDS-201ENST00000380805 MCCP23508 829 aa23.42■■□□□ 1.34
GMDS-201ENST00000380805 RREB1Q92766 1687 aa23.41■■□□□ 1.34
GMDS-201ENST00000380805 IL25Q9H293 177 aa23.41■■□□□ 1.34
GMDS-201ENST00000380805 ST18O60284 1047 aa23.4■■□□□ 1.34
GMDS-201ENST00000380805 SPRYD3Q8NCJ5 442 aa23.4■■□□□ 1.34
GMDS-201ENST00000380805 KLHDC4Q8TBB5 520 aa23.4■■□□□ 1.34
GMDS-201ENST00000380805 EVI5LQ96CN4 794 aa23.4■■□□□ 1.34
GMDS-201ENST00000380805 ZBTB3Q9H5J0 574 aa23.4■■□□□ 1.34
GMDS-201ENST00000380805 ANO2Q9NQ90 1003 aa23.4■■□□□ 1.34
GMDS-201ENST00000380805 TCIRG1Q13488 830 aa23.39■■□□□ 1.34
GMDS-201ENST00000380805 DDB1Q16531 1140 aa23.39■■□□□ 1.34
GMDS-201ENST00000380805 RAD50Q92878 1312 aa23.39■■□□□ 1.34
GMDS-201ENST00000380805 SIL1Q9H173 461 aa23.39■■□□□ 1.33
GMDS-201ENST00000380805 MAP4K4O95819 1239 aaPredicted RBP23.38■■□□□ 1.33
GMDS-201ENST00000380805 LMBR1LQ6UX01 489 aa23.38■■□□□ 1.33
GMDS-201ENST00000380805 JARID2Q92833 1246 aaPredicted RBP23.38■■□□□ 1.33
GMDS-201ENST00000380805 SLC4A9Q96Q91 983 aa23.38■■□□□ 1.33
GMDS-201ENST00000380805 CYP19A1P11511 503 aaPredicted RBP23.37■■□□□ 1.33
GMDS-201ENST00000380805 HSPA4P34932 840 aa23.37■■□□□ 1.33
GMDS-201ENST00000380805 MAP3K15Q6ZN16 1313 aa23.36■■□□□ 1.33
GMDS-201ENST00000380805 SNRKQ9NRH2 765 aa23.36■■□□□ 1.33
GMDS-201ENST00000380805 BRWD3Q6RI45 1802 aa23.36■■□□□ 1.33
GMDS-201ENST00000380805 ZNF831Q5JPB2 1677 aa23.36■■□□□ 1.33
GMDS-201ENST00000380805 DEKP35659 375 aaKnown RBP23.36■■□□□ 1.33
GMDS-201ENST00000380805 TNNI3KQ59H18 835 aa23.36■■□□□ 1.33
GMDS-201ENST00000380805 KIF6Q6ZMV9 814 aa23.36■■□□□ 1.33
GMDS-201ENST00000380805 LSG1Q9H089 658 aaKnown RBP23.36■■□□□ 1.33
GMDS-201ENST00000380805 TLR7Q9NYK1 1049 aaKnown RBP23.36■■□□□ 1.33
GMDS-201ENST00000380805 FPGT-TNNI3KV9GXZ4 949 aa23.36■■□□□ 1.33
GMDS-201ENST00000380805 NUP98P52948 1817 aa23.36■■□□□ 1.33
GMDS-201ENST00000380805 FAM182BQ5T319 152 aa23.35■■□□□ 1.33
GMDS-201ENST00000380805 RUFY2Q8WXA3 655 aa23.35■■□□□ 1.33
GMDS-201ENST00000380805 PLA2G12BQ9BX93 195 aa23.35■■□□□ 1.33
GMDS-201ENST00000380805 CCDC8Q9H0W5 538 aaPredicted RBP23.35■■□□□ 1.33
GMDS-201ENST00000380805 PALD1Q9ULE6 856 aa23.35■■□□□ 1.33
GMDS-201ENST00000380805 HIP1O00291 1037 aa23.34■■□□□ 1.33
GMDS-201ENST00000380805 MCM2P49736 904 aa23.34■■□□□ 1.33
GMDS-201ENST00000380805 MARCH10Q8NA82 808 aaPredicted RBP23.34■■□□□ 1.33
GMDS-201ENST00000380805 GPR108Q9NPR9 543 aa23.34■■□□□ 1.33
GMDS-201ENST00000380805 RFX7Q2KHR2 1363 aa23.34■■□□□ 1.33
GMDS-201ENST00000380805 RAB3GAP1Q15042 981 aa23.33■■□□□ 1.33
GMDS-201ENST00000380805 GIGYF2Q6Y7W6 1299 aaKnown RBP23.33■■□□□ 1.33
GMDS-201ENST00000380805 EP400Q96L91 3159 aa23.33■■□□□ 1.33
GMDS-201ENST00000380805 MYH3P11055 1940 aa23.33■■□□□ 1.32
GMDS-201ENST00000380805 PCCAP05165 728 aaPredicted RBP23.33■■□□□ 1.32
GMDS-201ENST00000380805 ATP5JP18859 108 aa23.33■■□□□ 1.32
GMDS-201ENST00000380805 TFCP2Q12800 502 aa23.33■■□□□ 1.32
GMDS-201ENST00000380805 DIAPH3Q9NSV4 1193 aa23.33■■□□□ 1.32
GMDS-201ENST00000380805 DBNLQ9UJU6 430 aaKnown RBP23.33■■□□□ 1.32
GMDS-201ENST00000380805 CIAO1O76071 339 aa23.32■■□□□ 1.32
GMDS-201ENST00000380805 PRIM1P49642 420 aaKnown RBP23.32■■□□□ 1.32
GMDS-201ENST00000380805 ATG9AQ7Z3C6 839 aa23.32■■□□□ 1.32
GMDS-201ENST00000380805 KAT6BQ8WYB5 2073 aa23.32■■□□□ 1.32
GMDS-201ENST00000380805 CDHR2Q9BYE9 1310 aa23.31■■□□□ 1.32
GMDS-201ENST00000380805 HSP90AA1P07900 732 aaKnown RBP23.31■■□□□ 1.32
GMDS-201ENST00000380805 MCM4P33991 863 aa23.31■■□□□ 1.32
GMDS-201ENST00000380805 HSP90AB3PQ58FF7 597 aa23.31■■□□□ 1.32
GMDS-201ENST00000380805 FBXO3Q9UK99 471 aa23.31■■□□□ 1.32
GMDS-201ENST00000380805 IL6STP40189 918 aaPredicted RBP23.3■■□□□ 1.32
GMDS-201ENST00000380805 CWC27Q6UX04 472 aaKnown RBP23.3■■□□□ 1.32
GMDS-201ENST00000380805 SPEF2Q9C093 1822 aa23.3■■□□□ 1.32
GMDS-201ENST00000380805 IL15P40933 162 aaPredicted RBP23.3■■□□□ 1.32
GMDS-201ENST00000380805 KRT27Q7Z3Y8 459 aa23.3■■□□□ 1.32
GMDS-201ENST00000380805 ZBTB38Q8NAP3 1195 aaPredicted RBP23.3■■□□□ 1.32
GMDS-201ENST00000380805 KCNB2Q92953 911 aa23.29■■□□□ 1.32
GMDS-201ENST00000380805 ZBTB1Q9Y2K1 713 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms