RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 BCORL1Q5H9F3 1711 aa14.82□□□□□ -0.04
DNMT3A-204ENST00000380756 PHAXQ9H814 394 aaKnown RBP14.82□□□□□ -0.04
DNMT3A-204ENST00000380756 USP16Q9Y5T5 823 aa14.82□□□□□ -0.04
DNMT3A-204ENST00000380756 URI1O94763 535 aaPredicted RBP14.82□□□□□ -0.04
DNMT3A-204ENST00000380756 EDC4Q6P2E9 1401 aaKnown RBP14.82□□□□□ -0.04
DNMT3A-204ENST00000380756 TOP1P11387 765 aaKnown RBP14.82□□□□□ -0.04
DNMT3A-204ENST00000380756 SETQ01105 290 aaPredicted RBP14.82□□□□□ -0.04
DNMT3A-204ENST00000380756 TMCO3Q6UWJ1 677 aa14.82□□□□□ -0.04
DNMT3A-204ENST00000380756 SNRKQ9NRH2 765 aa14.82□□□□□ -0.04
DNMT3A-204ENST00000380756 ZNHIT6Q9NWK9 470 aaKnown RBP14.82□□□□□ -0.04
DNMT3A-204ENST00000380756 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.82□□□□□ -0.04
DNMT3A-204ENST00000380756 CPA1P15085 419 aa14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 CGNQ9P2M7 1197 aaKnown RBP14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 CFAP65Q6ZU64 1925 aaKnown RBP14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 ZSCAN12O43309 604 aa14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 POLR3DP05423 398 aaPredicted RBP14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 HSPA2P54652 639 aa14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 TYRO3Q06418 890 aa14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 NMIQ13287 307 aaPredicted RBP14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 NOM1Q5C9Z4 860 aaKnown RBP14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 PLEKHF1Q96S99 279 aa14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 SYNMO15061 1565 aa14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 ERLIN1O75477 346 aa14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 HAND2P61296 217 aa14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 IFIT5Q13325 482 aaKnown RBP14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 LRP2BPQ9P2M1 347 aa14.81□□□□□ -0.04
DNMT3A-204ENST00000380756 CREB3L3Q68CJ9 461 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 COPS6Q7L5N1 327 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 TMC6Q7Z403 805 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 ANKRD24Q8TF21 1146 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 XAGE3Q8WTP9 111 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 DNAJC25Q9H1X3 360 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 ZBTB3Q9H5J0 574 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 ARHGAP29Q52LW3 1261 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 LEKR1Q6ZMV7 388 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 NAPBQ9H115 298 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 PRDM15P57071 1507 aaPredicted RBP14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 KDM5DQ9BY66 1539 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 PNMA6EA0A0J9YXQ4 647 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 STIM1Q13586 685 aa14.8□□□□□ -0.04
DNMT3A-204ENST00000380756 CWF19L2Q2TBE0 894 aaKnown RBP14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 GAS2L3Q86XJ1 694 aa14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 CCDC82Q8N4S0 544 aa14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 PAXBP1Q9Y5B6 917 aa14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 STARD3NLO95772 234 aa14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 AKAP4Q5JQC9 854 aa14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 IFNL2Q8IZJ0 200 aa14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 MAP3K5Q99683 1374 aa14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 ABCA8O94911 1581 aa14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 EPB41L2O43491 1005 aaKnown RBP14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 SNRPA1P09661 255 aaKnown RBP14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 TMEM63CQ9P1W3 806 aa14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 SAMD9LQ8IVG5 1584 aa14.79□□□□□ -0.04
DNMT3A-204ENST00000380756 FSD2A1L4K1 749 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 CEP135Q66GS9 1140 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 CNNM3Q8NE01 707 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 CEP131Q9UPN4 1083 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 SGSM2O43147 1006 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 KLHL10Q6JEL2 608 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 Q6ZUG5 572 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 ABCF2Q9UG63 623 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 ERICH4A6NGS2 130 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 SKILP12757 684 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 MCMDC2Q4G0Z9 681 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 CCDC196A0A1B0GTZ2 297 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 EIF3JO75822 258 aaKnown RBP14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 SLC39A6Q13433 755 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 RUFY3Q7L099 469 aa14.78□□□□□ -0.04
DNMT3A-204ENST00000380756 CCDC171Q6TFL3 1326 aa14.77□□□□□ -0.04
DNMT3A-204ENST00000380756 CWC25Q9NXE8 425 aaPredicted RBP14.77□□□□□ -0.04
DNMT3A-204ENST00000380756 RAI14Q9P0K7 980 aa14.77□□□□□ -0.04
DNMT3A-204ENST00000380756 KIF24Q5T7B8 1368 aa14.77□□□□□ -0.04
DNMT3A-204ENST00000380756 SNW1Q13573 536 aaKnown RBP14.77□□□□□ -0.04
DNMT3A-204ENST00000380756 RAB11FIP4Q86YS3 637 aa14.77□□□□□ -0.04
DNMT3A-204ENST00000380756 BRD1O95696 1058 aa14.77□□□□□ -0.05
DNMT3A-204ENST00000380756 EPS15P42566 896 aa14.77□□□□□ -0.05
DNMT3A-204ENST00000380756 AXDND1Q5T1B0 1012 aaPredicted RBP14.77□□□□□ -0.05
DNMT3A-204ENST00000380756 CADPS2Q86UW7 1296 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 CDK5RAP3Q96JB5 506 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 TRIM34Q9BYJ4 488 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 USP19O94966 1318 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 PKP1Q13835 747 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 ISM2Q6H9L7 571 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 LMBR1LQ6UX01 489 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 SNX14Q9Y5W7 946 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 SLC12A7Q9Y666 1083 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 PLXNC1O60486 1568 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 GOLGA8AA7E2F4 631 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 IFIT3O14879 490 aaKnown RBP14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 PTGS1P23219 599 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 RAD50Q92878 1312 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 RTL1A6NKG5 1358 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 IARSP41252 1262 aaKnown RBP14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 MICU3Q86XE3 530 aa14.76□□□□□ -0.05
DNMT3A-204ENST00000380756 KLF18A0A0U1RQI7 1052 aa14.75□□□□□ -0.05
DNMT3A-204ENST00000380756 NCOA7Q8NI08 942 aa14.75□□□□□ -0.05
DNMT3A-204ENST00000380756 MRPS27Q92552 414 aaKnown RBP14.75□□□□□ -0.05
DNMT3A-204ENST00000380756 AOX1Q06278 1338 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms