RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CCDC8Q9H0W5 538 aaPredicted RBP15.24■□□□□ 0.03
VPS16-202ENST00000380445 TMOD3Q9NYL9 352 aa15.24■□□□□ 0.03
VPS16-202ENST00000380445 GOLGA6L3A6NEY3 463 aa15.24■□□□□ 0.03
VPS16-202ENST00000380445 BAG4O95429 457 aaKnown RBP15.24■□□□□ 0.03
VPS16-202ENST00000380445 GZF1Q9H116 711 aaPredicted RBP15.24■□□□□ 0.03
VPS16-202ENST00000380445 CWC25Q9NXE8 425 aaPredicted RBP15.24■□□□□ 0.03
VPS16-202ENST00000380445 ISY1Q9ULR0 285 aaKnown RBP15.24■□□□□ 0.03
VPS16-202ENST00000380445 TNS2Q63HR2 1409 aa15.24■□□□□ 0.03
VPS16-202ENST00000380445 H7C1W4 665 aa15.23■□□□□ 0.03
VPS16-202ENST00000380445 PTPN12Q05209 780 aaKnown RBP15.23■□□□□ 0.03
VPS16-202ENST00000380445 SHANK3Q9BYB0 1731 aa15.23■□□□□ 0.03
VPS16-202ENST00000380445 RFX5P48382 616 aaPredicted RBP15.23■□□□□ 0.03
VPS16-202ENST00000380445 CASP7P55210 303 aa15.23■□□□□ 0.03
VPS16-202ENST00000380445 ZGPATQ8N5A5 531 aaKnown RBP15.23■□□□□ 0.03
VPS16-202ENST00000380445 CCDC191Q8NCU4 936 aa15.23■□□□□ 0.03
VPS16-202ENST00000380445 KLHDC4Q8TBB5 520 aa15.22■□□□□ 0.03
VPS16-202ENST00000380445 SNX14Q9Y5W7 946 aa15.22■□□□□ 0.03
VPS16-202ENST00000380445 A1BGP04217 495 aa15.21■□□□□ 0.03
VPS16-202ENST00000380445 UPF3BQ9BZI7 483 aaKnown RBP15.21■□□□□ 0.03
VPS16-202ENST00000380445 BTG4Q9NY30 223 aa15.21■□□□□ 0.03
VPS16-202ENST00000380445 TTLL7Q6ZT98 887 aa15.21■□□□□ 0.03
VPS16-202ENST00000380445 FSD2A1L4K1 749 aa15.2■□□□□ 0.02
VPS16-202ENST00000380445 TNNI3KQ59H18 835 aa15.2■□□□□ 0.02
VPS16-202ENST00000380445 FPGT-TNNI3KV9GXZ4 949 aa15.2■□□□□ 0.02
VPS16-202ENST00000380445 ATP5JP18859 108 aa15.2■□□□□ 0.02
VPS16-202ENST00000380445 LMBR1LQ6UX01 489 aa15.2■□□□□ 0.02
VPS16-202ENST00000380445 JARID2Q92833 1246 aaPredicted RBP15.2■□□□□ 0.02
VPS16-202ENST00000380445 BOLA2Q9H3K6 86 aa15.2■□□□□ 0.02
VPS16-202ENST00000380445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.2■□□□□ 0.02
VPS16-202ENST00000380445 FSD1Q9BTV5 496 aa15.19■□□□□ 0.02
VPS16-202ENST00000380445 TLR7Q9NYK1 1049 aaKnown RBP15.19■□□□□ 0.02
VPS16-202ENST00000380445 NUP188Q5SRE5 1749 aa15.19■□□□□ 0.02
VPS16-202ENST00000380445 ZKSCAN1P17029 563 aaPredicted RBP15.19■□□□□ 0.02
VPS16-202ENST00000380445 SNRKQ9NRH2 765 aa15.19■□□□□ 0.02
VPS16-202ENST00000380445 FOXO4P98177 505 aa15.19■□□□□ 0.02
VPS16-202ENST00000380445 TFCP2Q12800 502 aa15.19■□□□□ 0.02
VPS16-202ENST00000380445 TM6SF1Q9BZW5 370 aa15.19■□□□□ 0.02
VPS16-202ENST00000380445 CCDC171Q6TFL3 1326 aa15.18■□□□□ 0.02
VPS16-202ENST00000380445 STARD3NLO95772 234 aa15.18■□□□□ 0.02
VPS16-202ENST00000380445 HSP90AA2PQ14568 343 aaPredicted RBP15.18■□□□□ 0.02
VPS16-202ENST00000380445 KLHL40Q2TBA0 621 aa15.18■□□□□ 0.02
VPS16-202ENST00000380445 CERKQ8TCT0 537 aa15.18■□□□□ 0.02
VPS16-202ENST00000380445 KCNB2Q92953 911 aa15.18■□□□□ 0.02
VPS16-202ENST00000380445 ATG3Q9NT62 314 aa15.18■□□□□ 0.02
VPS16-202ENST00000380445 CHMP3Q9Y3E7 222 aa15.18■□□□□ 0.02
VPS16-202ENST00000380445 COL14A1Q05707 1796 aaKnown RBP15.18■□□□□ 0.02
VPS16-202ENST00000380445 MCTP1Q6DN14 999 aa15.18■□□□□ 0.02
VPS16-202ENST00000380445 ZBTB3Q9H5J0 574 aa15.18■□□□□ 0.02
VPS16-202ENST00000380445 NMIQ13287 307 aaPredicted RBP15.17■□□□□ 0.02
VPS16-202ENST00000380445 PKP1Q13835 747 aa15.17■□□□□ 0.02
VPS16-202ENST00000380445 RASEFQ8IZ41 740 aa15.17■□□□□ 0.02
VPS16-202ENST00000380445 TTC14Q96N46 770 aa15.17■□□□□ 0.02
VPS16-202ENST00000380445 DDX49Q9Y6V7 483 aaKnown RBP15.17■□□□□ 0.02
VPS16-202ENST00000380445 KCNJ4P48050 445 aa15.17■□□□□ 0.02
VPS16-202ENST00000380445 PTH1RQ03431 593 aa15.17■□□□□ 0.02
VPS16-202ENST00000380445 NECTIN1Q15223 517 aa15.17■□□□□ 0.02
VPS16-202ENST00000380445 RNF20Q5VTR2 975 aa15.17■□□□□ 0.02
VPS16-202ENST00000380445 NOL8Q76FK4 1167 aaKnown RBP15.17■□□□□ 0.02
VPS16-202ENST00000380445 MAP4K1Q92918 833 aa15.17■□□□□ 0.02
VPS16-202ENST00000380445 GPR108Q9NPR9 543 aa15.17■□□□□ 0.02
VPS16-202ENST00000380445 DBNLQ9UJU6 430 aaKnown RBP15.17■□□□□ 0.02
VPS16-202ENST00000380445 LIMCH1Q9UPQ0 1083 aa15.17■□□□□ 0.02
VPS16-202ENST00000380445 TOGARAM1Q9Y4F4 1720 aa15.16■□□□□ 0.02
VPS16-202ENST00000380445 RFX7Q2KHR2 1363 aa15.16■□□□□ 0.02
VPS16-202ENST00000380445 MRE11P49959 708 aa15.16■□□□□ 0.02
VPS16-202ENST00000380445 KIF6Q6ZMV9 814 aa15.16■□□□□ 0.02
VPS16-202ENST00000380445 CASTP20810 708 aaKnown RBP15.16■□□□□ 0.02
VPS16-202ENST00000380445 IL15P40933 162 aaPredicted RBP15.16■□□□□ 0.02
VPS16-202ENST00000380445 TRIM28Q13263 835 aaKnown RBP15.16■□□□□ 0.02
VPS16-202ENST00000380445 TCIRG1Q13488 830 aa15.16■□□□□ 0.02
VPS16-202ENST00000380445 PRPF40BQ6NWY9 871 aaKnown RBP15.16■□□□□ 0.02
VPS16-202ENST00000380445 TICAM2Q86XR7 235 aa15.16■□□□□ 0.02
VPS16-202ENST00000380445 PIGBQ92521 554 aa15.16■□□□□ 0.02
VPS16-202ENST00000380445 A0A0U1RQG5 324 aaPredicted RBP15.15■□□□□ 0.02
VPS16-202ENST00000380445 VPS53Q5VIR6 699 aa15.15■□□□□ 0.02
VPS16-202ENST00000380445 FAM227BQ96M60 508 aa15.15■□□□□ 0.02
VPS16-202ENST00000380445 ISCA1Q9BUE6 129 aa15.15■□□□□ 0.02
VPS16-202ENST00000380445 ZDHHC9Q9Y397 364 aa15.15■□□□□ 0.02
VPS16-202ENST00000380445 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.15■□□□□ 0.02
VPS16-202ENST00000380445 CYP46A1Q9Y6A2 500 aa15.15■□□□□ 0.02
VPS16-202ENST00000380445 BRD1O95696 1058 aa15.15■□□□□ 0.02
VPS16-202ENST00000380445 PSMA5P28066 241 aa15.15■□□□□ 0.02
VPS16-202ENST00000380445 RBM8AQ9Y5S9 174 aaKnown RBP15.15■□□□□ 0.02
VPS16-202ENST00000380445 DISP2A7MBM2 1401 aa15.14■□□□□ 0.01
VPS16-202ENST00000380445 XRCC6P12956 609 aaKnown RBP eCLIP15.14■□□□□ 0.01
VPS16-202ENST00000380445 AK2P54819 239 aa15.14■□□□□ 0.01
VPS16-202ENST00000380445 ZSCAN31Q96LW9 406 aaPredicted RBP15.14■□□□□ 0.01
VPS16-202ENST00000380445 ZSWIM6Q9HCJ5 1215 aa15.14■□□□□ 0.01
VPS16-202ENST00000380445 ASAP1Q9ULH1 1129 aa15.14■□□□□ 0.01
VPS16-202ENST00000380445 EXOC5O00471 708 aa15.14■□□□□ 0.01
VPS16-202ENST00000380445 RRP9O43818 475 aaKnown RBP15.14■□□□□ 0.01
VPS16-202ENST00000380445 CIAO1O76071 339 aa15.14■□□□□ 0.01
VPS16-202ENST00000380445 JAKMIP1Q96N16 626 aaKnown RBP15.14■□□□□ 0.01
VPS16-202ENST00000380445 DNAJC10Q8IXB1 793 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 HAUS7Q99871 368 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 FBXO3Q9UK99 471 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 TJP1Q07157 1748 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 AHDC1Q5TGY3 1603 aaPredicted RBP15.13■□□□□ 0.01
VPS16-202ENST00000380445 A0A0D9SFI3 127 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 CREB3L3Q68CJ9 461 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms